Belongs to the glycosyl hydrolase 18 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g24210 |
| malus_domestica | MD02G1278700.v1.1 MD07G1046800.v1.1 |
| prunus_persica | Prupe.2G041800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0120651 |
| rosa_laevigata | RLG00000018564 |
| rosa_rugosa | Rorug02G0230100 |
| rosa_samantha | Rh2AG286100 Rh2BG297900 Rh2CG275600 Rh2DG311600 |
| rosa_wichuraiana | Rw2G022980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 521 |
| AciI | CCGC | 1 cut(s) | 448 |
| AcoI | YGGCCR | 1 cut(s) | 534 |
| AcsI | RAATTY | 2 cut(s) | 212, 738 |
| AfaI | GTAC | 4 cut(s) | 89, 129, 341, 892 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 336, 363, 778 |
| AflIII | ACRYGT | 1 cut(s) | 503 |
| AgsI | TTSAA | 2 cut(s) | 511, 664 |
| AhlI | ACTAGT | 1 cut(s) | 887 |
| AjnI | CCWGG | 1 cut(s) | 516 |
| AluBI | AGCT | 8 cut(s) | 10, 16, 260, 496, 676, 706, 821, 869 |
| AluI | AGCT | 8 cut(s) | 10, 16, 260, 496, 676, 706, 821, 869 |
| Alw26I | GTCTC | 1 cut(s) | 385 |
| AoxI | GGCC | 2 cut(s) | 534, 666 |
| ApeKI | GCWGC | 1 cut(s) | 257 |
| ApoI | RAATTY | 2 cut(s) | 212, 738 |
| AseI | ATTAAT | 2 cut(s) | 135, 798 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 214, 668 |
| AsuHPI | GGTGA | 6 cut(s) | 88, 210, 394, 611, 758, 817 |
| BalI | TGGCCA | 1 cut(s) | 536 |
| BbvI | GCAGC | 1 cut(s) | 269 |
| BccI | CCATC | 5 cut(s) | 76, 134, 404, 413, 420 |
| BciT130I | CCWGG | 1 cut(s) | 518 |
| BciVI | GTATCC | 1 cut(s) | 222 |
| BcoDI | GTCTC | 1 cut(s) | 385 |
| BcuI | ACTAGT | 1 cut(s) | 887 |
| BfaI | CTAG | 1 cut(s) | 888 |
| BfuI | GTATCC | 1 cut(s) | 222 |
| BisI | GCNGC | 1 cut(s) | 258 |
| BlsI | GCNGC | 1 cut(s) | 259 |
| Bme1390I | CCNGG | 1 cut(s) | 518 |
| BmiI | GGNNCC | 1 cut(s) | 97 |
| BmrFI | CCNGG | 1 cut(s) | 518 |
| BmsI | GCATC | 3 cut(s) | 169, 751, 814 |
| BsaJI | CCNNGG | 2 cut(s) | 517, 531 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 60, 90, 550, 580 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 336, 363, 778 |
| Bse1I | ACTGG | 3 cut(s) | 106, 341, 622 |
| Bse3DI | GCAATG | 2 cut(s) | 540, 573 |
| BseBI | CCWGG | 1 cut(s) | 518 |
| BseDI | CCNNGG | 2 cut(s) | 517, 531 |
| BseGI | GGATG | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 336, 363, 778 |
| BseMI | GCAATG | 2 cut(s) | 540, 573 |
| BseMII | CTCAG | 2 cut(s) | 825, 831 |
| BseNI | ACTGG | 3 cut(s) | 106, 341, 622 |
| BseXI | GCAGC | 1 cut(s) | 269 |
| BshFI | GGCC | 2 cut(s) | 536, 668 |
| BsiSI | CCGG | 1 cut(s) | 36 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 336, 363, 778 |
| BsmAI | GTCTC | 1 cut(s) | 385 |
| BsmI | GAATGC | 1 cut(s) | 44 |
| BsnI | GGCC | 2 cut(s) | 536, 668 |
| Bsp143I | GATC | 2 cut(s) | 748, 810 |
| BspACI | CCGC | 1 cut(s) | 448 |
| BspANI | GGCC | 2 cut(s) | 536, 668 |
| BspCNI | CTCAG | 2 cut(s) | 826, 830 |
| BspLI | GGNNCC | 1 cut(s) | 97 |
| BsrDI | GCAATG | 2 cut(s) | 540, 573 |
| BsrI | ACTGG | 3 cut(s) | 106, 341, 622 |
| BssECI | CCNNGG | 2 cut(s) | 517, 531 |
| BssMI | GATC | 2 cut(s) | 748, 810 |
| Bst2UI | CCWGG | 1 cut(s) | 518 |
| Bst4CI | ACNGT | 3 cut(s) | 455, 549, 562 |
| Bst6I | CTCTTC | 1 cut(s) | 727 |
| BstC8I | GCNNGC | 3 cut(s) | 494, 538, 714 |
| BstDEI | CTNAG | 2 cut(s) | 817, 834 |
| BstDSI | CCRYGG | 1 cut(s) | 531 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 776 |
| BstF5I | GGATG | 1 cut(s) | 342 |
| BstKTI | GATC | 2 cut(s) | 751, 813 |
| BstMAI | GTCTC | 1 cut(s) | 385 |
| BstMBI | GATC | 2 cut(s) | 748, 810 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 179, 476, 542 |
| BstNI | CCWGG | 1 cut(s) | 518 |
| BstNSI | RCATGY | 1 cut(s) | 602 |
| BstSCI | CCNGG | 1 cut(s) | 516 |
| BstV1I | GCAGC | 1 cut(s) | 269 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 419 |
| BsuI | GTATCC | 1 cut(s) | 222 |
| BsuRI | GGCC | 2 cut(s) | 536, 668 |
| BtgI | CCRYGG | 1 cut(s) | 531 |
| BtsCI | GGATG | 1 cut(s) | 342 |
| BtsIMutI | CAGTG | 3 cut(s) | 99, 334, 630 |
| Cac8I | GCNNGC | 3 cut(s) | 494, 538, 714 |
| Csp6I | GTAC | 4 cut(s) | 88, 128, 340, 891 |
| CviAII | CATG | 2 cut(s) | 292, 599 |
| CviQI | GTAC | 4 cut(s) | 88, 128, 340, 891 |
| DdeI | CTNAG | 2 cut(s) | 817, 834 |
| DpnI | GATC | 2 cut(s) | 750, 812 |
| DpnII | GATC | 2 cut(s) | 748, 810 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 521 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 521 |
| EaeI | YGGCCR | 1 cut(s) | 534 |
| Eam1104I | CTCTTC | 1 cut(s) | 727 |
| EarI | CTCTTC | 1 cut(s) | 727 |
| Eco147I | AGGCCT | 1 cut(s) | 668 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 776 |
| EcoRI | GAATTC | 1 cut(s) | 738 |
| EcoRII | CCWGG | 1 cut(s) | 516 |
| FaeI | CATG | 2 cut(s) | 295, 602 |
| FatI | CATG | 2 cut(s) | 291, 598 |
| Fnu4HI | GCNGC | 1 cut(s) | 258 |
| FokI | GGATG | 1 cut(s) | 329 |
| Fsp4HI | GCNGC | 1 cut(s) | 258 |
| FspBI | CTAG | 1 cut(s) | 888 |
| GluI | GCNGC | 1 cut(s) | 258 |
| HaeIII | GGCC | 2 cut(s) | 536, 668 |
| HapII | CCGG | 1 cut(s) | 36 |
| Hin1II | CATG | 2 cut(s) | 295, 602 |
| HindIII | AAGCTT | 1 cut(s) | 867 |
| HinfI | GANTC | 3 cut(s) | 144, 188, 789 |
| HpaII | CCGG | 1 cut(s) | 36 |
| HphI | GGTGA | 6 cut(s) | 88, 210, 394, 611, 758, 817 |
| Hpy166II | GTNNAC | 1 cut(s) | 727 |
| Hpy188I | TCNGA | 2 cut(s) | 358, 835 |
| Hpy188III | TCNNGA | 1 cut(s) | 416 |
| Hpy8I | GTNNAC | 1 cut(s) | 727 |
| HpyAV | CCTTC | 3 cut(s) | 67, 658, 679 |
| HpyCH4III | ACNGT | 3 cut(s) | 455, 549, 562 |
| HpyCH4IV | ACGT | 2 cut(s) | 282, 505 |
| HpyCH4V | TGCA | 6 cut(s) | 44, 182, 257, 486, 545, 578 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 179, 476, 542 |
| HpyF3I | CTNAG | 2 cut(s) | 817, 834 |
| HpySE526I | ACGT | 2 cut(s) | 282, 505 |
| Hsp92II | CATG | 2 cut(s) | 295, 602 |
| Kzo9I | GATC | 2 cut(s) | 748, 810 |
| LmnI | GCTCC | 2 cut(s) | 95, 571 |
| Lsp1109I | GCAGC | 1 cut(s) | 269 |
| LweI | GCATC | 3 cut(s) | 169, 751, 814 |
| MaeI | CTAG | 1 cut(s) | 888 |
| MaeII | ACGT | 2 cut(s) | 282, 505 |
| MalI | GATC | 2 cut(s) | 750, 812 |
| MboI | GATC | 2 cut(s) | 748, 810 |
| MboII | GAAGA | 4 cut(s) | 43, 744, 805, 822 |
| MlsI | TGGCCA | 1 cut(s) | 536 |
| MluCI | AATT | 8 cut(s) | 132, 212, 236, 472, 689, 738, 795, 880 |
| MluNI | TGGCCA | 1 cut(s) | 536 |
| MmeI | TCCRAC | 2 cut(s) | 79, 290 |
| MnlI | CCTC | 4 cut(s) | 62, 728, 772, 849 |
| Mox20I | TGGCCA | 1 cut(s) | 536 |
| MroXI | GAANNNNTTC | 2 cut(s) | 214, 668 |
| MscI | TGGCCA | 1 cut(s) | 536 |
| MseI | TTAA | 4 cut(s) | 135, 239, 767, 798 |
| MslI | CAYNNNNRTG | 2 cut(s) | 417, 530 |
| Msp20I | TGGCCA | 1 cut(s) | 536 |
| MspA1I | CMGCKG | 1 cut(s) | 821 |
| MspI | CCGG | 1 cut(s) | 36 |
| MspR9I | CCNGG | 1 cut(s) | 518 |
| Mva1269I | GAATGC | 1 cut(s) | 44 |
| MvaI | CCWGG | 1 cut(s) | 518 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 179, 476, 542 |
| NdeII | GATC | 2 cut(s) | 748, 810 |
| NlaIII | CATG | 2 cut(s) | 295, 602 |
| NlaIV | GGNNCC | 1 cut(s) | 97 |
| NspI | RCATGY | 1 cut(s) | 602 |
| PceI | AGGCCT | 1 cut(s) | 668 |
| PctI | GAATGC | 1 cut(s) | 44 |
| PdmI | GAANNNNTTC | 2 cut(s) | 214, 668 |
| PfeI | GAWTC | 3 cut(s) | 144, 188, 789 |
| PflFI | GACNNNGTC | 1 cut(s) | 611 |
| PkrI | GCNGC | 1 cut(s) | 259 |
| PshBI | ATTAAT | 2 cut(s) | 135, 798 |
| Psp6I | CCWGG | 1 cut(s) | 516 |
| PspGI | CCWGG | 1 cut(s) | 516 |
| PspN4I | GGNNCC | 1 cut(s) | 97 |
| PsyI | GACNNNGTC | 1 cut(s) | 611 |
| PvuII | CAGCTG | 1 cut(s) | 821 |
| RsaI | GTAC | 4 cut(s) | 89, 129, 341, 892 |
| RsaNI | GTAC | 4 cut(s) | 88, 128, 340, 891 |
| RseI | CAYNNNNRTG | 2 cut(s) | 417, 530 |
| SaqAI | TTAA | 4 cut(s) | 135, 239, 767, 798 |
| SatI | GCNGC | 1 cut(s) | 258 |
| Sau3AI | GATC | 2 cut(s) | 748, 810 |
| ScrFI | CCNGG | 1 cut(s) | 518 |
| SfaNI | GCATC | 3 cut(s) | 169, 751, 814 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 417, 530 |
| SpeI | ACTAGT | 1 cut(s) | 887 |
| Sse9I | AATT | 8 cut(s) | 132, 212, 236, 472, 689, 738, 795, 880 |
| SseBI | AGGCCT | 1 cut(s) | 668 |
| SsiI | CCGC | 1 cut(s) | 448 |
| SspMI | CTAG | 1 cut(s) | 888 |
| StuI | AGGCCT | 1 cut(s) | 668 |
| StyD4I | CCNGG | 1 cut(s) | 516 |
| TaaI | ACNGT | 3 cut(s) | 455, 549, 562 |
| TaiI | ACGT | 2 cut(s) | 285, 508 |
| TaqI | TCGA | 2 cut(s) | 147, 672 |
| TasI | AATT | 8 cut(s) | 132, 212, 236, 472, 689, 738, 795, 880 |
| TatI | WGTACW | 2 cut(s) | 87, 890 |
| TfiI | GAWTC | 3 cut(s) | 144, 188, 789 |
| Tru1I | TTAA | 4 cut(s) | 135, 239, 767, 798 |
| Tru9I | TTAA | 4 cut(s) | 135, 239, 767, 798 |
| TscAI | CASTG | 3 cut(s) | 106, 341, 637 |
| TseI | GCWGC | 1 cut(s) | 257 |
| TspDTI | ATGAA | 5 cut(s) | 37, 143, 148, 201, 735 |
| TspGWI | ACGGA | 3 cut(s) | 222, 520, 744 |
| TspRI | CASTG | 3 cut(s) | 106, 341, 637 |
| Tth111I | GACNNNGTC | 1 cut(s) | 611 |
| VspI | ATTAAT | 2 cut(s) | 135, 798 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 776 |
| XapI | RAATTY | 2 cut(s) | 212, 738 |
| XceI | RCATGY | 1 cut(s) | 602 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 62 |
| XmnI | GAANNNNTTC | 2 cut(s) | 214, 668 |
| XspI | CTAG | 1 cut(s) | 888 |