Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013706

Physical Location & Seq

Genomic Coordinates Forward (+)

500830 .. 504725

Gene Structure 3896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGAACGATATCACGACGGAGACGGAGACGTCAGGATGAAAGGTGGCGGCACTAGTGATAGTGGAGAAGAGGTTGAGTCGTGGGGGACGTGGGAGGAGCTCGTGCTAGCATGCGCGGTGAAGCGTCACGGCGTCAAGGACTGGGAGTCGGTGGCCATGGAAGTCCAAGGCAAGACCTCTCTCCCGCAACTCCACACCACCGCCTACAACTGCAAGCGAAAGTATCAGGATCTCCAGCGCCGATTCCACCAAAGCCATGACGACCAGGATCCTATCCCTTGGCTCCACCACCTCAAAGACCTACGCCTCGCTCAGCTTCGTCAGGACCTCCATCGCTACGACGTCTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTAGAGGAAGAAGAGAAAGACGACGACCCCAAACCAGATCTGGAGGAACGGGACTCCAAGGGACGCACCCGCACCAGATCAGAAGAAGAAGAAGAAGACGACAAAAAGACACCGGACGAACCGGACCGGTTCAAACACGAGAACCAGTCGGTGAACGGCTCCAATTCCACCTGCTCCAAAACCCACGAGCACGAGGAGGGCCACAATCATAAAAAGTCTCCGACTGAACCGGACCCGCTCCCGGCCGGTTCGGCTCAACCCTCCAAAGGCCGCTCGGACTCCGACGACGACTCGGATAAAGGAAGCTGTGAAACCGTCGCCAAGAAGCGCCGGCGGCAAGAGAGGGGCGCGGCGGCGTCGCGTGAGTCGGGGAGTAGTGAGGCGCAGAGTTCGGCGAGCTTGACGCGGAAACGACGTCGTAAATTGGAATTGGAAGACCAGCCTGACGAACGAGTATTGGGGAAATCACAGCCGTTGGCTGCCATTCTGCAGATGATCCGAGCGCATCAGCATGGCTCATTGTTCCAGCGACGGCTTACAAGCCAGGAAAGTGACAAGTATACGAATATGGTCCGGCAGCATGTGGACCTAGAGACGATACAAACAAGGCTCCAAAAGGACTCCTATTCCACGCTCACATTCTACCGGGATCTCCTTCTCCTCTTGTCCAACGCCGTCGTTTTCTTCCCCAAATCATCAACTGAATCCGTCGCTGCTCACCAACTCCGACGCCTTGTCTTGAACGAAATGAAGAAGAGAAATCTAATCACCAGGCCCGACCCTTCATCTGGGCCGTCAGACTCATTGCCCTCCCAAACAACGATTCCAACAGACTCGTTGCTTGCCAAACACAAGTCAACAGCACCCATTATTGTCTGCCGCAAACGAAGCTCAATCTCATCAAAGCCTTCCACCATTGCTCGTAAGGCTAGTACTACTACTGATCACCCAGCAGCAGAAGCGCCAGCAGCTTTTGATATTAAACCACCCAATAACAGTACGAAGACCTCAAACTTAAACAATGTAGATGAAGATAATGGATCGAAAGAGAAACCTGTAACTGGAACCAGAAGCTCAAGAAGGACGACAACTACTCATCATCACGACAATAATGCTGGCGCTTCCTCCACCAAGAAAAAAATTTCAAGCCCTGCGGAAACTCCCAAAGCAGGTAAGAAGAGGAAAACCCCAGAGCCAGCGACAGCATCGGACAAAAAGAGAAGTGGCGCAGCGGCAGCGGCGGCCGATTTCCTGAAAAGAATAAAGCGTAATTCTCCTGCGCAGCAGAAATTGAAATTGAACGGTGGGACTGGCTCTAGTACAAGTACTAGAGGTGCAGAGCAGAAGAAGAGGGGAGCTAATAAGACTGACAAGGTTAAAGGAAGGGTGTCAAGGCAAAGTGGCGGTGAAAATAAGAAACAAGTGAAAGAAGAAAGCAGTCCATCCAAGCGAAGTATAGGAAGACCGTCCAAGAGGGCAGCTGAGACAGCAGCGGCTGCCAATGTAGTTTCACCGAAGCGATCAAGGGAAAATGGGGGGAAGCAGCAGCAAGAATCTTCTAAGCGGCCCAAAAAACGATCCCGAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain Myb_DNA-binding

Protein Analysis

655

Amino Acids

72.89

Weight (kDa)

9.78

Isoelectric Point (pI)

67.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	27 - 76	9.9e-06	Myb-like DNA-binding domain
Bromodomain	PF00439	287 - 366	2.3e-09	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013706)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g00180 FvH4_7g00180
malus_domestica	MD02G1318400.v1.1 MD07G1002900.v1.1 MD07G1247400.v1.1
prunus_persica	Prupe.2G004300_v2.0.a1
pyrus_communis	pycom02g26660 pycom07g00290
rosa_chinensis	RchiOBHm_Chr1g0313431
rosa_laevigata	RLG00000030797
rosa_roxburghii	Rroxscaffold_4G00332190
rosa_rugosa	RorugPtG0005000.1
rosa_samantha	Rh1AG003600 Rh1BG000500 Rh1CG001100 Rh1CG007900 Rh1DG003400
rosa_wichuraiana	Rw1G000230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	557
AasI	GACNNNNNNGTC	1 cut(s)	29
AatII	GACGTC	3 cut(s)	33, 345, 796
Acc16I	TGCGCA	1 cut(s)	1659
Acc36I	ACCTGC	2 cut(s)	557, 1538
AccBSI	CCGCTC	2 cut(s)	616, 651
AccI	GTMKAC	1 cut(s)	938
AccII	CGCG	4 cut(s)	116, 728, 739, 784
AclWI	GGATC	7 cut(s)	237, 263, 276, 868, 1035, 1426, 1950
AcoI	YGGCCR	3 cut(s)	153, 621, 1620
AcsI	RAATTY	1 cut(s)	1518
AcyI	GRCGYC	6 cut(s)	30, 132, 342, 734, 793, 1108
AfaI	GTAC	4 cut(s)	1312, 1378, 1699, 1705
AfiI	CCNNNNNNNGG	5 cut(s)	619, 644, 1166, 1439, 1547
AgeI	ACCGGT	1 cut(s)	504
AgsI	TTSAA	6 cut(s)	367, 511, 1120, 1524, 1672, 1678
AhdI	GACNNNNNGTC	2 cut(s)	145, 1112
AhlI	ACTAGT	1 cut(s)	53
AjiI	CACGTC	1 cut(s)	90
AjnI	CCWGG	3 cut(s)	264, 921, 1148
AjuI	GAANNNNNNNTTGG	2 cut(s)	1185, 1217
AluBI	AGCT	9 cut(s)	100, 316, 684, 777, 1269, 1349, 1452, 1736, 1859
AluI	AGCT	9 cut(s)	100, 316, 684, 777, 1269, 1349, 1452, 1736, 1859
Alw21I	GWGCWC	2 cut(s)	102, 570
Alw26I	GTCTC	6 cut(s)	15, 21, 349, 600, 965, 1856
AlwI	GGATC	7 cut(s)	237, 263, 276, 868, 1035, 1426, 1950
AlwNI	CAGNNNCTG	1 cut(s)	1874
AoxI	GGCC	8 cut(s)	153, 577, 621, 646, 1151, 1169, 1620, 1943
ApoI	RAATTY	1 cut(s)	1518
AsiGI	ACCGGT	1 cut(s)	504
AspS9I	GGNCC	9 cut(s)	325, 502, 577, 610, 949, 964, 1152, 1169, 1944
AsuC2I	CCSGG	2 cut(s)	620, 1025
AsuHPI	GGTGA	8 cut(s)	130, 382, 541, 1088, 1138, 1316, 1796, 1881
AsuNHI	GCTAGC	1 cut(s)	106
AvaII	GGWCC	5 cut(s)	325, 502, 610, 949, 964
BalI	TGGCCA	1 cut(s)	155
BamHI	GGATCC	1 cut(s)	268
BanII	GRGCYC	1 cut(s)	102
BauI	CACGAG	4 cut(s)	101, 515, 563, 569
BbsI	GAAGAC	4 cut(s)	480, 819, 1388, 1846
Bbv12I	GWGCWC	2 cut(s)	102, 570
BccI	CCATC	2 cut(s)	339, 1828
BceAI	ACGGC	6 cut(s)	145, 550, 835, 926, 1037, 1156
BcgI	CGANNNNNNTGC	2 cut(s)	1472, 1506
BciT130I	CCWGG	3 cut(s)	266, 923, 1150
BclI	TGATCA	1 cut(s)	1321
BcnI	CCSGG	2 cut(s)	620, 1025
BcoDI	GTCTC	6 cut(s)	15, 21, 349, 600, 965, 1856
BcuI	ACTAGT	1 cut(s)	53
BfaI	CTAG	6 cut(s)	54, 107, 968, 1308, 1695, 1707
BfmI	CTRYAG	1 cut(s)	866
BfoI	RGCGCY	4 cut(s)	241, 709, 1343, 1500
BfuAI	ACCTGC	2 cut(s)	557, 1538
BglI	GCCNNNNNGGC	1 cut(s)	629
BglII	AGATCT	1 cut(s)	415
BlpI	GCTNAGC	1 cut(s)	312
BmcAI	AGTACT	2 cut(s)	1312, 1705
Bme1390I	CCNGG	5 cut(s)	266, 620, 923, 1025, 1150
Bme18I	GGWCC	5 cut(s)	325, 502, 610, 949, 964
BmeRI	GACNNNNNGTC	2 cut(s)	145, 1112
BmgBI	CACGTC	1 cut(s)	90
BmgT120I	GGNCC	9 cut(s)	325, 502, 577, 610, 949, 964, 1152, 1169, 1944
BmiI	GGNNCC	6 cut(s)	270, 284, 538, 612, 989, 1444
BmrFI	CCNGG	5 cut(s)	266, 620, 923, 1025, 1150
BmrI	ACTGGG	1 cut(s)	151
BmsI	GCATC	2 cut(s)	892, 1592
BmtI	GCTAGC	1 cut(s)	110
BmuI	ACTGGG	1 cut(s)	151
BpiI	GAAGAC	4 cut(s)	480, 819, 1388, 1846
BpmI	CTGGAG	2 cut(s)	218, 440
Bpu1102I	GCTNAGC	1 cut(s)	312
BpuEI	CTTGAG	1 cut(s)	1438
BpuMI	CCSGG	2 cut(s)	620, 1025
BsaHI	GRCGYC	6 cut(s)	30, 132, 342, 734, 793, 1108
BsaJI	CCNNGG	4 cut(s)	156, 166, 278, 435
BsaWI	WCCGGW	4 cut(s)	490, 499, 504, 607
BsaXI	ACNNNNNCTCC	2 cut(s)	57, 87
Bsc4I	CCNNNNNNNGG	5 cut(s)	619, 644, 1166, 1439, 1547
Bse118I	RCCGGY	3 cut(s)	504, 623, 708
Bse1I	ACTGG	4 cut(s)	146, 523, 1444, 1693
Bse3DI	GCAATG	2 cut(s)	1181, 1293
BseBI	CCWGG	3 cut(s)	266, 923, 1150
BseDI	CCNNGG	4 cut(s)	156, 166, 278, 435
BseGI	GGATG	2 cut(s)	42, 1820
BseLI	CCNNNNNNNGG	5 cut(s)	619, 644, 1166, 1439, 1547
BseMI	GCAATG	2 cut(s)	1181, 1293
BseMII	CTCAG	2 cut(s)	326, 1851
BseNI	ACTGG	4 cut(s)	146, 523, 1444, 1693
BseRI	GAGGAG	3 cut(s)	110, 587, 1028
BseX3I	CGGCCG	2 cut(s)	621, 1620
BseYI	CCCAGC	1 cut(s)	1327
BsgI	GTGCAG	1 cut(s)	1734
Bsh1236I	CGCG	4 cut(s)	116, 728, 739, 784
Bsh1285I	CGRYCG	2 cut(s)	624, 1623
BshFI	GGCC	8 cut(s)	155, 579, 623, 648, 1153, 1171, 1622, 1945
BshTI	ACCGGT	1 cut(s)	504
BsiEI	CGRYCG	2 cut(s)	624, 1623
BsiHKAI	GWGCWC	2 cut(s)	102, 570
BsiSI	CCGG	9 cut(s)	491, 500, 505, 608, 620, 624, 709, 952, 1024
BslFI	GGGAC	4 cut(s)	100, 443, 453, 1699
BslI	CCNNNNNNNGG	5 cut(s)	619, 644, 1166, 1439, 1547
BsmAI	GTCTC	6 cut(s)	15, 21, 349, 600, 965, 1856
BsmBI	CGTCTC	4 cut(s)	15, 21, 349, 965
BsmFI	GGGAC	4 cut(s)	100, 443, 453, 1699
BsnI	GGCC	8 cut(s)	155, 579, 623, 648, 1153, 1171, 1622, 1945
Bsp1286I	GDGCHC	2 cut(s)	102, 570
Bsp1720I	GCTNAGC	1 cut(s)	312
Bsp19I	CCATGG	1 cut(s)	156
BspANI	GGCC	8 cut(s)	155, 579, 623, 648, 1153, 1171, 1622, 1945
BspCNI	CTCAG	2 cut(s)	325, 1852
BspFNI	CGCG	4 cut(s)	116, 728, 739, 784
BspLI	GGNNCC	6 cut(s)	270, 284, 538, 612, 989, 1444
BspMAI	CTGCAG	1 cut(s)	870
BspMI	ACCTGC	2 cut(s)	557, 1538
BspOI	GCTAGC	1 cut(s)	110
BspPI	GGATC	7 cut(s)	237, 263, 276, 868, 1035, 1426, 1950
BsrBI	CCGCTC	2 cut(s)	616, 651
BsrDI	GCAATG	2 cut(s)	1181, 1293
BsrFI	RCCGGY	3 cut(s)	504, 623, 708
BsrI	ACTGG	4 cut(s)	146, 523, 1444, 1693
BssAI	RCCGGY	3 cut(s)	504, 623, 708
BssECI	CCNNGG	4 cut(s)	156, 166, 278, 435
BssNAI	GTATAC	1 cut(s)	939
BssNI	GRCGYC	6 cut(s)	30, 132, 342, 734, 793, 1108
BssSI	CACGAG	4 cut(s)	101, 515, 563, 569
BssT1I	CCWWGG	4 cut(s)	156, 166, 278, 435
Bst1107I	GTATAC	1 cut(s)	939
Bst2BI	CACGAG	4 cut(s)	101, 515, 563, 569
Bst2UI	CCWGG	3 cut(s)	266, 923, 1150
Bst4CI	ACNGT	4 cut(s)	694, 1376, 1682, 1845
Bst6I	CTCTTC	5 cut(s)	63, 384, 1127, 1550, 1721
BstACI	GRCGYC	6 cut(s)	30, 132, 342, 734, 793, 1108
BstAPI	GCANNNNNTGC	1 cut(s)	1874
BstC8I	GCNNGC	9 cut(s)	108, 112, 215, 710, 775, 1221, 1344, 1495, 1575
BstDEI	CTNAG	3 cut(s)	312, 1860, 1938
BstDSI	CCRYGG	1 cut(s)	156
BstF5I	GGATG	2 cut(s)	42, 1820
BstFNI	CGCG	4 cut(s)	116, 728, 739, 784
BstH2I	RGCGCY	4 cut(s)	241, 709, 1343, 1500
BstMAI	GTCTC	6 cut(s)	15, 21, 349, 600, 965, 1856
BstMCI	CGRYCG	2 cut(s)	624, 1623
BstNI	CCWGG	3 cut(s)	266, 923, 1150
BstNSI	RCATGY	2 cut(s)	114, 962
BstSCI	CCNGG	5 cut(s)	264, 618, 921, 1023, 1148
BstSFI	CTRYAG	1 cut(s)	866
BstUI	CGCG	4 cut(s)	116, 728, 739, 784
BstV2I	GAAGAC	4 cut(s)	480, 819, 1388, 1846
BstX2I	RGATCY	4 cut(s)	229, 268, 415, 1027
BstYI	RGATCY	4 cut(s)	229, 268, 415, 1027
BstZ17I	GTATAC	1 cut(s)	939
BstZI	CGGCCG	2 cut(s)	621, 1620
BsuRI	GGCC	8 cut(s)	155, 579, 623, 648, 1153, 1171, 1622, 1945
BtgI	CCRYGG	1 cut(s)	156
BtgZI	GCGATG	1 cut(s)	317
BtrI	CACGTC	1 cut(s)	90
BtsCI	GGATG	2 cut(s)	42, 1820
BveI	ACCTGC	2 cut(s)	557, 1538
Cac8I	GCNNGC	9 cut(s)	108, 112, 215, 710, 775, 1221, 1344, 1495, 1575
CaiI	CAGNNNCTG	1 cut(s)	1874
Cfr10I	RCCGGY	3 cut(s)	504, 623, 708
Cfr13I	GGNCC	9 cut(s)	325, 502, 577, 610, 949, 964, 1152, 1169, 1944
CpoI	CGGWCCG	1 cut(s)	502
CseI	GACGC	6 cut(s)	113, 121, 450, 723, 790, 1116
Csp6I	GTAC	4 cut(s)	1311, 1377, 1698, 1704
CspAI	ACCGGT	1 cut(s)	504
CspI	CGGWCCG	1 cut(s)	502
CviAII	CATG	5 cut(s)	111, 157, 257, 890, 959
CviQI	GTAC	4 cut(s)	1311, 1377, 1698, 1704
DdeI	CTNAG	3 cut(s)	312, 1860, 1938
DrdI	GACNNNNNNGTC	1 cut(s)	29
DriI	GACNNNNNGTC	2 cut(s)	145, 1112
DseDI	GACNNNNNNGTC	1 cut(s)	29
EaeI	YGGCCR	3 cut(s)	153, 621, 1620
EagI	CGGCCG	2 cut(s)	621, 1620
Eam1104I	CTCTTC	5 cut(s)	63, 384, 1127, 1550, 1721
Eam1105I	GACNNNNNGTC	2 cut(s)	145, 1112
EarI	CTCTTC	5 cut(s)	63, 384, 1127, 1550, 1721
Ecl136II	GAGCTC	1 cut(s)	100
EclXI	CGGCCG	2 cut(s)	621, 1620
Eco130I	CCWWGG	4 cut(s)	156, 166, 278, 435
Eco24I	GRGCYC	1 cut(s)	102
Eco32I	GATATC	1 cut(s)	11
Eco47I	GGWCC	5 cut(s)	325, 502, 610, 949, 964
Eco52I	CGGCCG	2 cut(s)	621, 1620
Eco53kI	GAGCTC	1 cut(s)	100
EcoICRI	GAGCTC	1 cut(s)	100
EcoO109I	RGGNCCY	1 cut(s)	325
EcoRII	CCWGG	3 cut(s)	264, 921, 1148
EcoRV	GATATC	1 cut(s)	11
EcoT14I	CCWWGG	4 cut(s)	156, 166, 278, 435
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	4 cut(s)	156, 166, 278, 435
Esp3I	CGTCTC	4 cut(s)	15, 21, 349, 965
FaeI	CATG	5 cut(s)	114, 160, 260, 893, 962
FaiI	YATR	9 cut(s)	112, 158, 258, 588, 891, 939, 947, 960, 1835
FaqI	GGGAC	4 cut(s)	100, 443, 453, 1699
FatI	CATG	5 cut(s)	110, 156, 256, 889, 958
FauI	CCCGC	3 cut(s)	192, 455, 621
FbaI	TGATCA	1 cut(s)	1321
FblI	GTMKAC	1 cut(s)	938
FokI	GGATG	2 cut(s)	49, 1807
FriOI	GRGCYC	1 cut(s)	102
FspBI	CTAG	6 cut(s)	54, 107, 968, 1308, 1695, 1707
FspI	TGCGCA	1 cut(s)	1659
GsaI	CCCAGC	1 cut(s)	1331
GsuI	CTGGAG	2 cut(s)	218, 440
HaeII	RGCGCY	4 cut(s)	241, 709, 1343, 1500
HaeIII	GGCC	8 cut(s)	155, 579, 623, 648, 1153, 1171, 1622, 1945
HapII	CCGG	9 cut(s)	491, 500, 505, 608, 620, 624, 709, 952, 1024
HgaI	GACGC	6 cut(s)	113, 121, 450, 723, 790, 1116
Hin1I	GRCGYC	6 cut(s)	30, 132, 342, 734, 793, 1108
Hin1II	CATG	5 cut(s)	114, 160, 260, 893, 962
HincII	GTYRAC	1 cut(s)	1236
HindII	GTYRAC	1 cut(s)	1236
HpaII	CCGG	9 cut(s)	491, 500, 505, 608, 620, 624, 709, 952, 1024
HphI	GGTGA	8 cut(s)	130, 382, 541, 1088, 1138, 1316, 1796, 1881
Hpy166II	GTNNAC	4 cut(s)	532, 939, 964, 1236
Hpy188I	TCNGA	9 cut(s)	460, 600, 655, 661, 673, 878, 1106, 1177, 1588
Hpy8I	GTNNAC	4 cut(s)	532, 939, 964, 1236
HpyAV	CCTTC	7 cut(s)	361, 1043, 1170, 1296, 1452, 1755, 1956
HpyCH4III	ACNGT	4 cut(s)	694, 1376, 1682, 1845
HpyCH4IV	ACGT	4 cut(s)	30, 89, 342, 793
HpyCH4V	TGCA	4 cut(s)	213, 361, 868, 1715
HpyF3I	CTNAG	3 cut(s)	312, 1860, 1938
HpySE526I	ACGT	4 cut(s)	30, 89, 342, 793
Hsp92I	GRCGYC	6 cut(s)	30, 132, 342, 734, 793, 1108
Hsp92II	CATG	5 cut(s)	114, 160, 260, 893, 962
KroI	GCCGGC	1 cut(s)	708
KroNI	GCCGGC	1 cut(s)	710
Ksp22I	TGATCA	1 cut(s)	1321
LmnI	GCTCC	7 cut(s)	97, 288, 542, 557, 621, 993, 1733
LweI	GCATC	2 cut(s)	892, 1592
MaeI	CTAG	6 cut(s)	54, 107, 968, 1308, 1695, 1707
MaeII	ACGT	4 cut(s)	30, 89, 342, 793
MaeIII	GTNAC	3 cut(s)	125, 929, 1435
MbiI	CCGCTC	2 cut(s)	616, 651
MflI	RGATCY	4 cut(s)	229, 268, 415, 1027
MhlI	GDGCHC	2 cut(s)	102, 570
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	7 cut(s)	541, 800, 806, 1518, 1648, 1667, 1673
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	9 cut(s)	86, 155, 425, 650, 662, 752, 992, 1172, 1205
MmeI	TCCRAC	5 cut(s)	623, 684, 1071, 1129, 1229
Mox20I	TGGCCA	1 cut(s)	155
MreI	CGCCGGCG	1 cut(s)	708
MroNI	GCCGGC	1 cut(s)	708
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	3 cut(s)	1359, 1394, 1755
MslI	CAYNNNNRTG	1 cut(s)	888
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	4 cut(s)	1610, 1616, 1859, 1871
MspI	CCGG	9 cut(s)	491, 500, 505, 608, 620, 624, 709, 952, 1024
MspR9I	CCNGG	5 cut(s)	266, 620, 923, 1025, 1150
MvaI	CCWGG	3 cut(s)	266, 923, 1150
MvnI	CGCG	4 cut(s)	116, 728, 739, 784
NaeI	GCCGGC	1 cut(s)	710
NciI	CCSGG	2 cut(s)	620, 1025
NcoI	CCATGG	1 cut(s)	156
NgoMIV	GCCGGC	1 cut(s)	708
NheI	GCTAGC	1 cut(s)	106
NlaIII	CATG	5 cut(s)	114, 160, 260, 893, 962
NlaIV	GGNNCC	6 cut(s)	270, 284, 538, 612, 989, 1444
NmuCI	GTSAC	2 cut(s)	125, 929
NsbI	TGCGCA	1 cut(s)	1659
NspI	RCATGY	2 cut(s)	114, 962
PaeI	GCATGC	1 cut(s)	114
PaqCI	CACCTGC	1 cut(s)	557
PcsI	WCGNNNNNNNCGW	1 cut(s)	86
PdiI	GCCGGC	1 cut(s)	710
PfeI	GAWTC	4 cut(s)	243, 1082, 1201, 1931
PinAI	ACCGGT	1 cut(s)	504
PleI	GAGTC	9 cut(s)	85, 154, 425, 650, 662, 751, 992, 1172, 1205
PpsI	GAGTC	9 cut(s)	85, 154, 425, 650, 662, 751, 992, 1172, 1205
PpuMI	RGGWCCY	1 cut(s)	325
Psp124BI	GAGCTC	1 cut(s)	102
Psp5II	RGGWCCY	1 cut(s)	325
Psp6I	CCWGG	3 cut(s)	264, 921, 1148
PspFI	CCCAGC	1 cut(s)	1327
PspGI	CCWGG	3 cut(s)	264, 921, 1148
PspN4I	GGNNCC	6 cut(s)	270, 284, 538, 612, 989, 1444
PspPI	GGNCC	9 cut(s)	325, 502, 577, 610, 949, 964, 1152, 1169, 1944
PspPPI	RGGWCCY	1 cut(s)	325
PstI	CTGCAG	1 cut(s)	870
PstNI	CAGNNNCTG	1 cut(s)	1874
PsuI	RGATCY	4 cut(s)	229, 268, 415, 1027
PvuII	CAGCTG	1 cut(s)	1859
RsaI	GTAC	4 cut(s)	1312, 1378, 1699, 1705
RsaNI	GTAC	4 cut(s)	1311, 1377, 1698, 1704
RseI	CAYNNNNRTG	1 cut(s)	888
Rsr2I	CGGWCCG	1 cut(s)	502
RsrII	CGGWCCG	1 cut(s)	502
SacI	GAGCTC	1 cut(s)	102
SaqAI	TTAA	3 cut(s)	1359, 1394, 1755
Sau96I	GGNCC	9 cut(s)	325, 502, 577, 610, 949, 964, 1152, 1169, 1944
ScaI	AGTACT	2 cut(s)	1312, 1705
SchI	GAGTC	9 cut(s)	86, 155, 425, 650, 662, 752, 992, 1172, 1205
ScrFI	CCNGG	5 cut(s)	266, 620, 923, 1025, 1150
SduI	GDGCHC	2 cut(s)	102, 570
SfaNI	GCATC	2 cut(s)	892, 1592
SfcI	CTRYAG	1 cut(s)	866
SgrAI	CRCCGGYG	1 cut(s)	708
SinI	GGWCC	5 cut(s)	325, 502, 610, 949, 964
SmiMI	CAYNNNNRTG	1 cut(s)	888
SmlI	CTYRAG	1 cut(s)	1453
SmoI	CTYRAG	1 cut(s)	1453
SpeI	ACTAGT	1 cut(s)	53
SphI	GCATGC	1 cut(s)	114
Sse9I	AATT	7 cut(s)	541, 800, 806, 1518, 1648, 1667, 1673
SspMI	CTAG	6 cut(s)	54, 107, 968, 1308, 1695, 1707
SstI	GAGCTC	1 cut(s)	102
StyD4I	CCNGG	5 cut(s)	264, 618, 921, 1023, 1148
StyI	CCWWGG	4 cut(s)	156, 166, 278, 435
TaaI	ACNGT	4 cut(s)	694, 1376, 1682, 1845
TaiI	ACGT	4 cut(s)	33, 92, 345, 796
TaqI	TCGA	1 cut(s)	1421
TasI	AATT	7 cut(s)	541, 800, 806, 1518, 1648, 1667, 1673
TatI	WGTACW	3 cut(s)	1310, 1697, 1703
TfiI	GAWTC	4 cut(s)	243, 1082, 1201, 1931
Tru1I	TTAA	3 cut(s)	1359, 1394, 1755
Tru9I	TTAA	3 cut(s)	1359, 1394, 1755
TseFI	GTSAC	2 cut(s)	125, 929
Tsp45I	GTSAC	2 cut(s)	125, 929
TspDTI	ATGAA	4 cut(s)	53, 1142, 1152, 1422
TspGWI	ACGGA	3 cut(s)	33, 39, 1075
VpaK11BI	GGWCC	5 cut(s)	325, 502, 610, 949, 964
XapI	RAATTY	1 cut(s)	1518
XceI	RCATGY	2 cut(s)	114, 962
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XmiI	GTMKAC	1 cut(s)	938
XspI	CTAG	6 cut(s)	54, 107, 968, 1308, 1695, 1707
ZraI	GACGTC	3 cut(s)	31, 343, 794
ZrmI	AGTACT	2 cut(s)	1312, 1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.