Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009387

Physical Location & Seq

Genomic Coordinates Reverse (-)

47872187 .. 47877400

Gene Structure 5214 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGCGACAGATATGCAGAGGTTAATTGGGACGAGTGAAGAAGATGATGAGGAAGAAATGGACATGGATGTGAAAGAAGAGGGAGATGGTGATGATGACGAAGATGTTGAGAAGCATGTTGATTCGACCCCGATGATGATCGGGGTTGATGGAGGGATGGCAACAAGTAGTTGTAATAATAACCGGTTTCAACAGCACCAGCAAATGCAAGAAGTGGGGACCCCTGGTGGGGGAGGAGCTAGGAGGTGTAGACCGTTAGAAGAGAAAGAGAGAACCAAGATAAGAGAGCGGCAGCGCAGGGCGATCACTGCAAAGATCTTAGCAGGGCTACGGAGGCATGGAAATTATAACCTCAGAGTCAGGGCTGATATCAATGATGTAATTGCGGCTTTGGCTAGGGAAGCTGGCTGGGTTGTTCTTCCGGATGGAACCACTTATCCTTCAAACTCTCAGGGCCCAAGGCCTGCTGGTGTCAGTTCTACAGCGGCCACTTCATCATCTTCCCAAATGATGTCCCAAACAACTCCGGTGTCCCTTAAAGGAGTTACCTCTAGCTATCAAAGCTCTGTGGAGCATAATGCAGGTCACATGAAAAGTGTTTTTATGCCTGCTTCATCACCTTATGATCTTCCATCAATCATCACGGGAGATGGAGGAGATCAAACACAGAGTCATCCTCTTATTGGTGGCTCCATGGATAATGTTGGGGACAAGCAGATTGTTGACGTGCCCCAGAAGTTACCAGAACGTGATTTTGCCAACACGGCTTACATTCCAGTTTATGTTATGCTGCCATTAGGTGTCATTAATATGAAGTGTGAACTGGTTGATCCAGATGGTCTATTAAAGCAGCTAAGGGTATTGAAATCAGTTAATGTTGATGGTGTTATGGTTGATTGCTGGTGGGGGATAGTAGAGGGACATGCTCCACTGGAGTATAACTGGAATGGATATAAGAGACTCTTTCAGATGGTGCGCGACCTAAAGCTGAAGTTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATGTGGGTGATGATGTATGTATCACACTACCCCATTGGGTGGCTGAAATTGGTAGAAGTAACCCTGACATATTTTTCACTGATAGAGCAGGAAGACGTAACCCTGAATGCCTATCATGGGGAATAGACAAGGAACGAGTTTTAAGAGGCCGGACTGCTGTTGAGGTATACTTTGACTGCATGAGAAGCTTCCGTGTAGAGTTTGACGAGTTCTTTCAAGATGGCATTATCTCCATGATTCAAGTTGGACTAGGTCCATGTGGCGAACTAAGATTCCCATCTTGTACTGTAAAGCATGGTTGGCGATATCCAGGCATTGGTGAATTTCAGTGTTACGATCAGTATTTGCTGAAAAGTCTGAGAAAGGCAGCAGAAGCAAGGGGACACTCCTTCTGGGGTAGAGGTCCAGATAATGCAGGTTCTTATAATTCGCGGCCACATGAATCCGGTTTCTTTTGCGATGGAGGAGATTATGATGGCTACTATGGCAGGTTCTTCCTTAATTGGTACTCCCGAATTTTAGTTGATCATGGTGATCGAGTGCTTTCTCTAGCAAAGCTAGCGTTTGACGGCACCTGCATTGCTGCAAAGCTATCAGGTATTCACTGGTGGTACAAGACACCTAGTCATGCTGCTGAGCTGACTGCTGGCTTCTATAATCCATGCAACCGAGATGGTTATGCTGCAATTATGATGATGCTAAAGAAGCATGGTGCTTCTTTAAACCTTGTATGCACTCAATTGCATATGTTAGACCAGAATATTGACTTCCAAGAGGCAATGGGAGATCCTGAGGGTTTATTTTGGCAAGTGCTGAATGCTGCATGGGATGTTTGCGTACCAGTTTCTAGTGAGAATGCACTTTTATGTGAGAATGCTCTTTTATGTCATAGTCGTGTCGGATACAACAAGATATTGGATAATTCCAAGCCCTTGACTGATCCAGATGGAAGGCATTTGTCATCTTTTACCTACCTTAGGCTCAGTCCGCTTCTAATGGAAAGACATAACTTCATGGAATTTGACCGATTTGTTAAGAGAATGCATGGGGAAGCTGTTCTTGATCTACATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016160 GO:0016161 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

BES1_N Glyco_hydro_14

Protein Analysis

701

Amino Acids

78.42

Weight (kDa)

5.58

Isoelectric Point (pI)

40.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BES1_N	PF05687	80 - 216	2.2e-40	BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14	PF01373	261 - 682	2.2e-117	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45880
fragaria_vesca	FvH4_7g14210 FvH4_7g14210 FvH4_7g14210
malus_domestica	MD01G1059300.v1.1 MD07G1138200.v1.1
prunus_persica	Prupe.2G169900_v2.0.a1 Prupe.2G169900_v2.0.a1
pyrus_communis	pycom07g13560
rosa_chinensis	RchiOBHm_Chr1g0355141
rosa_laevigata	RLG00000028174
rosa_multiflora	Rmu_sc0003115.1_g000036 Rmu_sc0004488.1_g000006
rosa_roxburghii	Rroxscaffold_4G00300640
rosa_rugosa	Rorug01G0245400 Rorug01G0245500 Rorug01G0245600
rosa_samantha	Rh1AG257700 Rh1BG227200 Rh1CG241300 Rh1DG254900
rosa_wichuraiana	Rw1G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	348, 1455
AarI	CACCTGC	1 cut(s)	1613
Acc36I	ACCTGC	5 cut(s)	572, 988, 1436, 1509, 1613
AccB1I	GGYRCC	1 cut(s)	1601
AccB7I	CCANNNNNTGG	2 cut(s)	1069, 1346
AccBSI	CCGCTC	1 cut(s)	289
AccI	GTMKAC	2 cut(s)	250, 1197
AccII	CGCG	2 cut(s)	978, 1462
AccIII	TCCGGA	1 cut(s)	421
AciI	CCGC	5 cut(s)	289, 386, 485, 1462, 2018
AclWI	GGATC	3 cut(s)	824, 1811, 1964
AcoI	YGGCCR	2 cut(s)	486, 1463
AcsI	RAATTY	3 cut(s)	1352, 1545, 2048
AcuI	CTGAAG	1 cut(s)	1010
AfaI	GTAC	4 cut(s)	1315, 1538, 1643, 1869
AfiI	CCNNNNNNNGG	8 cut(s)	228, 229, 230, 683, 1069, 1147, 1346, 2007
AflIII	ACRYGT	1 cut(s)	2098
AgeI	ACCGGT	1 cut(s)	183
AgsI	TTSAA	5 cut(s)	191, 444, 865, 1247, 1271
AhdI	GACNNNNNGTC	1 cut(s)	1653
AjiI	CACGTC	1 cut(s)	727
AjnI	CCWGG	2 cut(s)	223, 1339
AloI	GAACNNNNNNTCC	4 cut(s)	421, 453, 1287, 1319
Alw26I	GTCTC	1 cut(s)	952
AlwI	GGATC	3 cut(s)	824, 1811, 1964
Aor13HI	TCCGGA	1 cut(s)	421
AoxI	GGCC	5 cut(s)	454, 461, 486, 1177, 1463
ApaI	GGGCCC	1 cut(s)	458
ApeKI	GCWGC	8 cut(s)	292, 790, 850, 1397, 1613, 1661, 1712, 1850
ApoI	RAATTY	3 cut(s)	1352, 1545, 2048
ArsI	GACNNNNNNTTYG	2 cut(s)	655, 687
AseI	ATTAAT	1 cut(s)	807
AsiGI	ACCGGT	1 cut(s)	183
Asp700I	GAANNNNTTC	1 cut(s)	2085
AspLEI	GCGC	2 cut(s)	297, 978
AspS9I	GGNCC	5 cut(s)	219, 454, 455, 1283, 1433
AsuHPI	GGTGA	5 cut(s)	101, 609, 1049, 1361, 1574
AsuNHI	GCTAGC	1 cut(s)	1588
AvaII	GGWCC	3 cut(s)	219, 1283, 1433
AxyI	CCTNAGG	2 cut(s)	1821, 2006
BaeGI	GKGCMC	2 cut(s)	458, 732
BanI	GGYRCC	1 cut(s)	1601
BanII	GRGCYC	1 cut(s)	458
BbsI	GAAGAC	1 cut(s)	1129
BbvI	GCAGC	8 cut(s)	304, 777, 862, 1409, 1600, 1648, 1699, 1837
BceAI	ACGGC	2 cut(s)	780, 1615
BcgI	CGANNNNNNTGC	1 cut(s)	29
BciT130I	CCWGG	2 cut(s)	225, 1341
BciVI	GTATCC	1 cut(s)	1925
BclI	TGATCA	1 cut(s)	1555
BcoDI	GTCTC	1 cut(s)	952
BfaI	CTAG	8 cut(s)	240, 396, 552, 1280, 1580, 1589, 1653, 1878
BfmI	CTRYAG	1 cut(s)	480
BfuAI	ACCTGC	5 cut(s)	572, 988, 1436, 1509, 1613
BfuI	GTATCC	1 cut(s)	1925
BglI	GCCNNNNNGGC	1 cut(s)	764
BglII	AGATCT	1 cut(s)	315
BlpI	GCTNAGC	1 cut(s)	1665
Bme1390I	CCNGG	2 cut(s)	225, 1341
Bme18I	GGWCC	3 cut(s)	219, 1283, 1433
BmeRI	GACNNNNNGTC	1 cut(s)	1653
BmgBI	CACGTC	1 cut(s)	727
BmgT120I	GGNCC	5 cut(s)	219, 454, 455, 1283, 1433
BmiI	GGNNCC	6 cut(s)	220, 221, 430, 456, 691, 1603
BmrFI	CCNGG	2 cut(s)	225, 1341
BmsI	GCATC	1 cut(s)	1716
BmtI	GCTAGC	1 cut(s)	1592
BpiI	GAAGAC	1 cut(s)	1129
BplI	GAGNNNNNCTC	2 cut(s)	661, 693
BpmI	CTGGAG	1 cut(s)	953
Bpu10I	CCTNAGC	1 cut(s)	854
Bpu1102I	GCTNAGC	1 cut(s)	1665
BsaBI	GATNNNNATC	2 cut(s)	137, 1306
BsaJI	CCNNGG	3 cut(s)	223, 458, 693
BsaWI	WCCGGW	4 cut(s)	183, 421, 526, 1475
BsaXI	ACNNNNNCTCC	2 cut(s)	1017, 1047
Bsc4I	CCNNNNNNNGG	8 cut(s)	228, 229, 230, 683, 1069, 1147, 1346, 2007
Bse118I	RCCGGY	1 cut(s)	183
Bse1I	ACTGG	6 cut(s)	776, 828, 936, 947, 1640, 1871
Bse21I	CCTNAGG	2 cut(s)	1821, 2006
Bse3DI	GCAATG	3 cut(s)	1036, 1608, 1815
Bse8I	GATNNNNATC	2 cut(s)	137, 1306
BseAI	TCCGGA	1 cut(s)	421
BseBI	CCWGG	2 cut(s)	225, 1341
BseDI	CCNNGG	3 cut(s)	223, 458, 693
BseGI	GGATG	5 cut(s)	73, 162, 430, 673, 1864
BseJI	GATNNNNATC	2 cut(s)	137, 1306
BseLI	CCNNNNNNNGG	8 cut(s)	228, 229, 230, 683, 1069, 1147, 1346, 2007
BseMI	GCAATG	3 cut(s)	1036, 1608, 1815
BseMII	CTCAG	6 cut(s)	367, 464, 1379, 1656, 1812, 2026
BseNI	ACTGG	6 cut(s)	776, 828, 936, 947, 1640, 1871
BseRI	GAGGAG	3 cut(s)	249, 669, 1509
BseSI	GKGCMC	2 cut(s)	458, 732
BseXI	GCAGC	8 cut(s)	304, 777, 862, 1409, 1600, 1648, 1699, 1837
BseYI	CCCAGC	1 cut(s)	408
Bsh1236I	CGCG	2 cut(s)	978, 1462
BshFI	GGCC	5 cut(s)	456, 463, 488, 1179, 1465
BshNI	GGYRCC	1 cut(s)	1601
BshTI	ACCGGT	1 cut(s)	183
BsiSI	CCGG	5 cut(s)	184, 422, 527, 1180, 1476
BslFI	GGGAC	7 cut(s)	43, 232, 499, 517, 722, 933, 1425
BslI	CCNNNNNNNGG	8 cut(s)	228, 229, 230, 683, 1069, 1147, 1346, 2007
BsmAI	GTCTC	1 cut(s)	952
BsmFI	GGGAC	7 cut(s)	43, 232, 499, 517, 722, 933, 1425
BsmI	GAATGC	5 cut(s)	1142, 1852, 1891, 1909, 2076
BsnI	GGCC	5 cut(s)	456, 463, 488, 1179, 1465
Bsp120I	GGGCCC	1 cut(s)	454
Bsp1286I	GDGCHC	2 cut(s)	458, 732
Bsp13I	TCCGGA	1 cut(s)	421
Bsp1720I	GCTNAGC	1 cut(s)	1665
Bsp19I	CCATGG	1 cut(s)	693
BspACI	CCGC	5 cut(s)	289, 386, 485, 1462, 2018
BspANI	GGCC	5 cut(s)	456, 463, 488, 1179, 1465
BspCNI	CTCAG	6 cut(s)	366, 463, 1380, 1657, 1813, 2025
BspEI	TCCGGA	1 cut(s)	421
BspFNI	CGCG	2 cut(s)	978, 1462
BspHI	TCATGA	1 cut(s)	1015
BspLI	GGNNCC	6 cut(s)	220, 221, 430, 456, 691, 1603
BspMI	ACCTGC	5 cut(s)	572, 988, 1436, 1509, 1613
BspOI	GCTAGC	1 cut(s)	1592
BspPI	GGATC	3 cut(s)	824, 1811, 1964
BspT107I	GGYRCC	1 cut(s)	1601
BsrBI	CCGCTC	1 cut(s)	289
BsrDI	GCAATG	3 cut(s)	1036, 1608, 1815
BsrFI	RCCGGY	1 cut(s)	183
BsrI	ACTGG	6 cut(s)	776, 828, 936, 947, 1640, 1871
BssAI	RCCGGY	1 cut(s)	183
BssECI	CCNNGG	3 cut(s)	223, 458, 693
BssNAI	GTATAC	1 cut(s)	1198
BssT1I	CCWWGG	2 cut(s)	458, 693
Bst1107I	GTATAC	1 cut(s)	1198
Bst2UI	CCWGG	2 cut(s)	225, 1341
Bst4CI	ACNGT	2 cut(s)	255, 1318
Bst6I	CTCTTC	2 cut(s)	72, 255
BstC8I	GCNNGC	5 cut(s)	406, 465, 609, 1590, 1678
BstDSI	CCRYGG	1 cut(s)	693
BstENI	CCTNNNNNAGG	1 cut(s)	2005
BstF5I	GGATG	5 cut(s)	73, 162, 430, 673, 1864
BstFNI	CGCG	2 cut(s)	978, 1462
BstHHI	GCGC	2 cut(s)	297, 978
BstMAI	GTCTC	1 cut(s)	952
BstNI	CCWGG	2 cut(s)	225, 1341
BstNSI	RCATGY	3 cut(s)	119, 926, 2102
BstSCI	CCNGG	2 cut(s)	223, 1339
BstSFI	CTRYAG	1 cut(s)	480
BstSLI	GKGCMC	2 cut(s)	458, 732
BstUI	CGCG	2 cut(s)	978, 1462
BstV1I	GCAGC	8 cut(s)	304, 777, 862, 1409, 1600, 1648, 1699, 1837
BstV2I	GAAGAC	1 cut(s)	1129
BstX2I	RGATCY	2 cut(s)	315, 1816
BstYI	RGATCY	2 cut(s)	315, 1816
BstZ17I	GTATAC	1 cut(s)	1198
Bsu36I	CCTNAGG	2 cut(s)	1821, 2006
BsuI	GTATCC	1 cut(s)	1925
BsuRI	GGCC	5 cut(s)	456, 463, 488, 1179, 1465
BtgI	CCRYGG	1 cut(s)	693
BtgZI	GCGATG	1 cut(s)	1503
BtrI	CACGTC	1 cut(s)	727
BtsCI	GGATG	5 cut(s)	73, 162, 430, 673, 1864
BtsI	GCAGTG	1 cut(s)	306
BtsIMutI	CAGTG	5 cut(s)	306, 929, 1107, 1364, 1633
BveI	ACCTGC	5 cut(s)	572, 988, 1436, 1509, 1613
Cac8I	GCNNGC	5 cut(s)	406, 465, 609, 1590, 1678
CciI	TCATGA	1 cut(s)	1015
CfoI	GCGC	2 cut(s)	297, 978
Cfr10I	RCCGGY	1 cut(s)	183
Cfr13I	GGNCC	5 cut(s)	219, 454, 455, 1283, 1433
Csp6I	GTAC	4 cut(s)	1314, 1537, 1642, 1868
CspAI	ACCGGT	1 cut(s)	183
CviQI	GTAC	4 cut(s)	1314, 1537, 1642, 1868
DraI	TTTAAA	1 cut(s)	1752
DriI	GACNNNNNGTC	1 cut(s)	1653
EaeI	YGGCCR	2 cut(s)	486, 1463
Eam1104I	CTCTTC	2 cut(s)	72, 255
Eam1105I	GACNNNNNGTC	1 cut(s)	1653
EarI	CTCTTC	2 cut(s)	72, 255
Eco130I	CCWWGG	2 cut(s)	458, 693
Eco147I	AGGCCT	1 cut(s)	463
Eco24I	GRGCYC	1 cut(s)	458
Eco32I	GATATC	2 cut(s)	370, 1337
Eco47I	GGWCC	3 cut(s)	219, 1283, 1433
Eco57I	CTGAAG	1 cut(s)	1010
Eco81I	CCTNAGG	2 cut(s)	1821, 2006
EcoNI	CCTNNNNNAGG	1 cut(s)	2005
EcoO109I	RGGNCCY	2 cut(s)	219, 454
EcoRII	CCWGG	2 cut(s)	223, 1339
EcoRV	GATATC	2 cut(s)	370, 1337
EcoT14I	CCWWGG	2 cut(s)	458, 693
EcoT22I	ATGCAT	1 cut(s)	2076
EcoT38I	GRGCYC	1 cut(s)	458
ErhI	CCWWGG	2 cut(s)	458, 693
FalI	AAGNNNNNCTT	4 cut(s)	947, 979, 2073, 2105
FaqI	GGGAC	7 cut(s)	43, 232, 499, 517, 722, 933, 1425
FauNDI	CATATG	1 cut(s)	1776
FbaI	TGATCA	1 cut(s)	1555
FblI	GTMKAC	2 cut(s)	250, 1197
FokI	GGATG	5 cut(s)	80, 169, 437, 660, 1871
FriOI	GRGCYC	1 cut(s)	458
FspBI	CTAG	8 cut(s)	240, 396, 552, 1280, 1580, 1589, 1653, 1878
GlaI	GCGC	2 cut(s)	296, 977
GsaI	CCCAGC	1 cut(s)	412
GsuI	CTGGAG	1 cut(s)	953
HaeIII	GGCC	5 cut(s)	456, 463, 488, 1179, 1465
HapII	CCGG	5 cut(s)	184, 422, 527, 1180, 1476
HhaI	GCGC	2 cut(s)	297, 978
Hin6I	GCGC	2 cut(s)	295, 976
HinP1I	GCGC	2 cut(s)	295, 976
HincII	GTYRAC	1 cut(s)	724
HindII	GTYRAC	1 cut(s)	724
HindIII	AAGCTT	1 cut(s)	1216
HinfI	GANTC	7 cut(s)	122, 357, 670, 960, 1267, 1302, 1472
HpaII	CCGG	5 cut(s)	184, 422, 527, 1180, 1476
HphI	GGTGA	5 cut(s)	101, 609, 1049, 1361, 1574
Hpy166II	GTNNAC	4 cut(s)	251, 724, 821, 1198
Hpy188I	TCNGA	4 cut(s)	356, 969, 1389, 1931
Hpy188III	TCNNGA	9 cut(s)	422, 833, 1016, 1247, 1436, 1542, 1820, 1973, 2090
Hpy8I	GTNNAC	4 cut(s)	251, 724, 821, 1198
HpyAV	CCTTC	3 cut(s)	450, 1429, 1974
HpyCH4III	ACNGT	2 cut(s)	255, 1318
HpyCH4IV	ACGT	3 cut(s)	726, 748, 1126
HpySE526I	ACGT	3 cut(s)	726, 748, 1126
HspAI	GCGC	2 cut(s)	295, 976
KflI	GGGWCCC	1 cut(s)	219
Kpn2I	TCCGGA	1 cut(s)	421
Ksp22I	TGATCA	1 cut(s)	1555
LmnI	GCTCC	4 cut(s)	236, 571, 695, 931
Lsp1109I	GCAGC	8 cut(s)	304, 777, 862, 1409, 1600, 1648, 1699, 1837
LweI	GCATC	1 cut(s)	1716
MaeI	CTAG	8 cut(s)	240, 396, 552, 1280, 1580, 1589, 1653, 1878
MaeII	ACGT	3 cut(s)	726, 748, 1126
MaeIII	GTNAC	6 cut(s)	544, 584, 738, 1088, 1127, 1361
MbiI	CCGCTC	1 cut(s)	289
MfeI	CAATTG	1 cut(s)	1769
MflI	RGATCY	2 cut(s)	315, 1816
MhlI	GDGCHC	2 cut(s)	458, 732
MlyI	GAGTC	3 cut(s)	366, 679, 954
MmeI	TCCRAC	2 cut(s)	1255, 1909
Mph1103I	ATGCAT	1 cut(s)	2076
MroI	TCCGGA	1 cut(s)	421
MroXI	GAANNNNTTC	1 cut(s)	2085
MseI	TTAA	9 cut(s)	23, 537, 807, 845, 873, 1172, 1530, 1751, 2064
MslI	CAYNNNNRTG	5 cut(s)	68, 809, 1020, 1894, 1923
MspA1I	CMGCKG	1 cut(s)	485
MspI	CCGG	5 cut(s)	184, 422, 527, 1180, 1476
MspR9I	CCNGG	2 cut(s)	225, 1341
MunI	CAATTG	1 cut(s)	1769
Mva1269I	GAATGC	5 cut(s)	1142, 1852, 1891, 1909, 2076
MvaI	CCWGG	2 cut(s)	225, 1341
MvnI	CGCG	2 cut(s)	978, 1462
NcoI	CCATGG	1 cut(s)	693
NdeI	CATATG	1 cut(s)	1776
NheI	GCTAGC	1 cut(s)	1588
NlaIV	GGNNCC	6 cut(s)	220, 221, 430, 456, 691, 1603
NmuCI	GTSAC	1 cut(s)	584
NsiI	ATGCAT	1 cut(s)	2076
NspI	RCATGY	3 cut(s)	119, 926, 2102
PagI	TCATGA	1 cut(s)	1015
PaqCI	CACCTGC	1 cut(s)	1613
PceI	AGGCCT	1 cut(s)	463
PciI	ACATGT	1 cut(s)	2098
PctI	GAATGC	5 cut(s)	1142, 1852, 1891, 1909, 2076
PdmI	GAANNNNTTC	1 cut(s)	2085
PfeI	GAWTC	4 cut(s)	122, 1267, 1302, 1472
PflFI	GACNNNGTC	1 cut(s)	1281
PflMI	CCANNNNNTGG	2 cut(s)	1069, 1346
PinAI	ACCGGT	1 cut(s)	183
PleI	GAGTC	3 cut(s)	365, 678, 954
PpsI	GAGTC	3 cut(s)	365, 678, 954
PpuMI	RGGWCCY	1 cut(s)	219
PscI	ACATGT	1 cut(s)	2098
PshBI	ATTAAT	1 cut(s)	807
PsiI	TTATAA	2 cut(s)	348, 1455
Psp5II	RGGWCCY	1 cut(s)	219
Psp6I	CCWGG	2 cut(s)	223, 1339
PspFI	CCCAGC	1 cut(s)	408
PspGI	CCWGG	2 cut(s)	223, 1339
PspN4I	GGNNCC	6 cut(s)	220, 221, 430, 456, 691, 1603
PspOMI	GGGCCC	1 cut(s)	454
PspPI	GGNCC	5 cut(s)	219, 454, 455, 1283, 1433
PspPPI	RGGWCCY	1 cut(s)	219
PsuI	RGATCY	2 cut(s)	315, 1816
PsyI	GACNNNGTC	1 cut(s)	1281
RsaI	GTAC	4 cut(s)	1315, 1538, 1643, 1869
RsaNI	GTAC	4 cut(s)	1314, 1537, 1642, 1868
RseI	CAYNNNNRTG	5 cut(s)	68, 809, 1020, 1894, 1923
SaqAI	TTAA	9 cut(s)	23, 537, 807, 845, 873, 1172, 1530, 1751, 2064
Sau96I	GGNCC	5 cut(s)	219, 454, 455, 1283, 1433
SchI	GAGTC	3 cut(s)	366, 679, 954
ScrFI	CCNGG	2 cut(s)	225, 1341
SduI	GDGCHC	2 cut(s)	458, 732
SfaNI	GCATC	1 cut(s)	1716
SfcI	CTRYAG	1 cut(s)	480
SinI	GGWCC	3 cut(s)	219, 1283, 1433
SmiMI	CAYNNNNRTG	5 cut(s)	68, 809, 1020, 1894, 1923
SseBI	AGGCCT	1 cut(s)	463
SsiI	CCGC	5 cut(s)	289, 386, 485, 1462, 2018
SspI	AATATT	1 cut(s)	1792
SspMI	CTAG	8 cut(s)	240, 396, 552, 1280, 1580, 1589, 1653, 1878
StuI	AGGCCT	1 cut(s)	463
StyD4I	CCNGG	2 cut(s)	223, 1339
StyI	CCWWGG	2 cut(s)	458, 693
TaaI	ACNGT	2 cut(s)	255, 1318
TaiI	ACGT	3 cut(s)	729, 751, 1129
TaqI	TCGA	2 cut(s)	125, 1567
TaqII	GACCGA	1 cut(s)	2070
TatI	WGTACW	1 cut(s)	1313
TauI	GCSGC	4 cut(s)	292, 389, 488, 1465
TfiI	GAWTC	4 cut(s)	122, 1267, 1302, 1472
Tru1I	TTAA	9 cut(s)	23, 537, 807, 845, 873, 1172, 1530, 1751, 2064
Tru9I	TTAA	9 cut(s)	23, 537, 807, 845, 873, 1172, 1530, 1751, 2064
TscAI	CASTG	5 cut(s)	313, 936, 1114, 1364, 1640
TseFI	GTSAC	1 cut(s)	584
TseI	GCWGC	8 cut(s)	292, 790, 850, 1397, 1613, 1661, 1712, 1850
Tsp45I	GTSAC	1 cut(s)	584
TspDTI	ATGAA	8 cut(s)	483, 603, 605, 827, 1004, 1032, 1485, 2032
TspGWI	ACGGA	2 cut(s)	346, 1211
TspRI	CASTG	5 cut(s)	313, 936, 1114, 1364, 1640
Tth111I	GACNNNGTC	1 cut(s)	1281
Van91I	CCANNNNNTGG	2 cut(s)	1069, 1346
VpaK11BI	GGWCC	3 cut(s)	219, 1283, 1433
VspI	ATTAAT	1 cut(s)	807
XagI	CCTNNNNNAGG	1 cut(s)	2005
XapI	RAATTY	3 cut(s)	1352, 1545, 2048
XceI	RCATGY	3 cut(s)	119, 926, 2102
XmiI	GTMKAC	2 cut(s)	250, 1197
XmnI	GAANNNNTTC	1 cut(s)	2085
XspI	CTAG	8 cut(s)	240, 396, 552, 1280, 1580, 1589, 1653, 1878
Zsp2I	ATGCAT	1 cut(s)	2076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.