Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008299

Physical Location & Seq

Genomic Coordinates Forward (+)

59905191 .. 59908179

Gene Structure 2989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGTGCAAGGGTTCTAAGAGTAGAGTTATCTCCTCAAATTTCATCATGGAAAATGAATTTCAGAATCAGAACGGTGGCAGCCTGTATAAGTCTTCGGTTTTGGTTGAGTTGTCTGCCTCGGACAATCTCGATGCTTTCAGGAGTGAAGTAGAAGAGAAAGGTTTCCATGTTGATGAGGCCAGCTTTTGGTATGGAAGAGGAATTGGGTCAAAGAAGATGGGGTTCGAAGAGAGGACACCGCTTATGATCGCTGCCATGTTTGGTAGCACCAAGGTTTTGAAGTATATAATTGACTCTGGCAAGGTTGATGTCAATAGGTCCTGTGGTTCTGATAGGGTTACTGCCCTTCACTGTGCCACTGCTGGCGGTTCCTCTTCTTCGCTTGAGGTTGTCAAGCTCTTGCTTGATGCATCTGCTGATGCTGATTGTGTCACCGCTAATGGAAACAAGCCTGTTGACTTGATTGCCCCCGCTTTGAAGTCTCCTTGCAACTCAAGAAGAAAGGCCATGGAGATGTTGTTGAAAGGCGATATGTCACTTTTGGGAAGTGATATTGATGATCAAGAGGTTCCAAGCCTTCAGTTGCTGAAAGAGGGAAGCGAGAAGAAAGAATATCCTATTGATATTGCATTGCCAGATATCAACAATGGGATTTATGGTTCAGATGAGTTCAGAATGTACACTTTCAAGGTGAAGCCGTGCTCCAGGGCCTACTCTCATGACTGGACCGAGTGCCCTTTTGTTCACCCCGGTGAGAATGCAAGGAGGAGAGACCCAAGGAAGTATCCATACAGCTGTGTCCCCTGCCCTGAGTTCCGCAAAGGCTCATGCCAGAAGGGAGATGTCTGTGAATATGCTCATGGTGTTTTCGAGTCCTGGCTTCATCCTGCTCAATACCGCACTCGCCTTTGCAAGGACGAAACTGGATGCACAAGGAAGGTGTGCTTCTTTGCTCACAAACCTGAAGAGTTGCGCCCAGTGTATGTTTCCACGGGTTCAGCCATGCCTTCACCTAGGTCTATGTCAGCCAGCGCTGGAGATATGACAACCATGAGCCCATTAGCTCTTGGTTCACCATCTCTGTCTATGCCTACCGCATCAACACCACCCATGTCTCCAATTGCAGCCTCTTCTCCTAAGAATGGAGGTCTGTGGCAGAACAAGGTTAACCTCACCCCACCTGCCTTGCAGCTTCCAGGTAGCAGGCTAAAGAGTGCCTCAAGCGCTCGTGATTTGGACTTGGAGATGGAATTTCTAGGGCGTGATAATCACGCTAACCAACAACAGCAGCAACAGCAACAGCATATGTGGGATGAGATGTCTCGTCTCTCCTCTCCATCCTGCTATAATAACAGCAGGATTGGAGAATTGAAGCCAACTAACCTTGACGACCTTTTTGGATCATTTGATCCTTCTTTTTTGTCCCAATTGCAGGCACTCTCAACACAAACCCAGTTACAATCTTCACCTGGGCTTCAGAGTCGCCAAAACATGAACCAACTCCGTTCAAGTTACCCATCCAACTTGTCATCGTCTCCTGTGAGGAAGCCCTCGTCATTCGGGCTTGACTCACCTGCAGCATTGGCAGCAGCAGTTATGAATTCAAGGTCTGCAGCCTTTGCAAAGCGGAGCCATAGTTTCATTGACCGTGGAGCAGTAACCCATCATCCAGGGTTTACATCGGCTGCTAACTCAAACACCATGATGTCGTCTTCGGATTGGAACTCCCCAAGTGGGAAATTGGATTGGGGAATTCAAGGAGATGATCTGAACAAGCTGAGGAAGTCTGCTTCTTTTGGGTTCAGAAGCAACAATGCTGGAACGCCAAACAACATGATGCCATCAGCTCTTGACGAGCCAGATGTGTCTTGGGTCAATTCTCTGGTGAAAGATGTTTCTTCTGAGAGGTCCGAGATGTTTGGTACAGAGAGGCAGAACTATCGTCAGTTGAACAAGGGGGTTCATGAAATGCTTCCGTCATGGGCGGAGCAGATGTATATAGAACAGGAGCAGAGGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0098542 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 zf-CCCH

Protein Analysis

673

Amino Acids

74.02

Weight (kDa)

6.89

Isoelectric Point (pI)

57.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	76 - 142	5e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	82 - 128	2.8e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	223 - 256	9.1e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40140 AT2G40140 AT3G55980 AT3G55980
fragaria_vesca	FvH4_7g24560
malus_domestica	MD01G1154000.v1.1 MD07G1222900.v1.1
prunus_persica	Prupe.2G251000_v2.0.a1 Prupe.2G251000_v2.0.a1
pyrus_communis	pycom01g17130 pycom07g20150
rosa_chinensis	RchiOBHm_Chr1g0370401
rosa_laevigata	RLG00000027051
rosa_multiflora	Rmu_co8338923.1_g000001 Rmu_sc0005656.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286610
rosa_rugosa	Rorug01G0356200
rosa_samantha	Rh1AG364600 Rh1BG327800 Rh1CG340800 Rh1DG358100
rosa_wichuraiana	Rw1G032080 Rw1G032130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1189, 1582
Acc36I	ACCTGC	2 cut(s)	1189, 1582
AccB7I	CCANNNNNTGG	1 cut(s)	186
AciI	CCGC	9 cut(s)	239, 366, 435, 471, 817, 898, 1095, 1627, 1985
AclWI	GGATC	2 cut(s)	1403, 1408
AcsI	RAATTY	5 cut(s)	37, 56, 1250, 1600, 1752
AcuI	CTGAAG	3 cut(s)	563, 984, 1460
AfaI	GTAC	2 cut(s)	680, 1924
AfeI	AGCGCT	2 cut(s)	1033, 1225
AfiI	CCNNNNNNNGG	5 cut(s)	186, 913, 1142, 1432, 1734
AgsI	TTSAA	9 cut(s)	280, 478, 523, 688, 1372, 1509, 1605, 1757, 1951
AjnI	CCWGG	5 cut(s)	704, 875, 1195, 1468, 1669
AleI	CACNNNNGTG	1 cut(s)	750
AloI	GAACNNNNNNTCC	2 cut(s)	643, 675
AluBI	AGCT	7 cut(s)	183, 397, 795, 1064, 1192, 1777, 1847
AluI	AGCT	7 cut(s)	183, 397, 795, 1064, 1192, 1777, 1847
Alw21I	GWGCWC	1 cut(s)	704
Alw26I	GTCTC	6 cut(s)	486, 765, 1119, 1326, 1331, 1539
AlwI	GGATC	2 cut(s)	1403, 1408
AlwNI	CAGNNNCTG	1 cut(s)	586
Aor51HI	AGCGCT	2 cut(s)	1033, 1225
AoxI	GGCC	3 cut(s)	177, 504, 708
ApoI	RAATTY	5 cut(s)	37, 56, 1250, 1600, 1752
ArsI	GACNNNNNNTTYG	2 cut(s)	1379, 1411
Asp700I	GAANNNNTTC	2 cut(s)	161, 1971
AspA2I	CCTAGG	1 cut(s)	1013
AspLEI	GCGC	3 cut(s)	975, 1034, 1226
AspS9I	GGNCC	4 cut(s)	318, 708, 726, 1908
AsuC2I	CCSGG	1 cut(s)	750
AsuII	TTCGAA	1 cut(s)	225
AvaII	GGWCC	3 cut(s)	318, 726, 1908
AvrII	CCTAGG	1 cut(s)	1013
BaeGI	GKGCMC	1 cut(s)	737
BanII	GRGCYC	1 cut(s)	1058
BarI	GAAGNNNNNNTAC	2 cut(s)	773, 805
BauI	CACGAG	1 cut(s)	1227
BbsI	GAAGAC	2 cut(s)	84, 1704
Bbv12I	GWGCWC	1 cut(s)	704
BbvCI	CCTCAGC	1 cut(s)	1778
BccI	CCATC	7 cut(s)	211, 1084, 1240, 1345, 1525, 1671, 1849
BceAI	ACGGC	1 cut(s)	682
BcgI	CGANNNNNNTGC	2 cut(s)	1922, 1956
BciT130I	CCWGG	5 cut(s)	706, 877, 1197, 1470, 1671
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	1 cut(s)	559
BcnI	CCSGG	1 cut(s)	750
BcoDI	GTCTC	6 cut(s)	486, 765, 1119, 1326, 1331, 1539
BfaI	CTAG	2 cut(s)	1014, 1256
BfmI	CTRYAG	2 cut(s)	1575, 1611
BfoI	RGCGCY	2 cut(s)	1035, 1227
BfuAI	ACCTGC	2 cut(s)	1189, 1582
BfuI	GTATCC	1 cut(s)	795
BlnI	CCTAGG	1 cut(s)	1013
Bme1390I	CCNGG	6 cut(s)	706, 750, 877, 1197, 1470, 1671
Bme18I	GGWCC	3 cut(s)	318, 726, 1908
BmgT120I	GGNCC	4 cut(s)	318, 708, 726, 1908
BmiI	GGNNCC	3 cut(s)	370, 570, 1631
BmrFI	CCNGG	6 cut(s)	706, 750, 877, 1197, 1470, 1671
BmrI	ACTGGG	2 cut(s)	971, 1447
BmsI	GCATC	7 cut(s)	121, 397, 409, 419, 917, 1106, 1827
BmuI	ACTGGG	2 cut(s)	971, 1447
BpiI	GAAGAC	2 cut(s)	84, 1704
BpmI	CTGGAG	2 cut(s)	688, 1056
Bpu10I	CCTNAGC	1 cut(s)	1778
Bpu14I	TTCGAA	1 cut(s)	225
BpuEI	CTTGAG	3 cut(s)	404, 478, 1204
BpuMI	CCSGG	1 cut(s)	750
BsaI	GGTCTC	1 cut(s)	765
BsaXI	ACNNNNNCTCC	6 cut(s)	503, 533, 1621, 1651, 1979, 2009
Bsc4I	CCNNNNNNNGG	5 cut(s)	186, 913, 1142, 1432, 1734
Bse1I	ACTGG	4 cut(s)	728, 928, 977, 1453
Bse3DI	GCAATG	1 cut(s)	629
BseBI	CCWGG	5 cut(s)	706, 877, 1197, 1470, 1671
BseGI	GGATG	6 cut(s)	883, 932, 1318, 1337, 1517, 1666
BseLI	CCNNNNNNNGG	5 cut(s)	186, 913, 1142, 1432, 1734
BseMI	GCAATG	1 cut(s)	629
BseMII	CTCAG	3 cut(s)	801, 1769, 1893
BseNI	ACTGG	4 cut(s)	728, 928, 977, 1453
BseRI	GAGGAG	3 cut(s)	22, 781, 1321
BseSI	GKGCMC	1 cut(s)	737
BshFI	GGCC	3 cut(s)	179, 506, 710
BsiHKAI	GWGCWC	1 cut(s)	704
BsiSI	CCGG	1 cut(s)	750
BslFI	GGGAC	2 cut(s)	785, 1408
BslI	CCNNNNNNNGG	5 cut(s)	186, 913, 1142, 1432, 1734
BsmAI	GTCTC	6 cut(s)	486, 765, 1119, 1326, 1331, 1539
BsmBI	CGTCTC	2 cut(s)	1331, 1539
BsmFI	GGGAC	2 cut(s)	785, 1408
BsmI	GAATGC	1 cut(s)	763
BsnI	GGCC	3 cut(s)	179, 506, 710
Bso31I	GGTCTC	1 cut(s)	765
Bsp119I	TTCGAA	1 cut(s)	225
Bsp1286I	GDGCHC	3 cut(s)	704, 737, 1058
Bsp1407I	TGTACA	1 cut(s)	678
Bsp143I	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
Bsp19I	CCATGG	1 cut(s)	507
BspACI	CCGC	9 cut(s)	239, 366, 435, 471, 817, 898, 1095, 1627, 1985
BspANI	GGCC	3 cut(s)	179, 506, 710
BspCNI	CTCAG	3 cut(s)	802, 1770, 1894
BspHI	TCATGA	2 cut(s)	718, 1963
BspLI	GGNNCC	3 cut(s)	370, 570, 1631
BspMAI	CTGCAG	2 cut(s)	1579, 1615
BspMI	ACCTGC	2 cut(s)	1189, 1582
BspPI	GGATC	2 cut(s)	1403, 1408
BspT104I	TTCGAA	1 cut(s)	225
BspTNI	GGTCTC	1 cut(s)	765
BsrDI	GCAATG	1 cut(s)	629
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	4 cut(s)	728, 928, 977, 1453
BssMI	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
BssSI	CACGAG	1 cut(s)	1227
BssT1I	CCWWGG	4 cut(s)	270, 507, 776, 1013
Bst2BI	CACGAG	1 cut(s)	1227
Bst2UI	CCWGG	5 cut(s)	706, 877, 1197, 1470, 1671
Bst4CI	ACNGT	3 cut(s)	74, 353, 1649
Bst6I	CTCTTC	6 cut(s)	147, 190, 222, 379, 960, 1135
BstAPI	GCANNNNNTGC	1 cut(s)	1619
BstAUI	TGTACA	1 cut(s)	678
BstBI	TTCGAA	1 cut(s)	225
BstC8I	GCNNGC	5 cut(s)	181, 364, 1030, 1205, 1434
BstDEI	CTNAG	5 cut(s)	15, 810, 1137, 1778, 1902
BstDSI	CCRYGG	3 cut(s)	507, 990, 1648
BstENI	CCTNNNNNAGG	1 cut(s)	911
BstF5I	GGATG	6 cut(s)	883, 932, 1318, 1337, 1517, 1666
BstH2I	RGCGCY	2 cut(s)	1035, 1227
BstHHI	GCGC	3 cut(s)	975, 1034, 1226
BstKTI	GATC	5 cut(s)	249, 562, 1403, 1411, 1768
BstMAI	GTCTC	6 cut(s)	486, 765, 1119, 1326, 1331, 1539
BstMBI	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
BstMWI	GCNNNNNNNGC	5 cut(s)	1223, 1294, 1583, 1586, 1619
BstNI	CCWGG	5 cut(s)	706, 877, 1197, 1470, 1671
BstSCI	CCNGG	6 cut(s)	704, 748, 875, 1195, 1468, 1669
BstSFI	CTRYAG	2 cut(s)	1575, 1611
BstSLI	GKGCMC	1 cut(s)	737
BstV2I	GAAGAC	2 cut(s)	84, 1704
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	3 cut(s)	179, 506, 710
BtgI	CCRYGG	3 cut(s)	507, 990, 1648
BtsCI	GGATG	6 cut(s)	883, 932, 1318, 1337, 1517, 1666
BtsI	GCAGTG	1 cut(s)	357
BtsIMutI	CAGTG	3 cut(s)	349, 357, 984
BveI	ACCTGC	2 cut(s)	1189, 1582
Cac8I	GCNNGC	5 cut(s)	181, 364, 1030, 1205, 1434
CaiI	CAGNNNCTG	1 cut(s)	586
CciI	TCATGA	2 cut(s)	718, 1963
CfoI	GCGC	3 cut(s)	975, 1034, 1226
Cfr13I	GGNCC	4 cut(s)	318, 708, 726, 1908
Csp6I	GTAC	2 cut(s)	679, 1923
CspCI	CAANNNNNGTGG	2 cut(s)	1167, 1202
CviQI	GTAC	2 cut(s)	679, 1923
DdeI	CTNAG	5 cut(s)	15, 810, 1137, 1778, 1902
DpnI	GATC	5 cut(s)	248, 561, 1402, 1410, 1767
DpnII	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
Eam1104I	CTCTTC	6 cut(s)	147, 190, 222, 379, 960, 1135
EarI	CTCTTC	6 cut(s)	147, 190, 222, 379, 960, 1135
EciI	GGCGGA	1 cut(s)	2000
Eco130I	CCWWGG	4 cut(s)	270, 507, 776, 1013
Eco24I	GRGCYC	1 cut(s)	1058
Eco31I	GGTCTC	1 cut(s)	765
Eco32I	GATATC	1 cut(s)	640
Eco47I	GGWCC	3 cut(s)	318, 726, 1908
Eco47III	AGCGCT	2 cut(s)	1033, 1225
Eco57I	CTGAAG	3 cut(s)	563, 984, 1460
EcoNI	CCTNNNNNAGG	1 cut(s)	911
EcoO109I	RGGNCCY	2 cut(s)	318, 708
EcoRI	GAATTC	2 cut(s)	1600, 1752
EcoRII	CCWGG	5 cut(s)	704, 875, 1195, 1468, 1669
EcoRV	GATATC	1 cut(s)	640
EcoT14I	CCWWGG	4 cut(s)	270, 507, 776, 1013
EcoT22I	ATGCAT	1 cut(s)	412
EcoT38I	GRGCYC	1 cut(s)	1058
ErhI	CCWWGG	4 cut(s)	270, 507, 776, 1013
Esp3I	CGTCTC	2 cut(s)	1331, 1539
FalI	AAGNNNNNCTT	2 cut(s)	929, 961
FaqI	GGGAC	2 cut(s)	785, 1408
FauI	CCCGC	1 cut(s)	478
FauNDI	CATATG	1 cut(s)	1305
FbaI	TGATCA	1 cut(s)	559
FokI	GGATG	6 cut(s)	870, 939, 1324, 1325, 1504, 1653
FriOI	GRGCYC	1 cut(s)	1058
FspBI	CTAG	2 cut(s)	1014, 1256
GlaI	GCGC	3 cut(s)	974, 1033, 1225
GsuI	CTGGAG	2 cut(s)	688, 1056
HaeII	RGCGCY	2 cut(s)	1035, 1227
HaeIII	GGCC	3 cut(s)	179, 506, 710
HapII	CCGG	1 cut(s)	750
HhaI	GCGC	3 cut(s)	975, 1034, 1226
Hin6I	GCGC	3 cut(s)	973, 1032, 1224
HinP1I	GCGC	3 cut(s)	973, 1032, 1224
HincII	GTYRAC	2 cut(s)	457, 1168
HindII	GTYRAC	2 cut(s)	457, 1168
HinfI	GANTC	5 cut(s)	64, 293, 872, 1480, 1568
HpaI	GTTAAC	1 cut(s)	1168
HpaII	CCGG	1 cut(s)	750
Hpy166II	GTNNAC	6 cut(s)	457, 681, 745, 1073, 1168, 1677
Hpy188III	TCNNGA	8 cut(s)	128, 139, 495, 563, 719, 1229, 1850, 1964
Hpy8I	GTNNAC	6 cut(s)	457, 681, 745, 1073, 1168, 1677
HpyAV	CCTTC	6 cut(s)	356, 587, 829, 931, 1017, 1422
HpyCH4III	ACNGT	3 cut(s)	74, 353, 1649
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1223, 1294, 1583, 1586, 1619
HpyF3I	CTNAG	5 cut(s)	15, 810, 1137, 1778, 1902
HspAI	GCGC	3 cut(s)	973, 1032, 1224
Ksp22I	TGATCA	1 cut(s)	559
KspAI	GTTAAC	1 cut(s)	1168
Kzo9I	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
LmnI	GCTCC	5 cut(s)	707, 1629, 1652, 1987, 2008
LweI	GCATC	7 cut(s)	121, 397, 409, 419, 917, 1106, 1827
MaeI	CTAG	2 cut(s)	1014, 1256
MaeIII	GTNAC	6 cut(s)	337, 430, 534, 1455, 1511, 1657
MalI	GATC	5 cut(s)	248, 561, 1402, 1410, 1767
MboI	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
MfeI	CAATTG	2 cut(s)	1119, 1427
MhlI	GDGCHC	3 cut(s)	704, 737, 1058
MlyI	GAGTC	4 cut(s)	287, 881, 1489, 1562
MmeI	TCCRAC	1 cut(s)	1545
Mph1103I	ATGCAT	1 cut(s)	412
MroXI	GAANNNNTTC	2 cut(s)	161, 1971
MseI	TTAA	1 cut(s)	1167
MslI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1703
MspA1I	CMGCKG	1 cut(s)	795
MspI	CCGG	1 cut(s)	750
MspR9I	CCNGG	6 cut(s)	706, 750, 877, 1197, 1470, 1671
MunI	CAATTG	2 cut(s)	1119, 1427
Mva1269I	GAATGC	1 cut(s)	763
MvaI	CCWGG	5 cut(s)	706, 877, 1197, 1470, 1671
MwoI	GCNNNNNNNGC	5 cut(s)	1223, 1294, 1583, 1586, 1619
NciI	CCSGG	1 cut(s)	750
NcoI	CCATGG	1 cut(s)	507
NdeI	CATATG	1 cut(s)	1305
NdeII	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
NlaIV	GGNNCC	3 cut(s)	370, 570, 1631
NmuCI	GTSAC	2 cut(s)	430, 534
NsiI	ATGCAT	1 cut(s)	412
NspV	TTCGAA	1 cut(s)	225
OliI	CACNNNNGTG	1 cut(s)	750
PagI	TCATGA	2 cut(s)	718, 1963
PaqCI	CACCTGC	2 cut(s)	1189, 1582
PctI	GAATGC	1 cut(s)	763
PdmI	GAANNNNTTC	2 cut(s)	161, 1971
PfeI	GAWTC	1 cut(s)	64
PflMI	CCANNNNNTGG	1 cut(s)	186
PleI	GAGTC	4 cut(s)	287, 880, 1488, 1562
PpsI	GAGTC	4 cut(s)	287, 880, 1488, 1562
PpuMI	RGGWCCY	1 cut(s)	318
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	5 cut(s)	704, 875, 1195, 1468, 1669
PspGI	CCWGG	5 cut(s)	704, 875, 1195, 1468, 1669
PspN4I	GGNNCC	3 cut(s)	370, 570, 1631
PspPI	GGNCC	4 cut(s)	318, 708, 726, 1908
PspPPI	RGGWCCY	1 cut(s)	318
PstI	CTGCAG	2 cut(s)	1579, 1615
PstNI	CAGNNNCTG	1 cut(s)	586
PvuII	CAGCTG	1 cut(s)	795
RsaI	GTAC	2 cut(s)	680, 1924
RsaNI	GTAC	2 cut(s)	679, 1923
RseI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1703
SaqAI	TTAA	1 cut(s)	1167
Sau3AI	GATC	5 cut(s)	246, 559, 1400, 1408, 1765
Sau96I	GGNCC	4 cut(s)	318, 708, 726, 1908
SchI	GAGTC	4 cut(s)	287, 881, 1489, 1562
ScrFI	CCNGG	6 cut(s)	706, 750, 877, 1197, 1470, 1671
SduI	GDGCHC	3 cut(s)	704, 737, 1058
SfaNI	GCATC	7 cut(s)	121, 397, 409, 419, 917, 1106, 1827
SfcI	CTRYAG	2 cut(s)	1575, 1611
SfuI	TTCGAA	1 cut(s)	225
SinI	GGWCC	3 cut(s)	318, 726, 1908
SmiMI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1703
SmlI	CTYRAG	3 cut(s)	383, 493, 1219
SmoI	CTYRAG	3 cut(s)	383, 493, 1219
SsiI	CCGC	9 cut(s)	239, 366, 435, 471, 817, 898, 1095, 1627, 1985
SspMI	CTAG	2 cut(s)	1014, 1256
StyD4I	CCNGG	6 cut(s)	704, 748, 875, 1195, 1468, 1669
StyI	CCWWGG	4 cut(s)	270, 507, 776, 1013
TaaI	ACNGT	3 cut(s)	74, 353, 1649
TaqI	TCGA	3 cut(s)	129, 225, 870
TaqII	GACCGA	1 cut(s)	743
TatI	WGTACW	1 cut(s)	678
TfiI	GAWTC	1 cut(s)	64
Tru1I	TTAA	1 cut(s)	1167
Tru9I	TTAA	1 cut(s)	1167
TscAI	CASTG	3 cut(s)	356, 364, 984
TseFI	GTSAC	2 cut(s)	430, 534
Tsp45I	GTSAC	2 cut(s)	430, 534
TspDTI	ATGAA	8 cut(s)	31, 69, 872, 1508, 1613, 1630, 1952, 1980
TspGWI	ACGGA	2 cut(s)	1493, 1965
TspRI	CASTG	3 cut(s)	356, 364, 984
Van91I	CCANNNNNTGG	1 cut(s)	186
VpaK11BI	GGWCC	3 cut(s)	318, 726, 1908
XagI	CCTNNNNNAGG	1 cut(s)	911
XapI	RAATTY	5 cut(s)	37, 56, 1250, 1600, 1752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1866
XmaJI	CCTAGG	1 cut(s)	1013
XmnI	GAANNNNTTC	2 cut(s)	161, 1971
XspI	CTAG	2 cut(s)	1014, 1256
Zsp2I	ATGCAT	1 cut(s)	412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.