RchiOBHm_Chr1g0359681

RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
51551467 .. 51555235
3769 bp
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UTR
Exon/CDS
Intron
PRQ58471

Sequence Viewer

Length: 150 bp
ATGGAGAACTTGCAAATAGGGCTGTGGAGATTGATATGCCGATCATGGTTCAGGTACTATGAAGGACAGTTTGCTCCTATTTCGGAAATAGATGTCGAAGAAGTTGAGGCGCCAGCGATCAGTGTGGTGGAAGCTACCAAGAAGAGCTGA

Protein Analysis

49

Amino Acids

5.7

Weight (kDa)

4.64

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 109
AcyI GRCGYC 1 cut(s) 110
AfaI GTAC 1 cut(s) 56
AluBI AGCT 2 cut(s) 134, 147
AluI AGCT 2 cut(s) 134, 147
AspLEI GCGC 1 cut(s) 112
BanI GGYRCC 1 cut(s) 109
BfoI RGCGCY 1 cut(s) 113
BmiI GGNNCC 1 cut(s) 111
BsaHI GRCGYC 1 cut(s) 110
BshNI GGYRCC 1 cut(s) 109
Bsp143I GATC 2 cut(s) 41, 117
BspLI GGNNCC 1 cut(s) 111
BspQI GCTCTTC 1 cut(s) 137
BspT107I GGYRCC 1 cut(s) 109
BssMI GATC 2 cut(s) 41, 117
BssNI GRCGYC 1 cut(s) 110
Bst4CI ACNGT 1 cut(s) 69
Bst6I CTCTTC 1 cut(s) 137
BstACI GRCGYC 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 114
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 1 cut(s) 112
BstKTI GATC 2 cut(s) 44, 120
BstMBI GATC 2 cut(s) 41, 117
BstMWI GCNNNNNNNGC 1 cut(s) 19
BtsIMutI CAGTG 1 cut(s) 127
Cac8I GCNNGC 1 cut(s) 114
CfoI GCGC 1 cut(s) 112
Csp6I GTAC 1 cut(s) 55
CviAII CATG 1 cut(s) 45
CviJI RGCY 3 cut(s) 22, 134, 147
CviKI_1 RGCY 3 cut(s) 22, 134, 147
CviQI GTAC 1 cut(s) 55
DinI GGCGCC 1 cut(s) 111
DpnI GATC 2 cut(s) 43, 119
DpnII GATC 2 cut(s) 41, 117
Eam1104I CTCTTC 1 cut(s) 137
EarI CTCTTC 1 cut(s) 137
EgeI GGCGCC 1 cut(s) 111
EheI GGCGCC 1 cut(s) 111
FaeI CATG 1 cut(s) 48
FaiI YATR 3 cut(s) 37, 46, 60
FatI CATG 1 cut(s) 44
GlaI GCGC 1 cut(s) 111
HaeII RGCGCY 1 cut(s) 113
HhaI GCGC 1 cut(s) 112
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 1 cut(s) 48
Hin6I GCGC 1 cut(s) 110
HinP1I GCGC 1 cut(s) 110
Hpy188I TCNGA 1 cut(s) 85
HpyAV CCTTC 1 cut(s) 56
HpyCH4III ACNGT 1 cut(s) 69
HpyCH4V TGCA 1 cut(s) 13
HpyF10VI GCNNNNNNNGC 1 cut(s) 19
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 1 cut(s) 48
HspAI GCGC 1 cut(s) 110
KasI GGCGCC 1 cut(s) 109
Kzo9I GATC 2 cut(s) 41, 117
LguI GCTCTTC 1 cut(s) 137
LmnI GCTCC 1 cut(s) 79
LpnPI CCDG 2 cut(s) 37, 126
MalI GATC 2 cut(s) 43, 119
MboI GATC 2 cut(s) 41, 117
MboII GAAGA 1 cut(s) 110
Mly113I GGCGCC 1 cut(s) 110
MnlI CCTC 1 cut(s) 100
MwoI GCNNNNNNNGC 1 cut(s) 19
NarI GGCGCC 1 cut(s) 110
NdeII GATC 2 cut(s) 41, 117
NlaIII CATG 1 cut(s) 48
NlaIV GGNNCC 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 137
PluTI GGCGCC 1 cut(s) 113
PspN4I GGNNCC 1 cut(s) 111
RsaI GTAC 1 cut(s) 56
RsaNI GTAC 1 cut(s) 55
SapI GCTCTTC 1 cut(s) 137
Sau3AI GATC 2 cut(s) 41, 117
SetI ASST 3 cut(s) 56, 136, 149
SfoI GGCGCC 1 cut(s) 111
SgeI CNNG 4 cut(s) 22, 57, 64, 125
SspDI GGCGCC 1 cut(s) 109
TaaI ACNGT 1 cut(s) 69
TaqI TCGA 1 cut(s) 96
TscAI CASTG 1 cut(s) 127
TspDTI ATGAA 1 cut(s) 75
TspRI CASTG 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.