RLG00000024147

RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
32471864 .. 32473113
1250 bp
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UTR
Exon/CDS
Intron
RLM00000024147

Sequence Viewer

Length: 318 bp
ATGCTTTGGTGTAGAATGACATCTCCATTCTACATGGTTACAGTTCTGAGGAGGTTAAGGTTGCAGAAGGCTAAAAGTGGCAGGGAATTGAAGGACAATGTTATAATATTTCTAAGATTTGCTCCTATTTCGGAAATAGATGTCGAAGAAGTTGAGGTGCCAGCTGTCAGTGTGGTGGAAGCTACCAAGAAGGTTTCATTGCTTGAGGAAAATATAAAACCCAGAACAAATCTTCCCCATTTGCTGGTGCATCTTCATGAAAGACAACCAGATTTAGCGTTTAACTCTGCTTATTCCCTGCCACTTAACTCTGGTTAA

Protein Analysis

106

Amino Acids

12.05

Weight (kDa)

8.89

Isoelectric Point (pI)

59.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 104
AccB1I GGYRCC 1 cut(s) 157
AccB7I CCANNNNNTGG 1 cut(s) 244
AfiI CCNNNNNNNGG 1 cut(s) 244
AgsI TTSAA 1 cut(s) 91
AloI GAACNNNNNNTCC 2 cut(s) 217, 249
AluBI AGCT 2 cut(s) 164, 182
AluI AGCT 2 cut(s) 164, 182
BanI GGYRCC 1 cut(s) 157
BmiI GGNNCC 1 cut(s) 159
BmsI GCATC 1 cut(s) 259
BpuEI CTTGAG 1 cut(s) 224
Bsc4I CCNNNNNNNGG 1 cut(s) 244
Bse3DI GCAATG 1 cut(s) 197
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMI GCAATG 1 cut(s) 197
BseMII CTCAG 1 cut(s) 38
BseRI GAGGAG 1 cut(s) 64
BshNI GGYRCC 1 cut(s) 157
BslI CCNNNNNNNGG 1 cut(s) 244
BspCNI CTCAG 1 cut(s) 39
BspHI TCATGA 1 cut(s) 256
BspLI GGNNCC 1 cut(s) 159
BspT107I GGYRCC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 197
Bst4CI ACNGT 1 cut(s) 43
BstC8I GCNNGC 1 cut(s) 162
BstDEI CTNAG 2 cut(s) 47, 113
BtsIMutI CAGTG 1 cut(s) 175
Cac8I GCNNGC 1 cut(s) 162
CciI TCATGA 1 cut(s) 256
CviAII CATG 2 cut(s) 34, 257
CviJI RGCY 3 cut(s) 71, 164, 182
CviKI_1 RGCY 3 cut(s) 71, 164, 182
DdeI CTNAG 2 cut(s) 47, 113
FaeI CATG 2 cut(s) 37, 260
FaiI YATR 4 cut(s) 35, 104, 215, 258
FatI CATG 2 cut(s) 33, 256
Hin1II CATG 2 cut(s) 37, 260
Hpy188I TCNGA 2 cut(s) 48, 133
Hpy188III TCNNGA 1 cut(s) 257
HpyAV CCTTC 3 cut(s) 61, 85, 184
HpyCH4III ACNGT 1 cut(s) 43
HpyCH4V TGCA 2 cut(s) 64, 250
HpyF3I CTNAG 2 cut(s) 47, 113
Hsp92II CATG 2 cut(s) 37, 260
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 7 cut(s) 67, 174, 230, 235, 282, 297, 311
LweI GCATC 1 cut(s) 259
MaeIII GTNAC 1 cut(s) 37
MboII GAAGA 3 cut(s) 158, 224, 245
MluCI AATT 1 cut(s) 86
MnlI CCTC 4 cut(s) 42, 45, 148, 199
MseI TTAA 4 cut(s) 56, 282, 306, 316
MslI CAYNNNNRTG 1 cut(s) 255
MspA1I CMGCKG 1 cut(s) 164
NlaIII CATG 2 cut(s) 37, 260
NlaIV GGNNCC 1 cut(s) 159
PagI TCATGA 1 cut(s) 256
PflMI CCANNNNNTGG 1 cut(s) 244
PsiI TTATAA 1 cut(s) 104
PspN4I GGNNCC 1 cut(s) 159
PvuII CAGCTG 1 cut(s) 164
RseI CAYNNNNRTG 1 cut(s) 255
SaqAI TTAA 4 cut(s) 56, 282, 306, 316
SetI ASST 6 cut(s) 56, 62, 159, 166, 184, 195
SfaNI GCATC 1 cut(s) 259
SmiMI CAYNNNNRTG 1 cut(s) 255
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
Sse9I AATT 1 cut(s) 86
SspI AATATT 1 cut(s) 108
TaaI ACNGT 1 cut(s) 43
TaqI TCGA 1 cut(s) 144
TasI AATT 1 cut(s) 86
Tru1I TTAA 4 cut(s) 56, 282, 306, 316
Tru9I TTAA 4 cut(s) 56, 282, 306, 316
TscAI CASTG 1 cut(s) 175
TspDTI ATGAA 3 cut(s) 186, 245, 273
TspRI CASTG 1 cut(s) 175
Van91I CCANNNNNTGG 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.