Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016604

Physical Location & Seq

Genomic Coordinates Forward (+)

53322765 .. 53327918

Gene Structure 5154 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58622

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGTTACCTCTATCATCTCTAGCTTCCTTTCTTCTCCTTACCTTCTTTAAGTTCTTAGCCATTTCTCACTCTCTCCAGGAACAACACCAGCTACCACGACCAAATTTGTGCCATGAAAAATGTGGAGACCTTCAAATCTCCTTCCCATTTCACTTAAACAAATCCTGTTCTTCACTCTCTGATGCTTTCCATCTCTCTTGCGTCAACTCAACTAACATTTTCCTTAACATTGGTTCCGAAAGCTACCGCGTCCTCGAATTCTTCTCTGATGGTTTGCTAGTGGATTTTCCAGGCTCCTCTTCCTACTGCCGCCAGTACAATGACTTGAACTCCTTTGATTTCTTAGGAAATGACCACTTTGGCCTCTCTGCTGACAATGTCATAGGCCTCTATGATTGTGAGGACTCTTCTCTGTGCAAAACAGAATGTGAAACCATTGACTTGCCTGGCTGTGATGGCAATGAAAGCCAAGGCTCTCCTGCTTGCTGCTACCCTCTTTCTGATTACAGCCTGTGGCATCTTGGTGACAAGTTCTCAGTGTTTTCCAAATTTGGGTGCAGGGGCTTCTCAAGTTGGGTTGTTCAGAGAGGCTCCAACTTGGGAAAGAGAGGGGTAAAGTTGGAATGGGCAGTGCCAAGAAACTCATCCAAGGGGGTTTGTGCTACCAATGGTTACATTATCAATGCCACATCAATTCAAGCAGGGGTTAGGTGTGCTTGTCAAGATGGGTTCATTGGTGATGGATTTGCAACTGGAGAAGGATGCATCATGTCCTGCATCAAAGAGAGGAGGGAAGCATATGGGGCAGATTGCTTCAAAAAAAGGCATGGTAGCAAGAAACTTTTAATTATAGTAGGAGTTCTTGCTCCCCTCTTCATCATAGCCTCATTGATTGCACTTCTGTATCTACTCAAAAGGCCTGTTAAACCGGGAACGTTTGATCCAGCTCAGAAGGTTCACTTCCACAGCACCATATCATTCCGAAAAGCTAGCAGGACTCGGCTATTCACTTACCATGAGCTAGAGGAAGCTACCAAAGCATTTGAAGAGGATCAGAAGCTTGTAAGTGGAAATAATGGCACAATATTTTCTGGGGTTCTCGGGGATGGATCCCACATTGCTGTGCACAAGATAGATTGTGAGAATGAAAAAGACTTGATTCAAGTCCTATCACAGATTGAGGCTTTGTCTGCTATTCTACACCGGAGTATAACCCGATTTCTTGGATGCTGTATTGACTTGGCCTACACTCCACTACTGGTGCATGAATATCCAGCAAACGGTACCCTCGAGGATCATTTACACCAAACAGGAGGACAACATGTTGCTCTTGACTGGTACAAGAGGTTGAACATTGCTGCTGAAACAGCAAGTGTTCTTGCCTTTTTGCAGTATGAAATTTCTCCTCCCATTTTCCACTGTGATCTCAAGTCCGGTTATATCTTTATTGATAATGACTTTTGTAGTAAACTCTGTGGTTTTGGACTACTGGTTTCGAGGCATGAAGAAGGATCGCGTTTTCAAAGAACAGATGTTTATGCTTTAGGTGTGGTGCTTCTTGAGATGATTGCAGGCTCAAACTGCTTGGACTTGCAAATATCCCTGCAAAAGATAAGAGGTGGGAAGCTAGAAGAGATTGTGGATCCACTTCTTTACTATCATGAACAACCTTCCTATCACCGCGAGCAAATAGAGACAGTTGCAGATCTTGCAATGAGGTGTTTGTTGTTTGGTGGAGATGGAAAGCTAGGAATGTATGATGTAGCCAAGGAATTAGTACATATCAGAAGAGAGAGCAGTGATGGGGGTAGCAAGAGAGGGCCTGCACTTGAGGAAACGTTTTCGAACTCCAGCCTCCTTCAGATGATATCAATGTCTCCTGATTCAGCATACAGATGGGAATGCCTCAGAATTTTTGACCAACTTCCTCTTTTCTCTCAACCTCTTTCCTTTTTTACATACTATAAATATTTTGATCCAAATAGTGCAAGCCTTGGCACTTATTCGTCCTCTCTTTCAAGTTTCTGTCTCTACTCCCAAATAGCACTAGCCATCAAGATGACTGATGAAAAAAAACCAACTCCGAAATTAAATGAGAGGATTCTTTCATCTTTGTCAAGGAAATCAGTTGCTGCACATCCTTGGCATGATCTTGAAATTGGACCATCAGCTCCCCAAATTTTCAATGTTGTTGTTGAGATATCACAGGGAAGCAAAGTCAAATATGAACTTGACAAGAAAACAGGATTAATCAAGGTTGATCGGATTTTGTACTCGTCAGTGGTCTATCCTCATAACTATGGTTTCATCCCTCGCACCTTGTGTGAAGACAATGATCCACTGGATGTCTTAGTTCTCATGCAGGAACCTGTTATTCCGGGTGCATTTCTGCGTGCCAAAGCCATTGGACTAATGCCCATGATTGACCAGGGAGAGAAAGATGATAAGATCATTGCAGTATGTGCTGATGATCCAGCCTATAATCATTACAGTGATATCGGAGAGCTTCCTCCTCATCGCCTCACTGAGATTCGTCGCTTCTTTGAAGACTACAAGAAGAATGAACACAAAGAGGTTGCAGTGGACGAGTTTTTGCCTTGCTCAACTGCCGCGGAAGCTATTCAGTACTCGATGGATCTTTATGCCGAGTACATAATGCTCACCTTAAGGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase_Tyr

Protein Analysis

891

Amino Acids

99.63

Weight (kDa)

5.78

Isoelectric Point (pI)

44.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	37 - 87	2.5e-09	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	348 - 498	7.7e-12	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	351 - 500	1.6e-13	Protein tyrosine and serine/threonine kinase
Pyrophosphatase	PF00719	730 - 881	7.8e-56	Inorganic pyrophosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46850
fragaria_vesca	FvH4_7g17870
malus_domestica	MD01G1091100.v1.1 MD07G1161300.v1.1
prunus_persica	Prupe.2G200600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0361321
rosa_laevigata	RLG00000027725
rosa_roxburghii	Rroxscaffold_4G00295040
rosa_rugosa	Rorug01G0288300
rosa_samantha	Rh1AG299500 Rh1BG263300 Rh1CG280900 Rh1DG293400
rosa_wichuraiana	Rw1G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1289
Acc65I	GGTACC	1 cut(s)	1283
AccB1I	GGYRCC	1 cut(s)	1283
AccII	CGCG	4 cut(s)	249, 1516, 1683, 2612
AciI	CCGC	6 cut(s)	247, 310, 1681, 2610, 2612, 2671
AclI	AACGTT	2 cut(s)	935, 1838
AcsI	RAATTY	6 cut(s)	103, 257, 548, 1398, 1911, 2178
AcuI	CTGAAG	1 cut(s)	1844
AdeI	CACNNNGTG	1 cut(s)	2322
AfaI	GTAC	7 cut(s)	317, 1285, 1340, 1779, 2273, 2627, 2651
AfiI	CCNNNNNNNGG	3 cut(s)	552, 1280, 2670
AflII	CTTAAG	1 cut(s)	2665
AflIII	ACRYGT	1 cut(s)	1321
AjnI	CCWGG	4 cut(s)	75, 289, 445, 2427
AloI	GAACNNNNNNTCC	2 cut(s)	925, 957
Alw21I	GWGCWC	1 cut(s)	1128
Alw26I	GTCTC	4 cut(s)	120, 1688, 1881, 2033
Alw44I	GTGCAC	1 cut(s)	1124
AlwNI	CAGNNNCTG	1 cut(s)	2132
Ama87I	CYCGRG	2 cut(s)	1100, 1289
AoxI	GGCC	5 cut(s)	361, 385, 917, 1242, 1820
ApaLI	GTGCAC	1 cut(s)	1124
ApeKI	GCWGC	3 cut(s)	486, 1358, 2132
ApoI	RAATTY	6 cut(s)	103, 257, 548, 1398, 1911, 2178
AseI	ATTAAT	1 cut(s)	2249
Asp700I	GAANNNNTTC	1 cut(s)	2619
Asp718I	GGTACC	1 cut(s)	1283
AspS9I	GGNCC	2 cut(s)	1820, 2162
AsuC2I	CCSGG	2 cut(s)	930, 2379
AsuHPI	GGTGA	4 cut(s)	536, 749, 1670, 2653
AsuII	TTCGAA	1 cut(s)	1844
AsuNHI	GCTAGC	1 cut(s)	989
AvaI	CYCGRG	2 cut(s)	1100, 1289
AvaII	GGWCC	1 cut(s)	2162
BaeGI	GKGCMC	1 cut(s)	1128
BaeI	ACNNNNGTAYC	2 cut(s)	887, 920
BamHI	GGATCC	2 cut(s)	1109, 1642
BanI	GGYRCC	1 cut(s)	1283
BbsI	GAAGAC	2 cut(s)	2334, 2553
Bbv12I	GWGCWC	1 cut(s)	1128
BbvI	GCAGC	3 cut(s)	473, 1345, 2119
BciT130I	CCWGG	4 cut(s)	77, 291, 447, 2429
BcnI	CCSGG	2 cut(s)	930, 2379
BcoDI	GTCTC	4 cut(s)	120, 1688, 1881, 2033
BfaI	CTAG	7 cut(s)	20, 278, 990, 1022, 1628, 1748, 2048
BfrI	CTTAAG	1 cut(s)	2665
BglII	AGATCT	1 cut(s)	1705
BisI	GCNGC	5 cut(s)	310, 487, 1359, 2133, 2610
BlsI	GCNGC	5 cut(s)	311, 488, 1360, 2134, 2611
BmcAI	AGTACT	1 cut(s)	2627
Bme1390I	CCNGG	6 cut(s)	77, 291, 447, 930, 2379, 2429
Bme18I	GGWCC	1 cut(s)	2162
BmeT110I	CYCGRG	2 cut(s)	1100, 1289
BmgT120I	GGNCC	2 cut(s)	1820, 2162
BmiI	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1644, 2367
BmrFI	CCNGG	6 cut(s)	77, 291, 447, 930, 2379, 2429
BmsI	GCATC	6 cut(s)	172, 526, 752, 774, 786, 1217
BmtI	GCTAGC	1 cut(s)	993
BpiI	GAAGAC	2 cut(s)	2334, 2553
BpmI	CTGGAG	3 cut(s)	59, 774, 1834
Bpu14I	TTCGAA	1 cut(s)	1844
BpuEI	CTTGAG	4 cut(s)	553, 1412, 1580, 1850
BpuMI	CCSGG	2 cut(s)	930, 2379
BsaI	GGTCTC	1 cut(s)	120
BsaJI	CCNNGG	7 cut(s)	469, 648, 1767, 1993, 2141, 2428, 2610
BsaWI	WCCGGW	2 cut(s)	1203, 1433
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	3 cut(s)	552, 1280, 2670
Bse1I	ACTGG	6 cut(s)	313, 757, 1263, 1340, 1494, 2346
Bse3DI	GCAATG	5 cut(s)	466, 1116, 1353, 1719, 2451
BseBI	CCWGG	4 cut(s)	77, 291, 447, 2429
BseDI	CCNNGG	7 cut(s)	469, 648, 1767, 1993, 2141, 2428, 2610
BseGI	GGATG	7 cut(s)	644, 767, 1111, 1232, 2137, 2307, 2350
BseLI	CCNNNNNNNGG	3 cut(s)	552, 1280, 2670
BseMI	GCAATG	5 cut(s)	466, 1116, 1353, 1719, 2451
BseMII	CTCAG	4 cut(s)	549, 962, 1921, 2517
BseNI	ACTGG	6 cut(s)	313, 757, 1263, 1340, 1494, 2346
BseRI	GAGGAG	4 cut(s)	286, 802, 1395, 2502
BseSI	GKGCMC	1 cut(s)	1128
BseXI	GCAGC	3 cut(s)	473, 1345, 2119
BsgI	GTGCAG	3 cut(s)	577, 1809, 2118
Bsh1236I	CGCG	4 cut(s)	249, 1516, 1683, 2612
BshFI	GGCC	5 cut(s)	363, 387, 919, 1244, 1822
BshNI	GGYRCC	1 cut(s)	1283
BsiHKAI	GWGCWC	1 cut(s)	1128
BsiHKCI	CYCGRG	2 cut(s)	1100, 1289
BsiSI	CCGG	4 cut(s)	929, 1204, 1434, 2378
BslI	CCNNNNNNNGG	3 cut(s)	552, 1280, 2670
BsmAI	GTCTC	4 cut(s)	120, 1688, 1881, 2033
BsmI	GAATGC	1 cut(s)	1907
BsnI	GGCC	5 cut(s)	363, 387, 919, 1244, 1822
Bso31I	GGTCTC	1 cut(s)	120
BsoBI	CYCGRG	2 cut(s)	1100, 1289
Bsp119I	TTCGAA	1 cut(s)	1844
Bsp1286I	GDGCHC	1 cut(s)	1128
BspACI	CCGC	6 cut(s)	247, 310, 1681, 2610, 2612, 2671
BspANI	GGCC	5 cut(s)	363, 387, 919, 1244, 1822
BspCNI	CTCAG	4 cut(s)	548, 961, 1920, 2518
BspFNI	CGCG	4 cut(s)	249, 1516, 1683, 2612
BspHI	TCATGA	1 cut(s)	1660
BspLI	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1644, 2367
BspOI	GCTAGC	1 cut(s)	993
BspT104I	TTCGAA	1 cut(s)	1844
BspT107I	GGYRCC	1 cut(s)	1283
BspTI	CTTAAG	1 cut(s)	2665
BspTNI	GGTCTC	1 cut(s)	120
BsrDI	GCAATG	5 cut(s)	466, 1116, 1353, 1719, 2451
BsrI	ACTGG	6 cut(s)	313, 757, 1263, 1340, 1494, 2346
BssECI	CCNNGG	7 cut(s)	469, 648, 1767, 1993, 2141, 2428, 2610
BssT1I	CCWWGG	5 cut(s)	469, 648, 1767, 1993, 2141
Bst2UI	CCWGG	4 cut(s)	77, 291, 447, 2429
Bst4CI	ACNGT	4 cut(s)	1283, 1421, 1699, 2492
Bst6I	CTCTTC	6 cut(s)	304, 412, 878, 1041, 1626, 1783
BstAFI	CTTAAG	1 cut(s)	2665
BstAPI	GCANNNNNTGC	2 cut(s)	1709, 2462
BstBI	TTCGAA	1 cut(s)	1844
BstC8I	GCNNGC	7 cut(s)	484, 991, 1573, 1685, 1824, 1990, 2394
BstDEI	CTNAG	7 cut(s)	55, 343, 535, 948, 1907, 2350, 2526
BstDSI	CCRYGG	1 cut(s)	2610
BstF5I	GGATG	7 cut(s)	644, 767, 1111, 1232, 2137, 2307, 2350
BstFNI	CGCG	4 cut(s)	249, 1516, 1683, 2612
BstMAI	GTCTC	4 cut(s)	120, 1688, 1881, 2033
BstNI	CCWGG	4 cut(s)	77, 291, 447, 2429
BstNSI	RCATGY	1 cut(s)	1325
BstSCI	CCNGG	6 cut(s)	75, 289, 445, 928, 2377, 2427
BstSLI	GKGCMC	1 cut(s)	1128
BstUI	CGCG	4 cut(s)	249, 1516, 1683, 2612
BstV1I	GCAGC	3 cut(s)	473, 1345, 2119
BstV2I	GAAGAC	2 cut(s)	2334, 2553
BstX2I	RGATCY	4 cut(s)	1109, 1642, 1705, 2635
BstYI	RGATCY	4 cut(s)	1109, 1642, 1705, 2635
BsuRI	GGCC	5 cut(s)	363, 387, 919, 1244, 1822
BtgI	CCRYGG	1 cut(s)	2610
BtgZI	GCGATG	1 cut(s)	2501
BtsCI	GGATG	7 cut(s)	644, 767, 1111, 1232, 2137, 2307, 2350
BtsI	GCAGTG	3 cut(s)	636, 1804, 2586
BtsIMutI	CAGTG	9 cut(s)	543, 636, 1417, 1804, 2286, 2339, 2497, 2523, 2586
Cac8I	GCNNGC	7 cut(s)	484, 991, 1573, 1685, 1824, 1990, 2394
CaiI	CAGNNNCTG	1 cut(s)	2132
CciI	TCATGA	1 cut(s)	1660
Cfr13I	GGNCC	2 cut(s)	1820, 2162
Cfr42I	CCGCGG	1 cut(s)	2613
CseI	GACGC	2 cut(s)	190, 238
Csp6I	GTAC	7 cut(s)	316, 1284, 1339, 1778, 2272, 2626, 2650
CviQI	GTAC	7 cut(s)	316, 1284, 1339, 1778, 2272, 2626, 2650
DdeI	CTNAG	7 cut(s)	55, 343, 535, 948, 1907, 2350, 2526
DraIII	CACNNNGTG	1 cut(s)	2322
Eam1104I	CTCTTC	6 cut(s)	304, 412, 878, 1041, 1626, 1783
EarI	CTCTTC	6 cut(s)	304, 412, 878, 1041, 1626, 1783
Eco130I	CCWWGG	5 cut(s)	469, 648, 1767, 1993, 2141
Eco147I	AGGCCT	2 cut(s)	387, 919
Eco31I	GGTCTC	1 cut(s)	120
Eco32I	GATATC	3 cut(s)	1869, 2202, 2497
Eco47I	GGWCC	1 cut(s)	2162
Eco57I	CTGAAG	1 cut(s)	1844
Eco88I	CYCGRG	2 cut(s)	1100, 1289
EcoO109I	RGGNCCY	1 cut(s)	1820
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	4 cut(s)	75, 289, 445, 2427
EcoRV	GATATC	3 cut(s)	1869, 2202, 2497
EcoT14I	CCWWGG	5 cut(s)	469, 648, 1767, 1993, 2141
EcoT22I	ATGCAT	1 cut(s)	767
ErhI	CCWWGG	5 cut(s)	469, 648, 1767, 1993, 2141
FalI	AAGNNNNNCTT	2 cut(s)	944, 976
FauNDI	CATATG	1 cut(s)	799
Fnu4HI	GCNGC	5 cut(s)	310, 487, 1359, 2133, 2610
FokI	GGATG	7 cut(s)	631, 774, 1118, 1239, 2124, 2294, 2357
Fsp4HI	GCNGC	5 cut(s)	310, 487, 1359, 2133, 2610
FspBI	CTAG	7 cut(s)	20, 278, 990, 1022, 1628, 1748, 2048
GluI	GCNGC	5 cut(s)	310, 487, 1359, 2133, 2610
GsuI	CTGGAG	3 cut(s)	59, 774, 1834
HaeIII	GGCC	5 cut(s)	363, 387, 919, 1244, 1822
HapII	CCGG	4 cut(s)	929, 1204, 1434, 2378
HgaI	GACGC	2 cut(s)	190, 238
HincII	GTYRAC	1 cut(s)	205
HindII	GTYRAC	1 cut(s)	205
HindIII	AAGCTT	1 cut(s)	1058
HinfI	GANTC	6 cut(s)	404, 997, 1159, 1883, 2101, 2530
HpaII	CCGG	4 cut(s)	929, 1204, 1434, 2378
HphI	GGTGA	4 cut(s)	536, 749, 1670, 2653
Hpy166II	GTNNAC	5 cut(s)	205, 958, 1126, 1469, 2584
Hpy188III	TCNNGA	7 cut(s)	722, 1331, 1559, 1661, 1880, 2056, 2153
Hpy8I	GTNNAC	5 cut(s)	205, 958, 1126, 1469, 2584
Hpy99I	CGWCG	1 cut(s)	2538
HpyAV	CCTTC	8 cut(s)	52, 140, 151, 752, 946, 1502, 1680, 1868
HpyCH4III	ACNGT	4 cut(s)	1283, 1421, 1699, 2492
HpyCH4IV	ACGT	2 cut(s)	935, 1838
HpyF3I	CTNAG	7 cut(s)	55, 343, 535, 948, 1907, 2350, 2526
HpySE526I	ACGT	2 cut(s)	935, 1838
KpnI	GGTACC	1 cut(s)	1287
KspI	CCGCGG	1 cut(s)	2613
LmnI	GCTCC	4 cut(s)	299, 596, 871, 2176
Lsp1109I	GCAGC	3 cut(s)	473, 1345, 2119
LweI	GCATC	6 cut(s)	172, 526, 752, 774, 786, 1217
MaeI	CTAG	7 cut(s)	20, 278, 990, 1022, 1628, 1748, 2048
MaeII	ACGT	2 cut(s)	935, 1838
MaeIII	GTNAC	3 cut(s)	3, 524, 671
MflI	RGATCY	4 cut(s)	1109, 1642, 1705, 2635
MhlI	GDGCHC	1 cut(s)	1128
MlyI	GAGTC	2 cut(s)	398, 991
MmeI	TCCRAC	2 cut(s)	600, 618
Mph1103I	ATGCAT	1 cut(s)	767
MroXI	GAANNNNTTC	1 cut(s)	2619
MseI	TTAA	8 cut(s)	48, 155, 225, 845, 924, 2090, 2249, 2666
MslI	CAYNNNNRTG	6 cut(s)	522, 1121, 1894, 2057, 2298, 2490
MspA1I	CMGCKG	1 cut(s)	2612
MspCI	CTTAAG	1 cut(s)	2665
MspI	CCGG	4 cut(s)	929, 1204, 1434, 2378
MspR9I	CCNGG	6 cut(s)	77, 291, 447, 930, 2379, 2429
Mva1269I	GAATGC	1 cut(s)	1907
MvaI	CCWGG	4 cut(s)	77, 291, 447, 2429
MvnI	CGCG	4 cut(s)	249, 1516, 1683, 2612
NciI	CCSGG	2 cut(s)	930, 2379
NdeI	CATATG	1 cut(s)	799
NheI	GCTAGC	1 cut(s)	989
NlaIV	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1644, 2367
NmeAIII	GCCGAG	2 cut(s)	979, 2671
NmuCI	GTSAC	1 cut(s)	524
NsiI	ATGCAT	1 cut(s)	767
NspI	RCATGY	1 cut(s)	1325
NspV	TTCGAA	1 cut(s)	1844
PaeR7I	CTCGAG	1 cut(s)	1289
PagI	TCATGA	1 cut(s)	1660
PceI	AGGCCT	2 cut(s)	387, 919
PciI	ACATGT	1 cut(s)	1321
PcsI	WCGNNNNNNNCGW	1 cut(s)	1287
PctI	GAATGC	1 cut(s)	1907
PdmI	GAANNNNTTC	1 cut(s)	2619
PfeI	GAWTC	4 cut(s)	1159, 1883, 2101, 2530
PflFI	GACNNNGTC	1 cut(s)	377
PfoI	TCCNGGA	1 cut(s)	75
PkrI	GCNGC	5 cut(s)	311, 488, 1360, 2134, 2611
PleI	GAGTC	2 cut(s)	398, 991
PpsI	GAGTC	2 cut(s)	398, 991
PscI	ACATGT	1 cut(s)	1321
PshBI	ATTAAT	1 cut(s)	2249
Psp1406I	AACGTT	2 cut(s)	935, 1838
Psp6I	CCWGG	4 cut(s)	75, 289, 445, 2427
PspGI	CCWGG	4 cut(s)	75, 289, 445, 2427
PspN4I	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1644, 2367
PspPI	GGNCC	2 cut(s)	1820, 2162
PspXI	VCTCGAGB	1 cut(s)	1289
PstNI	CAGNNNCTG	1 cut(s)	2132
PsuI	RGATCY	4 cut(s)	1109, 1642, 1705, 2635
PsyI	GACNNNGTC	1 cut(s)	377
RsaI	GTAC	7 cut(s)	317, 1285, 1340, 1779, 2273, 2627, 2651
RsaNI	GTAC	7 cut(s)	316, 1284, 1339, 1778, 2272, 2626, 2650
RseI	CAYNNNNRTG	6 cut(s)	522, 1121, 1894, 2057, 2298, 2490
SacII	CCGCGG	1 cut(s)	2613
SaqAI	TTAA	8 cut(s)	48, 155, 225, 845, 924, 2090, 2249, 2666
SatI	GCNGC	5 cut(s)	310, 487, 1359, 2133, 2610
Sau96I	GGNCC	2 cut(s)	1820, 2162
ScaI	AGTACT	1 cut(s)	2627
SchI	GAGTC	2 cut(s)	398, 991
ScrFI	CCNGG	6 cut(s)	77, 291, 447, 930, 2379, 2429
SduI	GDGCHC	1 cut(s)	1128
SfaNI	GCATC	6 cut(s)	172, 526, 752, 774, 786, 1217
Sfr274I	CTCGAG	1 cut(s)	1289
Sfr303I	CCGCGG	1 cut(s)	2613
SfuI	TTCGAA	1 cut(s)	1844
SgrBI	CCGCGG	1 cut(s)	2613
SinI	GGWCC	1 cut(s)	2162
SlaI	CTCGAG	1 cut(s)	1289
SmiMI	CAYNNNNRTG	6 cut(s)	522, 1121, 1894, 2057, 2298, 2490
SmlI	CTYRAG	6 cut(s)	568, 1289, 1427, 1559, 1829, 2665
SmoI	CTYRAG	6 cut(s)	568, 1289, 1427, 1559, 1829, 2665
SseBI	AGGCCT	2 cut(s)	387, 919
SsiI	CCGC	6 cut(s)	247, 310, 1681, 2610, 2612, 2671
SspI	AATATT	2 cut(s)	1086, 1970
SspMI	CTAG	7 cut(s)	20, 278, 990, 1022, 1628, 1748, 2048
StuI	AGGCCT	2 cut(s)	387, 919
StyD4I	CCNGG	6 cut(s)	75, 289, 445, 928, 2377, 2427
StyI	CCWWGG	5 cut(s)	469, 648, 1767, 1993, 2141
TaaI	ACNGT	4 cut(s)	1283, 1421, 1699, 2492
TaiI	ACGT	2 cut(s)	938, 1841
TaqI	TCGA	5 cut(s)	255, 1290, 1496, 1844, 2630
TatI	WGTACW	5 cut(s)	315, 1777, 2271, 2625, 2649
TauI	GCSGC	2 cut(s)	312, 2612
TfiI	GAWTC	4 cut(s)	1159, 1883, 2101, 2530
Tru1I	TTAA	8 cut(s)	48, 155, 225, 845, 924, 2090, 2249, 2666
Tru9I	TTAA	8 cut(s)	48, 155, 225, 845, 924, 2090, 2249, 2666
TscAI	CASTG	9 cut(s)	543, 636, 1424, 1804, 2286, 2346, 2497, 2530, 2586
TseFI	GTSAC	1 cut(s)	524
TseI	GCWGC	3 cut(s)	486, 1358, 2132
Tsp45I	GTSAC	1 cut(s)	524
TspRI	CASTG	9 cut(s)	543, 636, 1424, 1804, 2286, 2346, 2497, 2530, 2586
Tth111I	GACNNNGTC	1 cut(s)	377
Vha464I	CTTAAG	1 cut(s)	2665
VneI	GTGCAC	1 cut(s)	1124
VpaK11BI	GGWCC	1 cut(s)	2162
VspI	ATTAAT	1 cut(s)	2249
XapI	RAATTY	6 cut(s)	103, 257, 548, 1398, 1911, 2178
XceI	RCATGY	1 cut(s)	1325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	119
XhoI	CTCGAG	1 cut(s)	1289
XmnI	GAANNNNTTC	1 cut(s)	2619
XspI	CTAG	7 cut(s)	20, 278, 990, 1022, 1628, 1748, 2048
ZrmI	AGTACT	1 cut(s)	2627
Zsp2I	ATGCAT	1 cut(s)	767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.