Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004908

Physical Location & Seq

Genomic Coordinates Reverse (-)

40285100 .. 40293475

Gene Structure 8376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0288300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGGTTTCAAATTCGATTCTTTGCTCCTCTCCCTCTATGATTCTCCGTCTTTTCCTTCTTTTTATATCCTTATTCGGACACTGTTATTCCTACGACGAGCTGGGTCCTTCCACAAACAGCTTCACAGTCTCCAGCTTCAGCTACCCACCTACACTGCTCAAGAACTCTAATTTTCGCTATATCAGAGTTGAACTGCCACCATGGTTCTCTTCAATGTCTATAGCAATGAACTCGAACGTAGACCTAGGTCATGTAAACATAGAAAAGGTTCCTAAAATTACAATGCCGTTGATTTGCTTCAGAGAGGGTAGCCCTCCACTGCCCGATGTCAATACCTCTCTAACAGATTCCGGCCATCAAGTTTTAGTTCCCTTTTACGATGGTTCACTTAAGGCAACACAAGCTCTTCAGAGTGCAGAGCAATGCTATCTTATGCAAAAGAATTTCACAGTGAAGTTGACAAATGAGCAGATTTCTCCAGGAGTTTGGTATTTGGGTCTTTTCAATGGTATTGGACCTACAAGGACGCAATCAAAAATGATTAACCGTGGATCTCAATATACCTTCAGTGCCAATATCACAGTTGAAGGATGTACAACTGAAACCATGTGGGGCCAGTATTGCAACCAGACAATTTATCCTCTTTCTTGTTCTCTATCTGGTAGCTACAATCCTGCAGAAAATTCTTCAGAGGCTAATTTGTACAACAGTACAATGGGTTATGGTATTTCTTGCAAAAATGATTTTGAAACTTCTTGTCAAGGAGATGGGGAACCAAAGTTTTACTCTTTGGATGTGGTGGGAATATCACAGGAGTTAAACATTGTGGCAACGGATGTTTGGTTAAATGAAACATTATCAAATAACACTAAGAATGGTAGTGATATTAATTTAATGTGTTTTGCACGTCACGGCGCAATACCTTCAGAATCTCTGCATGATTATTCCAGTAATATAAACAATAATCCTTTGGTCATTAACTTTCCAAAGGTTGGCCGCTGGTATATTGCTGTTTTACCTGTCAACCTCTCAAAAGTGCTTGGAGGGAGTTTAGATACTTCCATAAAAGTTTGCTACTCCATGGAATCAAAACTGCTTGAATGTCCACTGGGGAAGGCTGGAGCAAATTGTACATGGGAAACATACACCCTTCAGACGGTTCTGAGGAAAGGTTCAGGCTTCTTTGAGTCCTACTATTTGCCTGACAGTGGAAAAGTATCTTCTGACTCAGCCAATTTTCCTCTTGATTCACTTGTAACCAACACATCGATTGGCGAAAAACCAGATAATTCCTGGACATATTTTGTTCTCGACATTCCTCGTGGTGCAGCTGGAGGAAATATGCACATTCGATTAACATCAGATACGAAGATTAATTACGAAGTATATACTAGATTTGGTGGATTACCATCTCTTACCAGCTGGGACTACTATTATGCTAACAGGACAAGCAATAGTGTTGGCTCCATGTTTTTCAACTTATATAACTCTAGTGAAGACAAGGTTGATTTTTACGTGTTGTACGTCAGAGAAGGAACTTGGGGTTTTGGACTAAAGCATCTAGACGCCACCAGTATTGCTTCCAAAGTTCAAACTACCATGTCTCTTTCCCTTGAAAGATGCCCTAGAAGATGCTCCTCACATGGAAAATGCGAAAATGTCTTAGATGCTAGTGGATTAACATCGTACAGCTACTGCTCATGTGACCGGGACCATGGAGGCTTTGATTGTAGTATTGAAATTGTATCTCATCATGGGCACATATGGCAATCAATTTTTCTTATCGTGTCAAATGCTGCAGCAGCACTTCCTGCCTTCTATTCCCTTCGACAGAAGGCATGGTCAGAATGGGTGATATATACATCTAGTGGAATTGCAAGTGGAATTTATCATGCCTGTGATGTGGGAACATGGTGTCCTCTGGATTTTAATACTTTACAGTTCATGGACTTCTGGCTGTCTTTCATGGCCGTAGTGAGCACATTTGTGTACCTAGCTACAATGGATGAAGCTCATAAGAGAGCAGTCCTCACAGCTGTAGCAATTTTTACTGCCCTTATGGCAGTTACTAAGGCCACAAGGACGTCCAATATTGCGATTGTAATGTCAATTGGCATTTCGGCTCTTCTTCTTGGATGGCTGATAGAATTAACAACCAAGTATAGGTCATTTTCCTTTCCGGTTGGATTCTCCTTAAATATAATTGAGAGGTTCCAAGGTGTTAGAGGATGGCTCAAAGATCTTATTAAGACAGTTTTCAAAAGATTTCGCTGGGGCTTTGTACTCGCAGGTTCTACTGCATTAGCCATGGCAGCAATCAGCTGGACACTGGAGAGCACTGAAACCTACTGGATTTGGCACAGCCTTTGGCATGTCACCATATATACGTCTTCCTTCTTCTTCCTTTGCTCAAAAGCAAGTACTGAGAGTACCGAAAATACTGTAGATACTGGTCTTGTAGATACTGAGAGTCAGAGACCCCCAAATGGAGCCTATGAGTTGACTAGGCAGGATTCATTTACAAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase_Tyr

Protein Analysis

843

Amino Acids

93.82

Weight (kDa)

5.93

Isoelectric Point (pI)

40.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3522	PF12036	587 - 792	9.9e-39	Protein of unknown function (DUF3522)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01050 AT1G01050 AT2G46860 AT4G01480 AT4G01480
fragaria_vesca	FvH4_7g17871 FvH4_7g17880 FvH4_7g17880 FvH4_7g17880
malus_domestica	MD01G1091200.v1.1 MD01G1091400.v1.1 MD07G1161500.v1.1
prunus_persica	Prupe.2G200700_v2.0.a1 Prupe.2G200700_v2.0.a1 Prupe.2G200800_v2.0.a1 Prupe.2G200800_v2.0.a1
pyrus_communis	pycom01g11550
rosa_chinensis	RchiOBHm_Chr1g0361351
rosa_laevigata	RLG00000027723 RLG00000027724
rosa_multiflora	Rmu_sc0002119.1_g000027
rosa_roxburghii	Rroxscaffold_4G00295030
rosa_rugosa	Rorug01G0288300 Rorug01G0288400 Rorug01G0288500 Rorug01G0288800
rosa_samantha	Rh1AG299600 Rh1BG263400
rosa_wichuraiana	Rw1G026520 Rw1G026530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2087
Acc36I	ACCTGC	1 cut(s)	2279
AccB7I	CCANNNNNTGG	1 cut(s)	992
AccI	GTMKAC	1 cut(s)	240
AciI	CCGC	1 cut(s)	997
AclWI	GGATC	1 cut(s)	559
AcoI	YGGCCR	3 cut(s)	352, 994, 1968
AcsI	RAATTY	4 cut(s)	10, 442, 682, 1884
AcuI	CTGAAG	7 cut(s)	121, 283, 392, 550, 672, 909, 1136
AcyI	GRCGYC	2 cut(s)	1566, 2084
AfiI	CCNNNNNNNGG	5 cut(s)	992, 1156, 1208, 2163, 2486
AflII	CTTAAG	1 cut(s)	389
AflIII	ACRYGT	1 cut(s)	1515
AjiI	CACGTC	1 cut(s)	908
AjnI	CCWGG	2 cut(s)	478, 1292
AleI	CACNNNNGTG	1 cut(s)	1985
AloI	GAACNNNNNNTCC	2 cut(s)	1900, 1932
Alw21I	GWGCWC	2 cut(s)	1982, 2339
Alw26I	GTCTC	3 cut(s)	133, 1608, 2470
AlwI	GGATC	1 cut(s)	559
AlwNI	CAGNNNCTG	1 cut(s)	1695
AoxI	GGCC	5 cut(s)	352, 613, 994, 1968, 2073
ApeKI	GCWGC	5 cut(s)	1328, 1796, 1799, 1802, 2312
ApoI	RAATTY	4 cut(s)	10, 442, 682, 1884
AseI	ATTAAT	2 cut(s)	888, 1374
Asp700I	GAANNNNTTC	1 cut(s)	267
AspA2I	CCTAGG	1 cut(s)	244
AspLEI	GCGC	1 cut(s)	917
AspS9I	GGNCC	4 cut(s)	104, 515, 613, 1711
AsuC2I	CCSGG	1 cut(s)	1709
AsuHPI	GGTGA	2 cut(s)	1864, 2368
AvaII	GGWCC	3 cut(s)	104, 515, 1711
AvrII	CCTAGG	1 cut(s)	244
BaeGI	GKGCMC	1 cut(s)	1761
BarI	GAAGNNNNNNTAC	2 cut(s)	1361, 1393
BauI	CACGAG	1 cut(s)	1320
BbsI	GAAGAC	2 cut(s)	1503, 2382
Bbv12I	GWGCWC	2 cut(s)	1982, 2339
BbvI	GCAGC	5 cut(s)	1340, 1783, 1811, 1814, 2324
BccI	CCATC	6 cut(s)	363, 374, 761, 1417, 2130, 2223
BceAI	ACGGC	3 cut(s)	271, 928, 1955
BcgI	CGANNNNNNTGC	2 cut(s)	213, 247
BciT130I	CCWGG	2 cut(s)	480, 1294
BcnI	CCSGG	1 cut(s)	1709
BcoDI	GTCTC	3 cut(s)	133, 1608, 2470
BfaI	CTAG	9 cut(s)	245, 1392, 1491, 1562, 1626, 1671, 1866, 1994, 2505
BfmI	CTRYAG	5 cut(s)	219, 675, 1797, 2037, 2442
BfrI	CTTAAG	1 cut(s)	389
BfuAI	ACCTGC	1 cut(s)	2279
BglI	GCCNNNNNGGC	1 cut(s)	2060
BglII	AGATCT	1 cut(s)	2239
BisI	GCNGC	6 cut(s)	997, 1329, 1797, 1800, 1803, 2313
BlnI	CCTAGG	1 cut(s)	244
BlsI	GCNGC	6 cut(s)	998, 1330, 1798, 1801, 1804, 2314
BmcAI	AGTACT	1 cut(s)	2422
Bme1390I	CCNGG	3 cut(s)	480, 1294, 1709
Bme18I	GGWCC	3 cut(s)	104, 515, 1711
BmgBI	CACGTC	1 cut(s)	908
BmgT120I	GGNCC	4 cut(s)	104, 515, 613, 1711
BmiI	GGNNCC	8 cut(s)	105, 270, 614, 774, 1465, 1712, 2213, 2491
BmrFI	CCNGG	3 cut(s)	480, 1294, 1709
BmrI	ACTGGG	1 cut(s)	1118
BmsI	GCATC	4 cut(s)	1567, 1610, 1622, 1657
BmuI	ACTGGG	1 cut(s)	1118
BoxI	GACNNNNGTC	1 cut(s)	246
BpiI	GAAGAC	2 cut(s)	1503, 2382
BplI	GAGNNNNNCTC	4 cut(s)	2013, 2045, 2217, 2249
BpmI	CTGGAG	5 cut(s)	115, 462, 1140, 1353, 2351
BpuEI	CTTGAG	1 cut(s)	143
BpuMI	CCSGG	1 cut(s)	1709
Bsa29I	ATCGAT	1 cut(s)	1268
BsaAI	YACGTR	1 cut(s)	1516
BsaBI	GATNNNNATC	3 cut(s)	1357, 1408, 1681
BsaHI	GRCGYC	2 cut(s)	1566, 2084
BsaI	GGTCTC	1 cut(s)	2470
BsaJI	CCNNGG	7 cut(s)	200, 244, 547, 1080, 1714, 2215, 2307
BsaWI	WCCGGW	1 cut(s)	2179
Bsc4I	CCNNNNNNNGG	5 cut(s)	992, 1156, 1208, 2163, 2486
Bse1I	ACTGG	7 cut(s)	616, 948, 1113, 1572, 2334, 2354, 2455
Bse3DI	GCAATG	2 cut(s)	231, 428
Bse8I	GATNNNNATC	3 cut(s)	1357, 1408, 1681
BseBI	CCWGG	2 cut(s)	480, 1294
BseCI	ATCGAT	1 cut(s)	1268
BseDI	CCNNGG	7 cut(s)	200, 244, 547, 1080, 1714, 2215, 2307
BseGI	GGATG	6 cut(s)	596, 799, 841, 2011, 2141, 2234
BseJI	GATNNNNATC	3 cut(s)	1357, 1408, 1681
BseLI	CCNNNNNNNGG	5 cut(s)	992, 1156, 1208, 2163, 2486
BseMI	GCAATG	2 cut(s)	231, 428
BseMII	CTCAG	4 cut(s)	1154, 1242, 2415, 2457
BseNI	ACTGG	7 cut(s)	616, 948, 1113, 1572, 2334, 2354, 2455
BseRI	GAGGAG	2 cut(s)	16, 1627
BseSI	GKGCMC	1 cut(s)	1761
BseXI	GCAGC	5 cut(s)	1340, 1783, 1811, 1814, 2324
BseYI	CCCAGC	3 cut(s)	100, 1422, 2271
BsgI	GTGCAG	2 cut(s)	435, 1347
BshFI	GGCC	5 cut(s)	354, 615, 996, 1970, 2075
BshVI	ATCGAT	1 cut(s)	1268
BsiHKAI	GWGCWC	2 cut(s)	1982, 2339
BsiSI	CCGG	3 cut(s)	351, 1708, 2180
BslFI	GGGAC	2 cut(s)	1439, 1724
BslI	CCNNNNNNNGG	5 cut(s)	992, 1156, 1208, 2163, 2486
BsmAI	GTCTC	3 cut(s)	133, 1608, 2470
BsmFI	GGGAC	2 cut(s)	1439, 1724
BsnI	GGCC	5 cut(s)	354, 615, 996, 1970, 2075
Bso31I	GGTCTC	1 cut(s)	2470
Bsp1286I	GDGCHC	3 cut(s)	1761, 1982, 2339
Bsp1407I	TGTACA	3 cut(s)	593, 702, 1130
Bsp143I	GATC	2 cut(s)	551, 2239
Bsp19I	CCATGG	4 cut(s)	200, 1080, 1714, 2307
BspACI	CCGC	1 cut(s)	997
BspANI	GGCC	5 cut(s)	354, 615, 996, 1970, 2075
BspCNI	CTCAG	4 cut(s)	1155, 1241, 2416, 2458
BspDI	ATCGAT	1 cut(s)	1268
BspLI	GGNNCC	8 cut(s)	105, 270, 614, 774, 1465, 1712, 2213, 2491
BspMAI	CTGCAG	2 cut(s)	679, 1801
BspMI	ACCTGC	1 cut(s)	2279
BspPI	GGATC	1 cut(s)	559
BspQI	GCTCTTC	2 cut(s)	411, 2130
BspTI	CTTAAG	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	2470
BsrDI	GCAATG	2 cut(s)	231, 428
BsrGI	TGTACA	3 cut(s)	593, 702, 1130
BsrI	ACTGG	7 cut(s)	616, 948, 1113, 1572, 2334, 2354, 2455
BssECI	CCNNGG	7 cut(s)	200, 244, 547, 1080, 1714, 2215, 2307
BssMI	GATC	2 cut(s)	551, 2239
BssNI	GRCGYC	2 cut(s)	1566, 2084
BssSI	CACGAG	1 cut(s)	1320
BssT1I	CCWWGG	6 cut(s)	200, 244, 1080, 1714, 2215, 2307
Bst2BI	CACGAG	1 cut(s)	1320
Bst2UI	CCWGG	2 cut(s)	480, 1294
Bst6I	CTCTTC	3 cut(s)	214, 411, 2130
BstACI	GRCGYC	2 cut(s)	1566, 2084
BstAFI	CTTAAG	1 cut(s)	389
BstAPI	GCANNNNNTGC	1 cut(s)	1811
BstAUI	TGTACA	3 cut(s)	593, 702, 1130
BstBAI	YACGTR	1 cut(s)	1516
BstDEI	CTNAG	7 cut(s)	870, 1163, 1228, 1663, 2070, 2424, 2466
BstDSI	CCRYGG	5 cut(s)	200, 547, 1080, 1714, 2307
BstF5I	GGATG	6 cut(s)	596, 799, 841, 2011, 2141, 2234
BstHHI	GCGC	1 cut(s)	917
BstKTI	GATC	2 cut(s)	554, 2242
BstMAI	GTCTC	3 cut(s)	133, 1608, 2470
BstMBI	GATC	2 cut(s)	551, 2239
BstMWI	GCNNNNNNNGC	7 cut(s)	401, 621, 1765, 1802, 1811, 2060, 2312
BstNI	CCWGG	2 cut(s)	480, 1294
BstNSI	RCATGY	1 cut(s)	2375
BstPAI	GACNNNNGTC	1 cut(s)	246
BstSCI	CCNGG	3 cut(s)	478, 1292, 1707
BstSFI	CTRYAG	5 cut(s)	219, 675, 1797, 2037, 2442
BstSLI	GKGCMC	1 cut(s)	1761
BstV1I	GCAGC	5 cut(s)	1340, 1783, 1811, 1814, 2324
BstV2I	GAAGAC	2 cut(s)	1503, 2382
BstX2I	RGATCY	2 cut(s)	551, 2239
BstXI	CCANNNNNNTGG	1 cut(s)	486
BstYI	RGATCY	2 cut(s)	551, 2239
Bsu15I	ATCGAT	1 cut(s)	1268
BsuRI	GGCC	5 cut(s)	354, 615, 996, 1970, 2075
BsuTUI	ATCGAT	1 cut(s)	1268
BtgI	CCRYGG	5 cut(s)	200, 547, 1080, 1714, 2307
BtrI	CACGTC	1 cut(s)	908
BtsCI	GGATG	6 cut(s)	596, 799, 841, 2011, 2141, 2234
BtsI	GCAGTG	2 cut(s)	152, 317
BtsIMutI	CAGTG	9 cut(s)	79, 152, 317, 456, 574, 1106, 1213, 2327, 2337
BveI	ACCTGC	1 cut(s)	2279
CaiI	CAGNNNCTG	1 cut(s)	1695
CfoI	GCGC	1 cut(s)	917
Cfr13I	GGNCC	4 cut(s)	104, 515, 613, 1711
ClaI	ATCGAT	1 cut(s)	1268
CseI	GACGC	2 cut(s)	535, 1574
CspCI	CAANNNNNGTGG	2 cut(s)	1558, 1593
DdeI	CTNAG	7 cut(s)	870, 1163, 1228, 1663, 2070, 2424, 2466
DpnI	GATC	2 cut(s)	553, 2241
DpnII	GATC	2 cut(s)	551, 2239
EaeI	YGGCCR	3 cut(s)	352, 994, 1968
Eam1104I	CTCTTC	3 cut(s)	214, 411, 2130
EarI	CTCTTC	3 cut(s)	214, 411, 2130
Eco130I	CCWWGG	6 cut(s)	200, 244, 1080, 1714, 2215, 2307
Eco31I	GGTCTC	1 cut(s)	2470
Eco47I	GGWCC	3 cut(s)	104, 515, 1711
Eco57I	CTGAAG	7 cut(s)	121, 283, 392, 550, 672, 909, 1136
EcoO109I	RGGNCCY	1 cut(s)	104
EcoRII	CCWGG	2 cut(s)	478, 1292
EcoT14I	CCWWGG	6 cut(s)	200, 244, 1080, 1714, 2215, 2307
ErhI	CCWWGG	6 cut(s)	200, 244, 1080, 1714, 2215, 2307
FaqI	GGGAC	2 cut(s)	1439, 1724
FauNDI	CATATG	1 cut(s)	1763
FblI	GTMKAC	1 cut(s)	240
Fnu4HI	GCNGC	6 cut(s)	997, 1329, 1797, 1800, 1803, 2313
FokI	GGATG	6 cut(s)	603, 806, 848, 2018, 2148, 2241
Fsp4HI	GCNGC	6 cut(s)	997, 1329, 1797, 1800, 1803, 2313
FspBI	CTAG	9 cut(s)	245, 1392, 1491, 1562, 1626, 1671, 1866, 1994, 2505
GlaI	GCGC	1 cut(s)	916
GluI	GCNGC	6 cut(s)	997, 1329, 1797, 1800, 1803, 2313
GsaI	CCCAGC	3 cut(s)	104, 1426, 2275
GsuI	CTGGAG	5 cut(s)	115, 462, 1140, 1353, 2351
HaeIII	GGCC	5 cut(s)	354, 615, 996, 1970, 2075
HapII	CCGG	3 cut(s)	351, 1708, 2180
HgaI	GACGC	2 cut(s)	535, 1574
HhaI	GCGC	1 cut(s)	917
Hin1I	GRCGYC	2 cut(s)	1566, 2084
Hin6I	GCGC	1 cut(s)	915
HinP1I	GCGC	1 cut(s)	915
HincII	GTYRAC	3 cut(s)	459, 1024, 2502
HindII	GTYRAC	3 cut(s)	459, 1024, 2502
HpaII	CCGG	3 cut(s)	351, 1708, 2180
HphI	GGTGA	2 cut(s)	1864, 2368
Hpy166II	GTNNAC	8 cut(s)	241, 256, 386, 459, 1024, 1106, 1990, 2502
Hpy188III	TCNNGA	5 cut(s)	160, 1244, 1310, 1562, 1922
Hpy8I	GTNNAC	8 cut(s)	241, 256, 386, 459, 1024, 1106, 1990, 2502
Hpy99I	CGWCG	1 cut(s)	98
HpyCH4IV	ACGT	6 cut(s)	237, 907, 1515, 1524, 2084, 2387
HpyF10VI	GCNNNNNNNGC	7 cut(s)	401, 621, 1765, 1802, 1811, 2060, 2312
HpyF3I	CTNAG	7 cut(s)	870, 1163, 1228, 1663, 2070, 2424, 2466
HpySE526I	ACGT	6 cut(s)	237, 907, 1515, 1524, 2084, 2387
Hsp92I	GRCGYC	2 cut(s)	1566, 2084
HspAI	GCGC	1 cut(s)	915
Kzo9I	GATC	2 cut(s)	551, 2239
LguI	GCTCTTC	2 cut(s)	411, 2130
LmnI	GCTCC	5 cut(s)	29, 1121, 1469, 1640, 2489
Lsp1109I	GCAGC	5 cut(s)	1340, 1783, 1811, 1814, 2324
LweI	GCATC	4 cut(s)	1567, 1610, 1622, 1657
MaeI	CTAG	9 cut(s)	245, 1392, 1491, 1562, 1626, 1671, 1866, 1994, 2505
MaeII	ACGT	6 cut(s)	237, 907, 1515, 1524, 2084, 2387
MaeIII	GTNAC	5 cut(s)	908, 1255, 1703, 2065, 2374
MalI	GATC	2 cut(s)	553, 2241
MboI	GATC	2 cut(s)	551, 2239
MfeI	CAATTG	1 cut(s)	2109
MflI	RGATCY	2 cut(s)	551, 2239
MhlI	GDGCHC	3 cut(s)	1761, 1982, 2339
MlyI	GAGTC	3 cut(s)	1196, 1220, 2479
MmeI	TCCRAC	1 cut(s)	2164
MroXI	GAANNNNTTC	1 cut(s)	267
MslI	CAYNNNNRTG	2 cut(s)	1896, 1985
MspA1I	CMGCKG	5 cut(s)	999, 1331, 1422, 2036, 2322
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	3 cut(s)	351, 1708, 2180
MspR9I	CCNGG	3 cut(s)	480, 1294, 1709
MunI	CAATTG	1 cut(s)	2109
MvaI	CCWGG	2 cut(s)	480, 1294
MwoI	GCNNNNNNNGC	7 cut(s)	401, 621, 1765, 1802, 1811, 2060, 2312
NciI	CCSGG	1 cut(s)	1709
NcoI	CCATGG	4 cut(s)	200, 1080, 1714, 2307
NdeI	CATATG	1 cut(s)	1763
NdeII	GATC	2 cut(s)	551, 2239
NlaIV	GGNNCC	8 cut(s)	105, 270, 614, 774, 1465, 1712, 2213, 2491
NmuCI	GTSAC	3 cut(s)	908, 1703, 2374
NspI	RCATGY	1 cut(s)	2375
OliI	CACNNNNGTG	1 cut(s)	1985
PciSI	GCTCTTC	2 cut(s)	411, 2130
PcsI	WCGNNNNNNNCGW	1 cut(s)	1521
PdmI	GAANNNNTTC	1 cut(s)	267
PfeI	GAWTC	8 cut(s)	16, 40, 347, 929, 1085, 1247, 2187, 2513
PflMI	CCANNNNNTGG	1 cut(s)	992
PfoI	TCCNGGA	2 cut(s)	478, 1292
PkrI	GCNGC	6 cut(s)	998, 1330, 1798, 1801, 1804, 2314
PleI	GAGTC	3 cut(s)	1195, 1220, 2478
PpsI	GAGTC	3 cut(s)	1195, 1220, 2478
Ppu21I	YACGTR	1 cut(s)	1516
PpuMI	RGGWCCY	1 cut(s)	104
PshAI	GACNNNNGTC	1 cut(s)	246
PshBI	ATTAAT	2 cut(s)	888, 1374
Psp5II	RGGWCCY	1 cut(s)	104
Psp6I	CCWGG	2 cut(s)	478, 1292
PspFI	CCCAGC	3 cut(s)	100, 1422, 2271
PspGI	CCWGG	2 cut(s)	478, 1292
PspN4I	GGNNCC	8 cut(s)	105, 270, 614, 774, 1465, 1712, 2213, 2491
PspPI	GGNCC	4 cut(s)	104, 515, 613, 1711
PspPPI	RGGWCCY	1 cut(s)	104
PstI	CTGCAG	2 cut(s)	679, 1801
PstNI	CAGNNNCTG	1 cut(s)	1695
PsuI	RGATCY	2 cut(s)	551, 2239
PvuII	CAGCTG	4 cut(s)	1331, 1422, 2036, 2322
RseI	CAYNNNNRTG	2 cut(s)	1896, 1985
SapI	GCTCTTC	2 cut(s)	411, 2130
SatI	GCNGC	6 cut(s)	997, 1329, 1797, 1800, 1803, 2313
Sau3AI	GATC	2 cut(s)	551, 2239
Sau96I	GGNCC	4 cut(s)	104, 515, 613, 1711
ScaI	AGTACT	1 cut(s)	2422
SchI	GAGTC	3 cut(s)	1196, 1220, 2479
ScrFI	CCNGG	3 cut(s)	480, 1294, 1709
SduI	GDGCHC	3 cut(s)	1761, 1982, 2339
SfaNI	GCATC	4 cut(s)	1567, 1610, 1622, 1657
SfcI	CTRYAG	5 cut(s)	219, 675, 1797, 2037, 2442
SinI	GGWCC	3 cut(s)	104, 515, 1711
SmiMI	CAYNNNNRTG	2 cut(s)	1896, 1985
SmlI	CTYRAG	2 cut(s)	158, 389
SmoI	CTYRAG	2 cut(s)	158, 389
SsiI	CCGC	1 cut(s)	997
SspI	AATATT	1 cut(s)	2092
SspMI	CTAG	9 cut(s)	245, 1392, 1491, 1562, 1626, 1671, 1866, 1994, 2505
StyD4I	CCNGG	3 cut(s)	478, 1292, 1707
StyI	CCWWGG	6 cut(s)	200, 244, 1080, 1714, 2215, 2307
TaiI	ACGT	6 cut(s)	240, 910, 1518, 1527, 2087, 2390
TaqI	TCGA	6 cut(s)	14, 233, 1268, 1311, 1351, 1828
TatI	WGTACW	6 cut(s)	593, 702, 710, 1130, 2281, 2420
TauI	GCSGC	1 cut(s)	999
TfiI	GAWTC	8 cut(s)	16, 40, 347, 929, 1085, 1247, 2187, 2513
TscAI	CASTG	9 cut(s)	86, 159, 324, 456, 574, 1113, 1213, 2334, 2344
TseFI	GTSAC	3 cut(s)	908, 1703, 2374
TseI	GCWGC	5 cut(s)	1328, 1796, 1799, 1802, 2312
Tsp45I	GTSAC	3 cut(s)	908, 1703, 2374
TspDTI	ATGAA	6 cut(s)	242, 864, 1933, 1954, 2022, 2505
TspGWI	ACGGA	2 cut(s)	35, 848
TspRI	CASTG	9 cut(s)	86, 159, 324, 456, 574, 1113, 1213, 2334, 2344
Van91I	CCANNNNNTGG	1 cut(s)	992
Vha464I	CTTAAG	1 cut(s)	389
VpaK11BI	GGWCC	3 cut(s)	104, 515, 1711
VspI	ATTAAT	2 cut(s)	888, 1374
XapI	RAATTY	4 cut(s)	10, 442, 682, 1884
XbaI	TCTAGA	1 cut(s)	1561
XceI	RCATGY	1 cut(s)	2375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1290
XmaJI	CCTAGG	1 cut(s)	244
XmiI	GTMKAC	1 cut(s)	240
XmnI	GAANNNNTTC	1 cut(s)	267
XspI	CTAG	9 cut(s)	245, 1392, 1491, 1562, 1626, 1671, 1866, 1994, 2505
ZraI	GACGTC	1 cut(s)	2085
ZrmI	AGTACT	1 cut(s)	2422

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.