Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0016604

Physical Location & Seq

Genomic Coordinates Forward (+)

39648619 .. 39660498

Gene Structure 11880 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG263300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGTTACCTCTATCATCTCTAGCTTCCTTTCTTCTCCTTACCTTCTTTAAGTTCTTAGCCATTTCTCACTCTCTCCAGGAACAACACCAGCTACCACGACCAAATTTGTGCCATGAAAAATGTGGAGACCTTCAAATCTCCTTCCCATTTCACTTGAACAAATCCTGTTCTTCACTCTCTGATGGTTTCCATCTCTCTTGCGTCAACTCAACTAACCTTTTCCTTAACATTGGTTCCGAAAGCTACCGTGTCCTCGAATTCTTCTCTGATGGTTTGCTAGTGGATTTTCCAGGCTCCTCTTCCTACTGCCGCCAGTACAATGACTTGAACTCCTTTGATTTCTTAGGAAATGACCACTTTGGCCTCTCTGCTGACAATGTCATAGGCCTCTATGATTGTGAGGACTCTTCTCTGTGCAAAACAGAATGTGAAACCATTGACTTGCCTGGCTGTGATGGCAATGAAAGCCAAGGCTCTCCTGCTTGCTGCTACCCTCTTTCTGATTACAGCCTGTGGCATCTTGGTGACAAGTTCTCAGTGTTTTCCAAATTTGGGTGCAGGGGCTTCTCAAGTTGGGTTGTTCAGAGAGGCTCCAACTTGGGAAAGAGAGGGGTAAAGTTGGAATGGGCAGTGCCAAGAAACTCATCCAAGGGGGTTTGTGCTACCAATGGTTACATTATCAATGCCACATCAATTCAAGCAGGGGTTAGGTGTGCTTGTCAAGATGGGTTCATTGGTGATGGATTTGCAACTGGAGAAGGATGCATCATGTCCTGCATCAAAGAGAGGAGGGAAGCATATGGCGCAGATTGCTTCAAAAAAAGGCATGGTAGCAAGAAACTTTTAATTATAGTAGGAGTTCTTGCTCCCCTCTTCATCATAGCCTCATTGATTGCACTTCTGTATCTACTCAAAAGGCCTGTTAAACCGGGAACGTTTGATCCAGCTCAGAAGGTTCACTTCCACAGCACCATATCATTCCGAAAAGCTAGCAGGACTCGGCTATTCACTTACCATGAGCTAGAGGAAGCTACCAAAGCATTTGAAGAGGATCAGAAGCTTGTAAGTGGAAATAATGGCACAATATTTTCTGGGGTTCTCGGGGATGGATCCCACATTGCTGTGCACAAGATAGATTGTGAGAATGAAAAAGACTTGATTCAAGTCCTATCACAAATTGAGGCTTTGTCTGCTATCCTACACCGGAATATAACCCGATTTCTTGGATGCTGTATTGACTTGGCCTACACTCCACTACTGGTGTATGAATATCCAGCAAACGGTACCCTCGAGGATCATTTACACCAAACAGGAGGACAACATGTTGCTCTTGATTGGTACAAGAGGTTGAACATTGCTGCTGAAACAGCAAGTGTTCTTGCCTTTTTGCATAAACTCTGTGGTTTTGGACTACTGGTTTCGAGTCATGAAGAAGGCTCTCGTTTTCAAAGAACAGATGTTTATGCTTTAGGTGTGGTGCTTCTTGAGATGATTGCAAGCTCAAACTGCTTGGACTTGCAAATAGCCCTGCAAAAGATTAGAGGTGGGAAGCTAGAAGAGATTGTGGATCCACTTCTTTACTATCATGAACAACCTTCCTATCGCCGCGAGCAAATAGAGACAGTTGCAGACCTTGCAATGAGGTGTTTGTTGTTTGGTGGAGATGGAAAGCTAGGAATGTATGATGTAGCCAAGGAATTAGTACATATCAGAAGAGAGAGCAGTGATGGGGGTAGCAAGAGAGGGCCTGCACTTGAGGAAACGTTTTCAAACTCCAGCCTCCTTCAGATGATATCAATGTCTCCTGATTCAGCATCTCTAGCCATCAAGATGACTGAAGAAAAAAAACCAACTCCGAAATTAAATGAGAGGATTCTTTCATCTTTGTCAAGGAAATCAGTTGCTGCACATCCTTGGCATGATCTTGAAATTGGACCATCAGCTCCCCAAATTTTCAATGTTGTTGTTGAGATATCACAGGGAAGCAAAGTCAAATATGAACTTGACAAGAAAACAGGATTAATTAAGGTTGATCGGATTTTGTACTCGTCAGTGGTCTATCCTCATAACTATGGTTTCATCCCTCGCACCTTGTGTGAAGACAATGATCCACTGGATGTCTTAGTTCTCATGCAGGAACCTGTTATTCCGGGTGCATTTCTGCGTGCCAAAGCCATTGGACTAATGCCCATGATTGACCAGGGAGAGAAAGATGATAAGATCATTGCAGTATGTGCTGATGATCCAGCCTATAATCATTACAATGACATCGGAGAGCTTCCTCCTCATCGCCTCACTGAGATTCGTCGCTTCTTTGAAGACTACAAGAAGAATGAACACAAAGAGGTTGCAGTGGACGAGTTTTTGCCTTGCTCAACTGCCGCGGAAGCTATTCAGTACTCGATGGATCTTTATGCCGAGTACATAATGCTCACCTTAAGGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase_Tyr

Protein Analysis

815

Amino Acids

90.73

Weight (kDa)

5.86

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	37 - 87	4.7e-10	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	348 - 465	2.3e-07	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	351 - 465	1.1e-10	Protein tyrosine and serine/threonine kinase
Pyrophosphatase	PF00719	654 - 805	1.9e-56	Inorganic pyrophosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46850
fragaria_vesca	FvH4_7g17870
malus_domestica	MD01G1091100.v1.1 MD07G1161300.v1.1
prunus_persica	Prupe.2G200600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0361321
rosa_laevigata	RLG00000027725
rosa_roxburghii	Rroxscaffold_4G00295040
rosa_rugosa	Rorug01G0288300
rosa_samantha	Rh1AG299500 Rh1BG263300 Rh1CG280900 Rh1DG293400
rosa_wichuraiana	Rw1G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1289
Acc65I	GGTACC	1 cut(s)	1283
AccB1I	GGYRCC	1 cut(s)	1283
AccII	CGCG	2 cut(s)	1608, 2384
AciI	CCGC	5 cut(s)	310, 1606, 2382, 2384, 2443
AclI	AACGTT	2 cut(s)	935, 1763
AcsI	RAATTY	4 cut(s)	103, 257, 548, 1950
AcuI	CTGAAG	2 cut(s)	1769, 1857
AdeI	CACNNNGTG	1 cut(s)	2094
AfaI	GTAC	7 cut(s)	317, 1285, 1340, 1704, 2045, 2399, 2423
AfiI	CCNNNNNNNGG	3 cut(s)	552, 1280, 2442
AflII	CTTAAG	1 cut(s)	2437
AflIII	ACRYGT	1 cut(s)	1321
AjnI	CCWGG	4 cut(s)	75, 289, 445, 2199
AloI	GAACNNNNNNTCC	2 cut(s)	925, 957
Alw21I	GWGCWC	1 cut(s)	1128
Alw26I	GTCTC	3 cut(s)	120, 1613, 1806
Alw44I	GTGCAC	1 cut(s)	1124
AlwNI	CAGNNNCTG	1 cut(s)	1904
Ama87I	CYCGRG	2 cut(s)	1100, 1289
AoxI	GGCC	5 cut(s)	361, 385, 917, 1242, 1745
ApaLI	GTGCAC	1 cut(s)	1124
ApeKI	GCWGC	3 cut(s)	486, 1358, 1904
ApoI	RAATTY	4 cut(s)	103, 257, 548, 1950
AseI	ATTAAT	1 cut(s)	2021
Asp700I	GAANNNNTTC	1 cut(s)	2391
Asp718I	GGTACC	1 cut(s)	1283
AspLEI	GCGC	1 cut(s)	806
AspS9I	GGNCC	2 cut(s)	1745, 1934
AsuC2I	CCSGG	2 cut(s)	930, 2151
AsuHPI	GGTGA	3 cut(s)	536, 749, 2425
AsuNHI	GCTAGC	1 cut(s)	989
AvaI	CYCGRG	2 cut(s)	1100, 1289
AvaII	GGWCC	1 cut(s)	1934
BaeGI	GKGCMC	1 cut(s)	1128
BaeI	ACNNNNGTAYC	2 cut(s)	887, 920
BamHI	GGATCC	2 cut(s)	1109, 1567
BanI	GGYRCC	1 cut(s)	1283
BbsI	GAAGAC	2 cut(s)	2106, 2325
Bbv12I	GWGCWC	1 cut(s)	1128
BbvI	GCAGC	3 cut(s)	473, 1345, 1891
BciT130I	CCWGG	4 cut(s)	77, 291, 447, 2201
BcnI	CCSGG	2 cut(s)	930, 2151
BcoDI	GTCTC	3 cut(s)	120, 1613, 1806
BfaI	CTAG	7 cut(s)	20, 278, 990, 1022, 1553, 1673, 1820
BfrI	CTTAAG	1 cut(s)	2437
BisI	GCNGC	6 cut(s)	310, 487, 1359, 1606, 1905, 2382
BlsI	GCNGC	6 cut(s)	311, 488, 1360, 1607, 1906, 2383
BmcAI	AGTACT	1 cut(s)	2399
Bme1390I	CCNGG	6 cut(s)	77, 291, 447, 930, 2151, 2201
Bme18I	GGWCC	1 cut(s)	1934
BmeT110I	CYCGRG	2 cut(s)	1100, 1289
BmgT120I	GGNCC	2 cut(s)	1745, 1934
BmiI	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1569, 2139
BmrFI	CCNGG	6 cut(s)	77, 291, 447, 930, 2151, 2201
BmsI	GCATC	6 cut(s)	526, 752, 774, 786, 1217, 1823
BmtI	GCTAGC	1 cut(s)	993
BpiI	GAAGAC	2 cut(s)	2106, 2325
BpmI	CTGGAG	3 cut(s)	59, 774, 1759
BpuEI	CTTGAG	3 cut(s)	553, 1505, 1775
BpuMI	CCSGG	2 cut(s)	930, 2151
BsaI	GGTCTC	1 cut(s)	120
BsaJI	CCNNGG	6 cut(s)	469, 648, 1692, 1913, 2200, 2382
BsaWI	WCCGGW	1 cut(s)	1203
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	3 cut(s)	552, 1280, 2442
Bse1I	ACTGG	5 cut(s)	313, 757, 1263, 1419, 2118
Bse3DI	GCAATG	5 cut(s)	466, 1116, 1353, 1644, 2223
BseBI	CCWGG	4 cut(s)	77, 291, 447, 2201
BseDI	CCNNGG	6 cut(s)	469, 648, 1692, 1913, 2200, 2382
BseGI	GGATG	7 cut(s)	644, 767, 1111, 1232, 1909, 2079, 2122
BseLI	CCNNNNNNNGG	3 cut(s)	552, 1280, 2442
BseMI	GCAATG	5 cut(s)	466, 1116, 1353, 1644, 2223
BseMII	CTCAG	3 cut(s)	549, 962, 2289
BseNI	ACTGG	5 cut(s)	313, 757, 1263, 1419, 2118
BseRI	GAGGAG	3 cut(s)	286, 802, 2274
BseSI	GKGCMC	1 cut(s)	1128
BseXI	GCAGC	3 cut(s)	473, 1345, 1891
BsgI	GTGCAG	3 cut(s)	577, 1734, 1890
Bsh1236I	CGCG	2 cut(s)	1608, 2384
BshFI	GGCC	5 cut(s)	363, 387, 919, 1244, 1747
BshNI	GGYRCC	1 cut(s)	1283
BsiHKAI	GWGCWC	1 cut(s)	1128
BsiHKCI	CYCGRG	2 cut(s)	1100, 1289
BsiSI	CCGG	3 cut(s)	929, 1204, 2150
BslI	CCNNNNNNNGG	3 cut(s)	552, 1280, 2442
BsmAI	GTCTC	3 cut(s)	120, 1613, 1806
BsnI	GGCC	5 cut(s)	363, 387, 919, 1244, 1747
Bso31I	GGTCTC	1 cut(s)	120
BsoBI	CYCGRG	2 cut(s)	1100, 1289
Bsp1286I	GDGCHC	1 cut(s)	1128
BspACI	CCGC	5 cut(s)	310, 1606, 2382, 2384, 2443
BspANI	GGCC	5 cut(s)	363, 387, 919, 1244, 1747
BspCNI	CTCAG	3 cut(s)	548, 961, 2290
BspFNI	CGCG	2 cut(s)	1608, 2384
BspHI	TCATGA	2 cut(s)	1426, 1585
BspLI	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1569, 2139
BspOI	GCTAGC	1 cut(s)	993
BspT107I	GGYRCC	1 cut(s)	1283
BspTI	CTTAAG	1 cut(s)	2437
BspTNI	GGTCTC	1 cut(s)	120
BsrDI	GCAATG	5 cut(s)	466, 1116, 1353, 1644, 2223
BsrI	ACTGG	5 cut(s)	313, 757, 1263, 1419, 2118
BssECI	CCNNGG	6 cut(s)	469, 648, 1692, 1913, 2200, 2382
BssT1I	CCWWGG	4 cut(s)	469, 648, 1692, 1913
Bst2UI	CCWGG	4 cut(s)	77, 291, 447, 2201
Bst4CI	ACNGT	3 cut(s)	248, 1283, 1624
Bst6I	CTCTTC	6 cut(s)	304, 412, 878, 1041, 1551, 1708
BstAFI	CTTAAG	1 cut(s)	2437
BstAPI	GCANNNNNTGC	2 cut(s)	1634, 2234
BstC8I	GCNNGC	6 cut(s)	484, 991, 1498, 1610, 1749, 2166
BstDEI	CTNAG	6 cut(s)	55, 343, 535, 948, 2122, 2298
BstDSI	CCRYGG	1 cut(s)	2382
BstF5I	GGATG	7 cut(s)	644, 767, 1111, 1232, 1909, 2079, 2122
BstFNI	CGCG	2 cut(s)	1608, 2384
BstHHI	GCGC	1 cut(s)	806
BstMAI	GTCTC	3 cut(s)	120, 1613, 1806
BstNI	CCWGG	4 cut(s)	77, 291, 447, 2201
BstNSI	RCATGY	1 cut(s)	1325
BstSCI	CCNGG	6 cut(s)	75, 289, 445, 928, 2149, 2199
BstSLI	GKGCMC	1 cut(s)	1128
BstUI	CGCG	2 cut(s)	1608, 2384
BstV1I	GCAGC	3 cut(s)	473, 1345, 1891
BstV2I	GAAGAC	2 cut(s)	2106, 2325
BstX2I	RGATCY	3 cut(s)	1109, 1567, 2407
BstYI	RGATCY	3 cut(s)	1109, 1567, 2407
BsuRI	GGCC	5 cut(s)	363, 387, 919, 1244, 1747
BtgI	CCRYGG	1 cut(s)	2382
BtgZI	GCGATG	1 cut(s)	2273
BtsCI	GGATG	7 cut(s)	644, 767, 1111, 1232, 1909, 2079, 2122
BtsI	GCAGTG	3 cut(s)	636, 1729, 2358
BtsIMutI	CAGTG	7 cut(s)	543, 636, 1729, 2058, 2111, 2295, 2358
Cac8I	GCNNGC	6 cut(s)	484, 991, 1498, 1610, 1749, 2166
CaiI	CAGNNNCTG	1 cut(s)	1904
CciI	TCATGA	2 cut(s)	1426, 1585
CfoI	GCGC	1 cut(s)	806
Cfr13I	GGNCC	2 cut(s)	1745, 1934
Cfr42I	CCGCGG	1 cut(s)	2385
CseI	GACGC	1 cut(s)	190
Csp6I	GTAC	7 cut(s)	316, 1284, 1339, 1703, 2044, 2398, 2422
CviQI	GTAC	7 cut(s)	316, 1284, 1339, 1703, 2044, 2398, 2422
DdeI	CTNAG	6 cut(s)	55, 343, 535, 948, 2122, 2298
DraIII	CACNNNGTG	1 cut(s)	2094
Eam1104I	CTCTTC	6 cut(s)	304, 412, 878, 1041, 1551, 1708
EarI	CTCTTC	6 cut(s)	304, 412, 878, 1041, 1551, 1708
Eco130I	CCWWGG	4 cut(s)	469, 648, 1692, 1913
Eco147I	AGGCCT	2 cut(s)	387, 919
Eco31I	GGTCTC	1 cut(s)	120
Eco32I	GATATC	2 cut(s)	1794, 1974
Eco47I	GGWCC	1 cut(s)	1934
Eco57I	CTGAAG	2 cut(s)	1769, 1857
Eco88I	CYCGRG	2 cut(s)	1100, 1289
EcoO109I	RGGNCCY	1 cut(s)	1745
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	4 cut(s)	75, 289, 445, 2199
EcoRV	GATATC	2 cut(s)	1794, 1974
EcoT14I	CCWWGG	4 cut(s)	469, 648, 1692, 1913
EcoT22I	ATGCAT	1 cut(s)	767
ErhI	CCWWGG	4 cut(s)	469, 648, 1692, 1913
FalI	AAGNNNNNCTT	2 cut(s)	944, 976
FauNDI	CATATG	1 cut(s)	799
Fnu4HI	GCNGC	6 cut(s)	310, 487, 1359, 1606, 1905, 2382
FokI	GGATG	7 cut(s)	631, 774, 1118, 1239, 1896, 2066, 2129
Fsp4HI	GCNGC	6 cut(s)	310, 487, 1359, 1606, 1905, 2382
FspBI	CTAG	7 cut(s)	20, 278, 990, 1022, 1553, 1673, 1820
GlaI	GCGC	1 cut(s)	805
GluI	GCNGC	6 cut(s)	310, 487, 1359, 1606, 1905, 2382
GsuI	CTGGAG	3 cut(s)	59, 774, 1759
HaeIII	GGCC	5 cut(s)	363, 387, 919, 1244, 1747
HapII	CCGG	3 cut(s)	929, 1204, 2150
HgaI	GACGC	1 cut(s)	190
HhaI	GCGC	1 cut(s)	806
Hin6I	GCGC	1 cut(s)	804
HinP1I	GCGC	1 cut(s)	804
HincII	GTYRAC	1 cut(s)	205
HindII	GTYRAC	1 cut(s)	205
HindIII	AAGCTT	1 cut(s)	1058
HinfI	GANTC	7 cut(s)	404, 997, 1159, 1423, 1808, 1873, 2302
HpaII	CCGG	3 cut(s)	929, 1204, 2150
HphI	GGTGA	3 cut(s)	536, 749, 2425
Hpy166II	GTNNAC	4 cut(s)	205, 958, 1126, 2356
Hpy188III	TCNNGA	8 cut(s)	722, 1331, 1427, 1484, 1586, 1805, 1828, 1925
Hpy8I	GTNNAC	4 cut(s)	205, 958, 1126, 2356
Hpy99I	CGWCG	1 cut(s)	2310
HpyAV	CCTTC	8 cut(s)	52, 140, 151, 752, 946, 1427, 1605, 1793
HpyCH4III	ACNGT	3 cut(s)	248, 1283, 1624
HpyCH4IV	ACGT	2 cut(s)	935, 1763
HpyF3I	CTNAG	6 cut(s)	55, 343, 535, 948, 2122, 2298
HpySE526I	ACGT	2 cut(s)	935, 1763
HspAI	GCGC	1 cut(s)	804
KpnI	GGTACC	1 cut(s)	1287
KspI	CCGCGG	1 cut(s)	2385
LmnI	GCTCC	4 cut(s)	299, 596, 871, 1948
Lsp1109I	GCAGC	3 cut(s)	473, 1345, 1891
LweI	GCATC	6 cut(s)	526, 752, 774, 786, 1217, 1823
MaeI	CTAG	7 cut(s)	20, 278, 990, 1022, 1553, 1673, 1820
MaeII	ACGT	2 cut(s)	935, 1763
MaeIII	GTNAC	3 cut(s)	3, 524, 671
MflI	RGATCY	3 cut(s)	1109, 1567, 2407
MhlI	GDGCHC	1 cut(s)	1128
MlyI	GAGTC	3 cut(s)	398, 991, 1432
MmeI	TCCRAC	2 cut(s)	600, 618
Mph1103I	ATGCAT	1 cut(s)	767
MroXI	GAANNNNTTC	1 cut(s)	2391
MseI	TTAA	8 cut(s)	48, 225, 845, 924, 1862, 2021, 2025, 2438
MslI	CAYNNNNRTG	5 cut(s)	522, 1121, 1829, 2070, 2262
MspA1I	CMGCKG	1 cut(s)	2384
MspCI	CTTAAG	1 cut(s)	2437
MspI	CCGG	3 cut(s)	929, 1204, 2150
MspR9I	CCNGG	6 cut(s)	77, 291, 447, 930, 2151, 2201
MvaI	CCWGG	4 cut(s)	77, 291, 447, 2201
MvnI	CGCG	2 cut(s)	1608, 2384
NciI	CCSGG	2 cut(s)	930, 2151
NdeI	CATATG	1 cut(s)	799
NheI	GCTAGC	1 cut(s)	989
NlaIV	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1569, 2139
NmeAIII	GCCGAG	2 cut(s)	979, 2443
NmuCI	GTSAC	1 cut(s)	524
NsiI	ATGCAT	1 cut(s)	767
NspI	RCATGY	1 cut(s)	1325
PacI	TTAATTAA	1 cut(s)	2025
PaeR7I	CTCGAG	1 cut(s)	1289
PagI	TCATGA	2 cut(s)	1426, 1585
PceI	AGGCCT	2 cut(s)	387, 919
PciI	ACATGT	1 cut(s)	1321
PcsI	WCGNNNNNNNCGW	1 cut(s)	1287
PdmI	GAANNNNTTC	1 cut(s)	2391
PfeI	GAWTC	4 cut(s)	1159, 1808, 1873, 2302
PflFI	GACNNNGTC	1 cut(s)	377
PfoI	TCCNGGA	1 cut(s)	75
PkrI	GCNGC	6 cut(s)	311, 488, 1360, 1607, 1906, 2383
PleI	GAGTC	3 cut(s)	398, 991, 1431
PpsI	GAGTC	3 cut(s)	398, 991, 1431
PscI	ACATGT	1 cut(s)	1321
PshBI	ATTAAT	1 cut(s)	2021
Psp1406I	AACGTT	2 cut(s)	935, 1763
Psp6I	CCWGG	4 cut(s)	75, 289, 445, 2199
PspGI	CCWGG	4 cut(s)	75, 289, 445, 2199
PspN4I	GGNNCC	7 cut(s)	235, 295, 592, 1111, 1285, 1569, 2139
PspPI	GGNCC	2 cut(s)	1745, 1934
PspXI	VCTCGAGB	1 cut(s)	1289
PstNI	CAGNNNCTG	1 cut(s)	1904
PsuI	RGATCY	3 cut(s)	1109, 1567, 2407
PsyI	GACNNNGTC	1 cut(s)	377
RsaI	GTAC	7 cut(s)	317, 1285, 1340, 1704, 2045, 2399, 2423
RsaNI	GTAC	7 cut(s)	316, 1284, 1339, 1703, 2044, 2398, 2422
RseI	CAYNNNNRTG	5 cut(s)	522, 1121, 1829, 2070, 2262
SacII	CCGCGG	1 cut(s)	2385
SaqAI	TTAA	8 cut(s)	48, 225, 845, 924, 1862, 2021, 2025, 2438
SatI	GCNGC	6 cut(s)	310, 487, 1359, 1606, 1905, 2382
Sau96I	GGNCC	2 cut(s)	1745, 1934
ScaI	AGTACT	1 cut(s)	2399
SchI	GAGTC	3 cut(s)	398, 991, 1432
ScrFI	CCNGG	6 cut(s)	77, 291, 447, 930, 2151, 2201
SduI	GDGCHC	1 cut(s)	1128
SfaNI	GCATC	6 cut(s)	526, 752, 774, 786, 1217, 1823
Sfr274I	CTCGAG	1 cut(s)	1289
Sfr303I	CCGCGG	1 cut(s)	2385
SgrBI	CCGCGG	1 cut(s)	2385
SinI	GGWCC	1 cut(s)	1934
SlaI	CTCGAG	1 cut(s)	1289
SmiMI	CAYNNNNRTG	5 cut(s)	522, 1121, 1829, 2070, 2262
SmlI	CTYRAG	5 cut(s)	568, 1289, 1484, 1754, 2437
SmoI	CTYRAG	5 cut(s)	568, 1289, 1484, 1754, 2437
SseBI	AGGCCT	2 cut(s)	387, 919
SsiI	CCGC	5 cut(s)	310, 1606, 2382, 2384, 2443
SspI	AATATT	1 cut(s)	1086
SspMI	CTAG	7 cut(s)	20, 278, 990, 1022, 1553, 1673, 1820
StuI	AGGCCT	2 cut(s)	387, 919
StyD4I	CCNGG	6 cut(s)	75, 289, 445, 928, 2149, 2199
StyI	CCWWGG	4 cut(s)	469, 648, 1692, 1913
TaaI	ACNGT	3 cut(s)	248, 1283, 1624
TaiI	ACGT	2 cut(s)	938, 1766
TaqI	TCGA	4 cut(s)	255, 1290, 1421, 2402
TatI	WGTACW	5 cut(s)	315, 1702, 2043, 2397, 2421
TauI	GCSGC	3 cut(s)	312, 1608, 2384
TfiI	GAWTC	4 cut(s)	1159, 1808, 1873, 2302
Tru1I	TTAA	8 cut(s)	48, 225, 845, 924, 1862, 2021, 2025, 2438
Tru9I	TTAA	8 cut(s)	48, 225, 845, 924, 1862, 2021, 2025, 2438
TscAI	CASTG	7 cut(s)	543, 636, 1729, 2058, 2118, 2302, 2358
TseFI	GTSAC	1 cut(s)	524
TseI	GCWGC	3 cut(s)	486, 1358, 1904
Tsp45I	GTSAC	1 cut(s)	524
TspRI	CASTG	7 cut(s)	543, 636, 1729, 2058, 2118, 2302, 2358
Tth111I	GACNNNGTC	1 cut(s)	377
Vha464I	CTTAAG	1 cut(s)	2437
VneI	GTGCAC	1 cut(s)	1124
VpaK11BI	GGWCC	1 cut(s)	1934
VspI	ATTAAT	1 cut(s)	2021
XapI	RAATTY	4 cut(s)	103, 257, 548, 1950
XceI	RCATGY	1 cut(s)	1325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	119
XhoI	CTCGAG	1 cut(s)	1289
XmnI	GAANNNNTTC	1 cut(s)	2391
XspI	CTAG	7 cut(s)	20, 278, 990, 1022, 1553, 1673, 1820
ZrmI	AGTACT	1 cut(s)	2399
Zsp2I	ATGCAT	1 cut(s)	767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.