RchiOBHm_Chr2g0098491

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
10944328 .. 10946382
2055 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47328

Sequence Viewer

Length: 150 bp
ATGACGGAACTCGAATGCATGATCGTCCGAATAGTACTTTTGCAGGCTAGGTTAATTGAGGTTGGGCGTACATGGAGTCGAGGCATAGCCAACAGCATCGCTTCCGCGTACTCATTCTATTTCTGTGTTCTTTACTACCTAATGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.72

Weight (kDa)

6.13

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 107
AciI CCGC 1 cut(s) 105
AfaI GTAC 3 cut(s) 36, 70, 110
BfaI CTAG 1 cut(s) 48
BmcAI AGTACT 1 cut(s) 36
BmsI GCATC 1 cut(s) 105
Bsh1236I CGCG 1 cut(s) 107
BsmI GAATGC 1 cut(s) 20
Bsp143I GATC 1 cut(s) 21
BspACI CCGC 1 cut(s) 105
BspFNI CGCG 1 cut(s) 107
BssMI GATC 1 cut(s) 21
BstC8I GCNNGC 1 cut(s) 45
BstFNI CGCG 1 cut(s) 107
BstKTI GATC 1 cut(s) 24
BstMBI GATC 1 cut(s) 21
BstUI CGCG 1 cut(s) 107
BtgZI GCGATG 1 cut(s) 82
Cac8I GCNNGC 1 cut(s) 45
Csp6I GTAC 3 cut(s) 35, 69, 109
CviAII CATG 2 cut(s) 19, 72
CviJI RGCY 2 cut(s) 47, 89
CviKI_1 RGCY 2 cut(s) 47, 89
CviQI GTAC 3 cut(s) 35, 69, 109
DpnI GATC 1 cut(s) 23
DpnII GATC 1 cut(s) 21
EcoT22I ATGCAT 1 cut(s) 20
FaeI CATG 2 cut(s) 22, 75
FaiI YATR 3 cut(s) 20, 73, 86
FatI CATG 2 cut(s) 18, 71
FspBI CTAG 1 cut(s) 48
Hin1II CATG 2 cut(s) 22, 75
HinfI GANTC 1 cut(s) 76
Hpy188I TCNGA 1 cut(s) 29
HpyCH4V TGCA 2 cut(s) 18, 43
Hsp92II CATG 2 cut(s) 22, 75
Kzo9I GATC 1 cut(s) 21
LpnPI CCDG 1 cut(s) 29
LweI GCATC 1 cut(s) 105
MaeI CTAG 1 cut(s) 48
MalI GATC 1 cut(s) 23
MboI GATC 1 cut(s) 21
MluCI AATT 1 cut(s) 54
MlyI GAGTC 1 cut(s) 85
MnlI CCTC 2 cut(s) 52, 74
Mph1103I ATGCAT 1 cut(s) 20
MseI TTAA 1 cut(s) 53
Mva1269I GAATGC 1 cut(s) 20
MvnI CGCG 1 cut(s) 107
NdeII GATC 1 cut(s) 21
NlaIII CATG 2 cut(s) 22, 75
NsiI ATGCAT 1 cut(s) 20
PctI GAATGC 1 cut(s) 20
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
RsaI GTAC 3 cut(s) 36, 70, 110
RsaNI GTAC 3 cut(s) 35, 69, 109
SaqAI TTAA 1 cut(s) 53
Sau3AI GATC 1 cut(s) 21
ScaI AGTACT 1 cut(s) 36
SchI GAGTC 1 cut(s) 85
SetI ASST 3 cut(s) 53, 63, 141
SfaNI GCATC 1 cut(s) 105
SgeI CNNG 7 cut(s) 23, 31, 56, 60, 84, 92, 118
Sse9I AATT 1 cut(s) 54
SsiI CCGC 1 cut(s) 105
SspMI CTAG 1 cut(s) 48
TaqI TCGA 2 cut(s) 12, 79
TasI AATT 1 cut(s) 54
TatI WGTACW 1 cut(s) 34
Tru1I TTAA 1 cut(s) 53
Tru9I TTAA 1 cut(s) 53
TspGWI ACGGA 1 cut(s) 20
XspI CTAG 1 cut(s) 48
ZrmI AGTACT 1 cut(s) 36
Zsp2I ATGCAT 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.