RchiOBHm_Chr5g0076501

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
82175854 .. 82177228
1375 bp
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UTR
Exon/CDS
Intron
PRQ35115

Sequence Viewer

Length: 126 bp
ATGGGAGATGTAATTGACGACGTACCGAGCTATTGCTCGATGACGGAACACAAATGCGTGATCGTCGGAATAGTACTTTTGCAGGCGAATTGGTTGAGGTTGGGCGTACACGGAGTTGAGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

41

Amino Acids

4.47

Weight (kDa)

4.8

Isoelectric Point (pI)

27.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 3 cut(s) 24, 75, 108
AluBI AGCT 1 cut(s) 30
AluI AGCT 1 cut(s) 30
BmcAI AGTACT 1 cut(s) 75
Bsp143I GATC 1 cut(s) 60
BssMI GATC 1 cut(s) 60
BstC8I GCNNGC 1 cut(s) 84
BstKTI GATC 1 cut(s) 63
BstMBI GATC 1 cut(s) 60
Cac8I GCNNGC 1 cut(s) 84
Csp6I GTAC 3 cut(s) 23, 74, 107
CviJI RGCY 1 cut(s) 30
CviKI_1 RGCY 1 cut(s) 30
CviQI GTAC 3 cut(s) 23, 74, 107
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
FaiI YATR 1 cut(s) 124
Hpy166II GTNNAC 1 cut(s) 109
Hpy188I TCNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 109
Hpy99I CGWCG 2 cut(s) 23, 68
HpyCH4IV ACGT 1 cut(s) 21
HpyCH4V TGCA 1 cut(s) 82
HpySE526I ACGT 1 cut(s) 21
Kzo9I GATC 1 cut(s) 60
LpnPI CCDG 1 cut(s) 68
MaeII ACGT 1 cut(s) 21
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MluCI AATT 2 cut(s) 12, 88
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 2 cut(s) 90, 112
NdeII GATC 1 cut(s) 60
RsaI GTAC 3 cut(s) 24, 75, 108
RsaNI GTAC 3 cut(s) 23, 74, 107
Sau3AI GATC 1 cut(s) 60
ScaI AGTACT 1 cut(s) 75
SetI ASST 3 cut(s) 24, 32, 101
SgeI CNNG 5 cut(s) 39, 49, 70, 95, 122
Sse9I AATT 2 cut(s) 12, 88
TaiI ACGT 1 cut(s) 24
TaqI TCGA 1 cut(s) 38
TasI AATT 2 cut(s) 12, 88
TatI WGTACW 1 cut(s) 73
TspGWI ACGGA 2 cut(s) 59, 126
ZrmI AGTACT 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.