No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0098491 RchiOBHm_Chr3g0495441 RchiOBHm_Chr4g0384921 RchiOBHm_Chr5g0076501 |
| rosa_multiflora | Rmu_ssc0000136.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00033970 Rroxscaffold_6G00392330 |
| rosa_rugosa | Rorug06G0027000 |
| rosa_samantha | Rh2AG231400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 115 |
| AciI | CCGC | 1 cut(s) | 75 |
| AclWI | GGATC | 1 cut(s) | 172 |
| AcoI | YGGCCR | 1 cut(s) | 154 |
| AfaI | GTAC | 1 cut(s) | 40 |
| AgsI | TTSAA | 1 cut(s) | 89 |
| AlwI | GGATC | 1 cut(s) | 172 |
| AoxI | GGCC | 1 cut(s) | 154 |
| AsuC2I | CCSGG | 1 cut(s) | 6 |
| BalI | TGGCCA | 1 cut(s) | 156 |
| BcnI | CCSGG | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 6 |
| BpuMI | CCSGG | 1 cut(s) | 6 |
| BshFI | GGCC | 1 cut(s) | 156 |
| BsiSI | CCGG | 1 cut(s) | 6 |
| BsnI | GGCC | 1 cut(s) | 156 |
| Bsp143I | GATC | 1 cut(s) | 164 |
| BspACI | CCGC | 1 cut(s) | 75 |
| BspANI | GGCC | 1 cut(s) | 156 |
| BspPI | GGATC | 1 cut(s) | 172 |
| BssMI | GATC | 1 cut(s) | 164 |
| BssNAI | GTATAC | 1 cut(s) | 116 |
| Bst1107I | GTATAC | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 1 cut(s) | 15 |
| BstKTI | GATC | 1 cut(s) | 167 |
| BstMBI | GATC | 1 cut(s) | 164 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstSCI | CCNGG | 1 cut(s) | 4 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 67 |
| BstZ17I | GTATAC | 1 cut(s) | 116 |
| BsuRI | GGCC | 1 cut(s) | 156 |
| Cac8I | GCNNGC | 1 cut(s) | 15 |
| Csp6I | GTAC | 1 cut(s) | 39 |
| CviAII | CATG | 2 cut(s) | 42, 193 |
| CviJI | RGCY | 3 cut(s) | 59, 71, 156 |
| CviKI_1 | RGCY | 3 cut(s) | 59, 71, 156 |
| CviQI | GTAC | 1 cut(s) | 39 |
| DpnI | GATC | 1 cut(s) | 166 |
| DpnII | GATC | 1 cut(s) | 164 |
| EaeI | YGGCCR | 1 cut(s) | 154 |
| FaeI | CATG | 2 cut(s) | 45, 196 |
| FaiI | YATR | 8 cut(s) | 43, 56, 68, 116, 147, 169, 171, 194 |
| FatI | CATG | 2 cut(s) | 41, 192 |
| FauNDI | CATATG | 1 cut(s) | 169 |
| FblI | GTMKAC | 1 cut(s) | 115 |
| HaeIII | GGCC | 1 cut(s) | 156 |
| HapII | CCGG | 1 cut(s) | 6 |
| Hin1II | CATG | 2 cut(s) | 45, 196 |
| HinfI | GANTC | 2 cut(s) | 46, 205 |
| HpaII | CCGG | 1 cut(s) | 6 |
| Hpy166II | GTNNAC | 1 cut(s) | 116 |
| Hpy8I | GTNNAC | 1 cut(s) | 116 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 1 cut(s) | 13 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 2 cut(s) | 45, 196 |
| Kzo9I | GATC | 1 cut(s) | 164 |
| LpnPI | CCDG | 2 cut(s) | 19, 183 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MalI | GATC | 1 cut(s) | 166 |
| MboI | GATC | 1 cut(s) | 164 |
| MlsI | TGGCCA | 1 cut(s) | 156 |
| MluCI | AATT | 4 cut(s) | 20, 142, 159, 174 |
| MluNI | TGGCCA | 1 cut(s) | 156 |
| MnlI | CCTC | 2 cut(s) | 22, 44 |
| Mox20I | TGGCCA | 1 cut(s) | 156 |
| MscI | TGGCCA | 1 cut(s) | 156 |
| MseI | TTAA | 1 cut(s) | 211 |
| Msp20I | TGGCCA | 1 cut(s) | 156 |
| MspI | CCGG | 1 cut(s) | 6 |
| MspR9I | CCNGG | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NciI | CCSGG | 1 cut(s) | 6 |
| NdeI | CATATG | 1 cut(s) | 169 |
| NdeII | GATC | 1 cut(s) | 164 |
| NlaIII | CATG | 2 cut(s) | 45, 196 |
| PfeI | GAWTC | 2 cut(s) | 46, 205 |
| RsaI | GTAC | 1 cut(s) | 40 |
| RsaNI | GTAC | 1 cut(s) | 39 |
| SaqAI | TTAA | 1 cut(s) | 211 |
| Sau3AI | GATC | 1 cut(s) | 164 |
| ScrFI | CCNGG | 1 cut(s) | 6 |
| SetI | ASST | 3 cut(s) | 33, 127, 202 |
| SgeI | CNNG | 9 cut(s) | 17, 18, 26, 46, 54, 62, 118, 135, 205 |
| Sse9I | AATT | 4 cut(s) | 20, 142, 159, 174 |
| SsiI | CCGC | 1 cut(s) | 75 |
| StyD4I | CCNGG | 1 cut(s) | 4 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TaqI | TCGA | 3 cut(s) | 33, 49, 137 |
| TasI | AATT | 4 cut(s) | 20, 142, 159, 174 |
| TfiI | GAWTC | 2 cut(s) | 46, 205 |
| Tru1I | TTAA | 1 cut(s) | 211 |
| Tru9I | TTAA | 1 cut(s) | 211 |
| TspDTI | ATGAA | 3 cut(s) | 118, 186, 197 |
| XmiI | GTMKAC | 1 cut(s) | 115 |