RchiOBHm_Chr3g0495441

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
44947763 .. 44948251
489 bp
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UTR
Exon/CDS
Intron
PRQ45786

Sequence Viewer

Length: 135 bp
ATGCCCAGTTTGCAGGCTAGGTTAATTGAGGTCGGGCGTACATGGAGTCGAGGCATAGCCAACAGCATTGCTTCCGCGTACTCAATTCTATTTTTGTTTTCGTTATTATCTAGTGGGATGGCTCCAGGAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

44

Amino Acids

4.7

Weight (kDa)

8.5

Isoelectric Point (pI)

50.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 77
AciI CCGC 1 cut(s) 75
AfaI GTAC 2 cut(s) 40, 80
AjnI CCWGG 1 cut(s) 124
BccI CCATC 1 cut(s) 112
BciT130I CCWGG 1 cut(s) 126
BfaI CTAG 2 cut(s) 18, 111
Bme1390I CCNGG 1 cut(s) 126
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 126
BpmI CTGGAG 1 cut(s) 108
Bse1I ACTGG 1 cut(s) 6
Bse3DI GCAATG 1 cut(s) 66
BseBI CCWGG 1 cut(s) 126
BseGI GGATG 1 cut(s) 123
BseMI GCAATG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 6
Bsh1236I CGCG 1 cut(s) 77
BspACI CCGC 1 cut(s) 75
BspFNI CGCG 1 cut(s) 77
BspLI GGNNCC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 66
BsrI ACTGG 1 cut(s) 6
Bst2UI CCWGG 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 15
BstF5I GGATG 1 cut(s) 123
BstFNI CGCG 1 cut(s) 77
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 126
BstSCI CCNGG 1 cut(s) 124
BstUI CGCG 1 cut(s) 77
BtsCI GGATG 1 cut(s) 123
Cac8I GCNNGC 1 cut(s) 15
Csp6I GTAC 2 cut(s) 39, 79
CviAII CATG 1 cut(s) 42
CviJI RGCY 3 cut(s) 17, 59, 122
CviKI_1 RGCY 3 cut(s) 17, 59, 122
CviQI GTAC 2 cut(s) 39, 79
EcoRII CCWGG 1 cut(s) 124
FaeI CATG 1 cut(s) 45
FaiI YATR 2 cut(s) 43, 56
FatI CATG 1 cut(s) 41
FokI GGATG 1 cut(s) 130
FspBI CTAG 2 cut(s) 18, 111
GsuI CTGGAG 1 cut(s) 108
Hin1II CATG 1 cut(s) 45
HinfI GANTC 1 cut(s) 46
HpyCH4V TGCA 1 cut(s) 13
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
Hsp92II CATG 1 cut(s) 45
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 2 cut(s) 19, 111
MaeI CTAG 2 cut(s) 18, 111
MluCI AATT 2 cut(s) 24, 84
MlyI GAGTC 1 cut(s) 55
MnlI CCTC 2 cut(s) 22, 44
MseI TTAA 1 cut(s) 23
MspR9I CCNGG 1 cut(s) 126
MvaI CCWGG 1 cut(s) 126
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 1 cut(s) 10
NlaIII CATG 1 cut(s) 45
NlaIV GGNNCC 1 cut(s) 123
PfoI TCCNGGA 1 cut(s) 124
PleI GAGTC 1 cut(s) 54
PpsI GAGTC 1 cut(s) 54
Psp6I CCWGG 1 cut(s) 124
PspGI CCWGG 1 cut(s) 124
PspN4I GGNNCC 1 cut(s) 123
RsaI GTAC 2 cut(s) 40, 80
RsaNI GTAC 2 cut(s) 39, 79
SaqAI TTAA 1 cut(s) 23
SchI GAGTC 1 cut(s) 55
ScrFI CCNGG 1 cut(s) 126
SetI ASST 2 cut(s) 23, 33
SgeI CNNG 8 cut(s) 18, 26, 30, 46, 54, 62, 88, 123
Sse9I AATT 2 cut(s) 24, 84
SsiI CCGC 1 cut(s) 75
SspMI CTAG 2 cut(s) 18, 111
StyD4I CCNGG 1 cut(s) 124
TaqI TCGA 1 cut(s) 49
TasI AATT 2 cut(s) 24, 84
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
XspI CTAG 2 cut(s) 18, 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.