RchiOBHm_Chr4g0384921

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
284536 .. 286215
1680 bp
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UTR
Exon/CDS
Intron
PRQ35846

Sequence Viewer

Length: 207 bp
ATGGAATATAATTGTGTACAGGACGACGTACCGAGCTATTGCTCGATGACGGAACTCGAATGTGTGATCGTCGGAATAGTACCTTTGCAGGCTAGGTTAATTGAGGTCGGGCGTACATGGAGTCGAGGCATAGCCAACAGCATTGCTTCCGCGTACTCAATCCTATTTCTGTTTTCGTTATTATCTAGTGGGTTAGTATTGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

7.46

Weight (kDa)

4.36

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 152
AciI CCGC 1 cut(s) 150
AfaI GTAC 5 cut(s) 18, 30, 81, 115, 155
AluBI AGCT 1 cut(s) 36
AluI AGCT 1 cut(s) 36
BfaI CTAG 2 cut(s) 93, 186
Bse3DI GCAATG 1 cut(s) 141
BseMI GCAATG 1 cut(s) 141
Bsh1236I CGCG 1 cut(s) 152
Bsp1407I TGTACA 1 cut(s) 16
Bsp143I GATC 1 cut(s) 66
BspACI CCGC 1 cut(s) 150
BspFNI CGCG 1 cut(s) 152
BsrDI GCAATG 1 cut(s) 141
BsrGI TGTACA 1 cut(s) 16
BssMI GATC 1 cut(s) 66
BstAUI TGTACA 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 90
BstFNI CGCG 1 cut(s) 152
BstKTI GATC 1 cut(s) 69
BstMBI GATC 1 cut(s) 66
BstUI CGCG 1 cut(s) 152
Cac8I GCNNGC 1 cut(s) 90
Csp6I GTAC 5 cut(s) 17, 29, 80, 114, 154
CviAII CATG 1 cut(s) 117
CviJI RGCY 3 cut(s) 36, 92, 134
CviKI_1 RGCY 3 cut(s) 36, 92, 134
CviQI GTAC 5 cut(s) 17, 29, 80, 114, 154
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
FaeI CATG 1 cut(s) 120
FaiI YATR 3 cut(s) 9, 118, 131
FatI CATG 1 cut(s) 116
FspBI CTAG 2 cut(s) 93, 186
Hin1II CATG 1 cut(s) 120
HinfI GANTC 1 cut(s) 121
Hpy166II GTNNAC 1 cut(s) 17
Hpy188I TCNGA 2 cut(s) 74, 206
Hpy8I GTNNAC 1 cut(s) 17
Hpy99I CGWCG 2 cut(s) 29, 74
HpyCH4IV ACGT 1 cut(s) 27
HpyCH4V TGCA 1 cut(s) 88
HpySE526I ACGT 1 cut(s) 27
Hsp92II CATG 1 cut(s) 120
Kzo9I GATC 1 cut(s) 66
LpnPI CCDG 2 cut(s) 5, 74
MaeI CTAG 2 cut(s) 93, 186
MaeII ACGT 1 cut(s) 27
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MluCI AATT 2 cut(s) 10, 99
MlyI GAGTC 1 cut(s) 130
MmeI TCCRAC 1 cut(s) 52
MnlI CCTC 2 cut(s) 97, 119
MseI TTAA 1 cut(s) 98
MvnI CGCG 1 cut(s) 152
NdeII GATC 1 cut(s) 66
NlaIII CATG 1 cut(s) 120
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
RsaI GTAC 5 cut(s) 18, 30, 81, 115, 155
RsaNI GTAC 5 cut(s) 17, 29, 80, 114, 154
SaqAI TTAA 1 cut(s) 98
Sau3AI GATC 1 cut(s) 66
SchI GAGTC 1 cut(s) 130
SetI ASST 5 cut(s) 30, 38, 85, 98, 108
Sse9I AATT 2 cut(s) 10, 99
SsiI CCGC 1 cut(s) 150
SspMI CTAG 2 cut(s) 93, 186
TaiI ACGT 1 cut(s) 30
TaqI TCGA 3 cut(s) 44, 57, 124
TasI AATT 2 cut(s) 10, 99
TatI WGTACW 1 cut(s) 16
Tru1I TTAA 1 cut(s) 98
Tru9I TTAA 1 cut(s) 98
TspGWI ACGGA 1 cut(s) 65
XspI CTAG 2 cut(s) 93, 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.