Pentatricopeptide repeat-containing protein At1g06145-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0105281 |
| rosa_laevigata | RLG00000021148 |
| rosa_multiflora | Rmu_sc0000994.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00090650 Rroxscaffold_4G00302920 |
| rosa_samantha | Rh2CG439100 Rh7AG285600 Rh7CG304600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 321 |
| AfaI | GTAC | 2 cut(s) | 76, 328 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 22, 23 |
| AgsI | TTSAA | 1 cut(s) | 307 |
| AhlI | ACTAGT | 1 cut(s) | 269 |
| AluBI | AGCT | 2 cut(s) | 181, 332 |
| AluI | AGCT | 2 cut(s) | 181, 332 |
| Alw26I | GTCTC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 1 cut(s) | 33 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 59, 209 |
| AsuII | TTCGAA | 1 cut(s) | 176 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 319, 351 |
| BbsI | GAAGAC | 1 cut(s) | 16 |
| BbvI | GCAGC | 1 cut(s) | 20 |
| BccI | CCATC | 2 cut(s) | 122, 227 |
| BcoDI | GTCTC | 1 cut(s) | 178 |
| BcuI | ACTAGT | 1 cut(s) | 269 |
| BfaI | CTAG | 1 cut(s) | 270 |
| BisI | GCNGC | 1 cut(s) | 34 |
| BlsI | GCNGC | 1 cut(s) | 35 |
| BmiI | GGNNCC | 1 cut(s) | 62 |
| BpiI | GAAGAC | 1 cut(s) | 16 |
| Bpu14I | TTCGAA | 1 cut(s) | 176 |
| BsaBI | GATNNNNATC | 1 cut(s) | 113 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 22, 23 |
| Bse1I | ACTGG | 1 cut(s) | 69 |
| Bse8I | GATNNNNATC | 1 cut(s) | 113 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseJI | GATNNNNATC | 1 cut(s) | 113 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 22, 23 |
| BseMII | CTCAG | 2 cut(s) | 173, 216 |
| BseNI | ACTGG | 1 cut(s) | 69 |
| BseXI | GCAGC | 1 cut(s) | 20 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 22, 23 |
| BsmAI | GTCTC | 1 cut(s) | 178 |
| BsmBI | CGTCTC | 1 cut(s) | 178 |
| Bsp119I | TTCGAA | 1 cut(s) | 176 |
| Bsp1407I | TGTACA | 1 cut(s) | 326 |
| Bsp143I | GATC | 2 cut(s) | 214, 357 |
| BspCNI | CTCAG | 2 cut(s) | 174, 217 |
| BspLI | GGNNCC | 1 cut(s) | 62 |
| BspT104I | TTCGAA | 1 cut(s) | 176 |
| BsrGI | TGTACA | 1 cut(s) | 326 |
| BsrI | ACTGG | 1 cut(s) | 69 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 2 cut(s) | 214, 357 |
| BssT1I | CCWWGG | 1 cut(s) | 93 |
| BstAUI | TGTACA | 1 cut(s) | 326 |
| BstBI | TTCGAA | 1 cut(s) | 176 |
| BstDEI | CTNAG | 2 cut(s) | 182, 225 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstKTI | GATC | 2 cut(s) | 217, 360 |
| BstMAI | GTCTC | 1 cut(s) | 178 |
| BstMBI | GATC | 2 cut(s) | 214, 357 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 338 |
| BstV1I | GCAGC | 1 cut(s) | 20 |
| BstV2I | GAAGAC | 1 cut(s) | 16 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 125 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| BtsIMutI | CAGTG | 1 cut(s) | 130 |
| Csp6I | GTAC | 2 cut(s) | 75, 327 |
| CviAII | CATG | 3 cut(s) | 140, 243, 367 |
| CviJI | RGCY | 5 cut(s) | 33, 98, 181, 200, 332 |
| CviKI_1 | RGCY | 5 cut(s) | 33, 98, 181, 200, 332 |
| CviQI | GTAC | 2 cut(s) | 75, 327 |
| DdeI | CTNAG | 2 cut(s) | 182, 225 |
| DpnI | GATC | 2 cut(s) | 216, 359 |
| DpnII | GATC | 2 cut(s) | 214, 357 |
| Eco130I | CCWWGG | 1 cut(s) | 93 |
| Eco57I | CTGAAG | 1 cut(s) | 321 |
| EcoT14I | CCWWGG | 1 cut(s) | 93 |
| ErhI | CCWWGG | 1 cut(s) | 93 |
| Esp3I | CGTCTC | 1 cut(s) | 178 |
| FaeI | CATG | 3 cut(s) | 143, 246, 370 |
| FaiI | YATR | 5 cut(s) | 141, 244, 284, 356, 368 |
| FatI | CATG | 3 cut(s) | 139, 242, 366 |
| Fnu4HI | GCNGC | 1 cut(s) | 34 |
| FokI | GGATG | 1 cut(s) | 101 |
| Fsp4HI | GCNGC | 1 cut(s) | 34 |
| FspBI | CTAG | 1 cut(s) | 270 |
| GluI | GCNGC | 1 cut(s) | 34 |
| Hin1II | CATG | 3 cut(s) | 143, 246, 370 |
| HinfI | GANTC | 1 cut(s) | 134 |
| Hpy166II | GTNNAC | 1 cut(s) | 327 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy188III | TCNNGA | 2 cut(s) | 6, 43 |
| Hpy8I | GTNNAC | 1 cut(s) | 327 |
| HpyAV | CCTTC | 1 cut(s) | 199 |
| HpyCH4IV | ACGT | 1 cut(s) | 77 |
| HpyCH4V | TGCA | 2 cut(s) | 242, 377 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 338 |
| HpyF3I | CTNAG | 2 cut(s) | 182, 225 |
| HpySE526I | ACGT | 1 cut(s) | 77 |
| Hsp92II | CATG | 3 cut(s) | 143, 246, 370 |
| Kzo9I | GATC | 2 cut(s) | 214, 357 |
| LpnPI | CCDG | 5 cut(s) | 8, 43, 82, 215, 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 20 |
| MaeI | CTAG | 1 cut(s) | 270 |
| MaeII | ACGT | 1 cut(s) | 77 |
| MalI | GATC | 2 cut(s) | 216, 359 |
| MboI | GATC | 2 cut(s) | 214, 357 |
| MboII | GAAGA | 2 cut(s) | 21, 252 |
| MluCI | AATT | 1 cut(s) | 189 |
| MnlI | CCTC | 2 cut(s) | 45, 288 |
| MroXI | GAANNNNTTC | 2 cut(s) | 59, 209 |
| MslI | CAYNNNNRTG | 2 cut(s) | 44, 123 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 338 |
| NdeII | GATC | 2 cut(s) | 214, 357 |
| NlaIII | CATG | 3 cut(s) | 143, 246, 370 |
| NlaIV | GGNNCC | 1 cut(s) | 62 |
| NspV | TTCGAA | 1 cut(s) | 176 |
| PdmI | GAANNNNTTC | 2 cut(s) | 59, 209 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| PkrI | GCNGC | 1 cut(s) | 35 |
| PspN4I | GGNNCC | 1 cut(s) | 62 |
| RsaI | GTAC | 2 cut(s) | 76, 328 |
| RsaNI | GTAC | 2 cut(s) | 75, 327 |
| RseI | CAYNNNNRTG | 2 cut(s) | 44, 123 |
| SatI | GCNGC | 1 cut(s) | 34 |
| Sau3AI | GATC | 2 cut(s) | 214, 357 |
| SetI | ASST | 7 cut(s) | 62, 80, 183, 210, 326, 334, 376 |
| SfuI | TTCGAA | 1 cut(s) | 176 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 44, 123 |
| SpeI | ACTAGT | 1 cut(s) | 269 |
| Sse9I | AATT | 1 cut(s) | 189 |
| SspMI | CTAG | 1 cut(s) | 270 |
| StyI | CCWWGG | 1 cut(s) | 93 |
| TaiI | ACGT | 1 cut(s) | 80 |
| TaqI | TCGA | 3 cut(s) | 176, 213, 360 |
| TasI | AATT | 1 cut(s) | 189 |
| TatI | WGTACW | 1 cut(s) | 326 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| TscAI | CASTG | 1 cut(s) | 130 |
| TseI | GCWGC | 1 cut(s) | 33 |
| TspDTI | ATGAA | 1 cut(s) | 383 |
| TspRI | CASTG | 1 cut(s) | 130 |
| XmnI | GAANNNNTTC | 2 cut(s) | 59, 209 |
| XspI | CTAG | 1 cut(s) | 270 |