Pentatricopeptide repeat-containing protein At1g06145-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0105281 |
| rosa_laevigata | RLG00000021148 |
| rosa_multiflora | Rmu_sc0000994.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00090650 Rroxscaffold_4G00302920 |
| rosa_samantha | Rh2CG439100 Rh7AG285600 Rh7CG304600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 279 |
| AfaI | GTAC | 2 cut(s) | 34, 286 |
| AgsI | TTSAA | 2 cut(s) | 311, 352 |
| AluBI | AGCT | 4 cut(s) | 139, 290, 299, 336 |
| AluI | AGCT | 4 cut(s) | 139, 290, 299, 336 |
| Alw26I | GTCTC | 1 cut(s) | 428 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 302 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 214 |
| AsuHPI | GGTGA | 1 cut(s) | 164 |
| AsuII | TTCGAA | 1 cut(s) | 134 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 277, 309 |
| BauI | CACGAG | 1 cut(s) | 228 |
| BbsI | GAAGAC | 1 cut(s) | 10 |
| BccI | CCATC | 2 cut(s) | 80, 185 |
| BcoDI | GTCTC | 1 cut(s) | 428 |
| BfaI | CTAG | 1 cut(s) | 207 |
| BmiI | GGNNCC | 1 cut(s) | 39 |
| BmrI | ACTGGG | 1 cut(s) | 312 |
| BmuI | ACTGGG | 1 cut(s) | 312 |
| BpiI | GAAGAC | 1 cut(s) | 10 |
| Bpu14I | TTCGAA | 1 cut(s) | 134 |
| BpuEI | CTTGAG | 1 cut(s) | 410 |
| BsaBI | GATNNNNATC | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 2 cut(s) | 51, 390 |
| Bse1I | ACTGG | 2 cut(s) | 27, 307 |
| Bse8I | GATNNNNATC | 1 cut(s) | 71 |
| BseDI | CCNNGG | 2 cut(s) | 51, 390 |
| BseGI | GGATG | 1 cut(s) | 72 |
| BseJI | GATNNNNATC | 1 cut(s) | 71 |
| BseMII | CTCAG | 1 cut(s) | 174 |
| BseNI | ACTGG | 2 cut(s) | 27, 307 |
| BseYI | CCCAGC | 1 cut(s) | 139 |
| BslFI | GGGAC | 1 cut(s) | 156 |
| BsmAI | GTCTC | 1 cut(s) | 428 |
| BsmBI | CGTCTC | 1 cut(s) | 428 |
| BsmFI | GGGAC | 1 cut(s) | 156 |
| Bsp119I | TTCGAA | 1 cut(s) | 134 |
| Bsp1407I | TGTACA | 1 cut(s) | 284 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| Bsp19I | CCATGG | 1 cut(s) | 390 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspLI | GGNNCC | 1 cut(s) | 39 |
| BspT104I | TTCGAA | 1 cut(s) | 134 |
| BsrGI | TGTACA | 1 cut(s) | 284 |
| BsrI | ACTGG | 2 cut(s) | 27, 307 |
| BssECI | CCNNGG | 2 cut(s) | 51, 390 |
| BssMI | GATC | 1 cut(s) | 172 |
| BssSI | CACGAG | 1 cut(s) | 228 |
| BssT1I | CCWWGG | 2 cut(s) | 51, 390 |
| Bst2BI | CACGAG | 1 cut(s) | 228 |
| Bst4CI | ACNGT | 1 cut(s) | 37 |
| Bst6I | CTCTTC | 1 cut(s) | 391 |
| BstAUI | TGTACA | 1 cut(s) | 284 |
| BstBI | TTCGAA | 1 cut(s) | 134 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstDSI | CCRYGG | 1 cut(s) | 390 |
| BstF5I | GGATG | 1 cut(s) | 72 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMAI | GTCTC | 1 cut(s) | 428 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 296 |
| BstV2I | GAAGAC | 1 cut(s) | 10 |
| BtgI | CCRYGG | 1 cut(s) | 390 |
| BtsCI | GGATG | 1 cut(s) | 72 |
| CaiI | CAGNNNCTG | 1 cut(s) | 302 |
| Csp6I | GTAC | 2 cut(s) | 33, 285 |
| CviAII | CATG | 2 cut(s) | 201, 391 |
| CviJI | RGCY | 7 cut(s) | 56, 139, 158, 290, 299, 336, 398 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 139, 158, 290, 299, 336, 398 |
| CviQI | GTAC | 2 cut(s) | 33, 285 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| Eam1104I | CTCTTC | 1 cut(s) | 391 |
| EarI | CTCTTC | 1 cut(s) | 391 |
| Eco130I | CCWWGG | 2 cut(s) | 51, 390 |
| Eco57I | CTGAAG | 1 cut(s) | 279 |
| EcoT14I | CCWWGG | 2 cut(s) | 51, 390 |
| ErhI | CCWWGG | 2 cut(s) | 51, 390 |
| Esp3I | CGTCTC | 1 cut(s) | 428 |
| FaeI | CATG | 2 cut(s) | 204, 394 |
| FaiI | YATR | 7 cut(s) | 99, 101, 202, 242, 331, 378, 392 |
| FaqI | GGGAC | 1 cut(s) | 156 |
| FatI | CATG | 2 cut(s) | 200, 390 |
| FauNDI | CATATG | 1 cut(s) | 99 |
| FokI | GGATG | 1 cut(s) | 59 |
| FspBI | CTAG | 1 cut(s) | 207 |
| GsaI | CCCAGC | 1 cut(s) | 143 |
| Hin1II | CATG | 2 cut(s) | 204, 394 |
| HinfI | GANTC | 3 cut(s) | 92, 307, 319 |
| HphI | GGTGA | 1 cut(s) | 164 |
| Hpy166II | GTNNAC | 1 cut(s) | 285 |
| Hpy188I | TCNGA | 1 cut(s) | 111 |
| Hpy188III | TCNNGA | 1 cut(s) | 427 |
| Hpy8I | GTNNAC | 1 cut(s) | 285 |
| HpyAV | CCTTC | 1 cut(s) | 157 |
| HpyCH4III | ACNGT | 1 cut(s) | 37 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 296 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Hsp92II | CATG | 2 cut(s) | 204, 394 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 6 cut(s) | 40, 125, 173, 195, 288, 329 |
| MaeI | CTAG | 1 cut(s) | 207 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 3 cut(s) | 10, 210, 378 |
| MluCI | AATT | 1 cut(s) | 147 |
| MnlI | CCTC | 2 cut(s) | 388, 425 |
| MroXI | GAANNNNTTC | 1 cut(s) | 214 |
| MslI | CAYNNNNRTG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 296 |
| NcoI | CCATGG | 1 cut(s) | 390 |
| NdeI | CATATG | 1 cut(s) | 99 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 2 cut(s) | 204, 394 |
| NlaIV | GGNNCC | 1 cut(s) | 39 |
| NspV | TTCGAA | 1 cut(s) | 134 |
| PdmI | GAANNNNTTC | 1 cut(s) | 214 |
| PfeI | GAWTC | 3 cut(s) | 92, 307, 319 |
| PspFI | CCCAGC | 1 cut(s) | 139 |
| PspN4I | GGNNCC | 1 cut(s) | 39 |
| PstNI | CAGNNNCTG | 1 cut(s) | 302 |
| RsaI | GTAC | 2 cut(s) | 34, 286 |
| RsaNI | GTAC | 2 cut(s) | 33, 285 |
| RseI | CAYNNNNRTG | 1 cut(s) | 81 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| SetI | ASST | 7 cut(s) | 18, 141, 168, 284, 292, 301, 338 |
| SfuI | TTCGAA | 1 cut(s) | 134 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 81 |
| SmlI | CTYRAG | 1 cut(s) | 425 |
| SmoI | CTYRAG | 1 cut(s) | 425 |
| Sse9I | AATT | 1 cut(s) | 147 |
| SspMI | CTAG | 1 cut(s) | 207 |
| StyI | CCWWGG | 2 cut(s) | 51, 390 |
| TaaI | ACNGT | 1 cut(s) | 37 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TaqI | TCGA | 1 cut(s) | 134 |
| TasI | AATT | 1 cut(s) | 147 |
| TatI | WGTACW | 1 cut(s) | 284 |
| TfiI | GAWTC | 3 cut(s) | 92, 307, 319 |
| TspGWI | ACGGA | 1 cut(s) | 30 |
| XmnI | GAANNNNTTC | 1 cut(s) | 214 |
| XspI | CTAG | 1 cut(s) | 207 |