Pentatricopeptide repeat-containing protein At1g06145-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0105281 |
| rosa_laevigata | RLG00000021148 |
| rosa_multiflora | Rmu_sc0000994.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00090650 Rroxscaffold_4G00302920 |
| rosa_samantha | Rh2CG439100 Rh7AG285600 Rh7CG304600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 483 |
| AfaI | GTAC | 1 cut(s) | 286 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| AhlI | ACTAGT | 1 cut(s) | 26 |
| AluBI | AGCT | 4 cut(s) | 139, 158, 299, 404 |
| AluI | AGCT | 4 cut(s) | 139, 158, 299, 404 |
| ApoI | RAATTY | 1 cut(s) | 483 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 167 |
| AsuHPI | GGTGA | 1 cut(s) | 350 |
| AsuII | TTCGAA | 1 cut(s) | 134 |
| BauI | CACGAG | 1 cut(s) | 394 |
| BbsI | GAAGAC | 1 cut(s) | 10 |
| BccI | CCATC | 2 cut(s) | 185, 386 |
| BceAI | ACGGC | 1 cut(s) | 337 |
| BclI | TGATCA | 2 cut(s) | 48, 408 |
| BcuI | ACTAGT | 1 cut(s) | 26 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BfmI | CTRYAG | 2 cut(s) | 294, 351 |
| BpiI | GAAGAC | 1 cut(s) | 10 |
| Bpu14I | TTCGAA | 1 cut(s) | 134 |
| BseMII | CTCAG | 3 cut(s) | 173, 174, 437 |
| BseYI | CCCAGC | 1 cut(s) | 139 |
| BsiSI | CCGG | 1 cut(s) | 41 |
| BslFI | GGGAC | 1 cut(s) | 156 |
| BsmFI | GGGAC | 1 cut(s) | 156 |
| BsmI | GAATGC | 1 cut(s) | 183 |
| Bsp119I | TTCGAA | 1 cut(s) | 134 |
| Bsp1407I | TGTACA | 1 cut(s) | 284 |
| Bsp143I | GATC | 4 cut(s) | 48, 315, 390, 408 |
| BspCNI | CTCAG | 3 cut(s) | 172, 175, 436 |
| BspMAI | CTGCAG | 1 cut(s) | 355 |
| BspT104I | TTCGAA | 1 cut(s) | 134 |
| BsrGI | TGTACA | 1 cut(s) | 284 |
| BssMI | GATC | 4 cut(s) | 48, 315, 390, 408 |
| BssSI | CACGAG | 1 cut(s) | 394 |
| Bst2BI | CACGAG | 1 cut(s) | 394 |
| Bst4CI | ACNGT | 1 cut(s) | 289 |
| BstAUI | TGTACA | 1 cut(s) | 284 |
| BstBI | TTCGAA | 1 cut(s) | 134 |
| BstDEI | CTNAG | 3 cut(s) | 159, 183, 423 |
| BstKTI | GATC | 4 cut(s) | 51, 318, 393, 411 |
| BstMBI | GATC | 4 cut(s) | 48, 315, 390, 408 |
| BstSFI | CTRYAG | 2 cut(s) | 294, 351 |
| BstV2I | GAAGAC | 1 cut(s) | 10 |
| BtsI | GCAGTG | 1 cut(s) | 459 |
| BtsIMutI | CAGTG | 2 cut(s) | 88, 459 |
| Csp6I | GTAC | 1 cut(s) | 285 |
| CviAII | CATG | 2 cut(s) | 230, 241 |
| CviJI | RGCY | 8 cut(s) | 44, 56, 139, 158, 299, 324, 404, 492 |
| CviKI_1 | RGCY | 8 cut(s) | 44, 56, 139, 158, 299, 324, 404, 492 |
| CviQI | GTAC | 1 cut(s) | 285 |
| DdeI | CTNAG | 3 cut(s) | 159, 183, 423 |
| DpnI | GATC | 4 cut(s) | 50, 317, 392, 410 |
| DpnII | GATC | 4 cut(s) | 48, 315, 390, 408 |
| EcoRI | GAATTC | 1 cut(s) | 483 |
| FaeI | CATG | 2 cut(s) | 233, 244 |
| FaqI | GGGAC | 1 cut(s) | 156 |
| FatI | CATG | 2 cut(s) | 229, 240 |
| FauNDI | CATATG | 1 cut(s) | 99 |
| FbaI | TGATCA | 2 cut(s) | 48, 408 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GsaI | CCCAGC | 1 cut(s) | 143 |
| HapII | CCGG | 1 cut(s) | 41 |
| Hin1II | CATG | 2 cut(s) | 233, 244 |
| HinfI | GANTC | 2 cut(s) | 92, 347 |
| HpaII | CCGG | 1 cut(s) | 41 |
| HphI | GGTGA | 1 cut(s) | 350 |
| Hpy166II | GTNNAC | 3 cut(s) | 204, 285, 399 |
| Hpy188I | TCNGA | 3 cut(s) | 111, 162, 426 |
| Hpy8I | GTNNAC | 3 cut(s) | 204, 285, 399 |
| Hpy99I | CGWCG | 1 cut(s) | 323 |
| HpyAV | CCTTC | 1 cut(s) | 157 |
| HpyCH4III | ACNGT | 1 cut(s) | 289 |
| HpyCH4IV | ACGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 1 cut(s) | 353 |
| HpyF3I | CTNAG | 3 cut(s) | 159, 183, 423 |
| HpySE526I | ACGT | 1 cut(s) | 35 |
| Hsp92II | CATG | 2 cut(s) | 233, 244 |
| Ksp22I | TGATCA | 2 cut(s) | 48, 408 |
| Kzo9I | GATC | 4 cut(s) | 48, 315, 390, 408 |
| LpnPI | CCDG | 4 cut(s) | 54, 125, 195, 367 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeII | ACGT | 1 cut(s) | 35 |
| MaeIII | GTNAC | 1 cut(s) | 289 |
| MalI | GATC | 4 cut(s) | 50, 317, 392, 410 |
| MboI | GATC | 4 cut(s) | 48, 315, 390, 408 |
| MboII | GAAGA | 2 cut(s) | 10, 210 |
| MfeI | CAATTG | 1 cut(s) | 412 |
| MluCI | AATT | 3 cut(s) | 147, 412, 483 |
| MlyI | GAGTC | 1 cut(s) | 356 |
| MnlI | CCTC | 2 cut(s) | 73, 462 |
| MroXI | GAANNNNTTC | 1 cut(s) | 167 |
| MseI | TTAA | 3 cut(s) | 366, 459, 477 |
| MslI | CAYNNNNRTG | 2 cut(s) | 81, 228 |
| MspI | CCGG | 1 cut(s) | 41 |
| MunI | CAATTG | 1 cut(s) | 412 |
| Mva1269I | GAATGC | 1 cut(s) | 183 |
| NdeI | CATATG | 1 cut(s) | 99 |
| NdeII | GATC | 4 cut(s) | 48, 315, 390, 408 |
| NlaIII | CATG | 2 cut(s) | 233, 244 |
| NspV | TTCGAA | 1 cut(s) | 134 |
| PctI | GAATGC | 1 cut(s) | 183 |
| PdmI | GAANNNNTTC | 1 cut(s) | 167 |
| PfeI | GAWTC | 1 cut(s) | 92 |
| PleI | GAGTC | 1 cut(s) | 355 |
| PpsI | GAGTC | 1 cut(s) | 355 |
| PspFI | CCCAGC | 1 cut(s) | 139 |
| PstI | CTGCAG | 1 cut(s) | 355 |
| RsaI | GTAC | 1 cut(s) | 286 |
| RsaNI | GTAC | 1 cut(s) | 285 |
| RseI | CAYNNNNRTG | 2 cut(s) | 81, 228 |
| SaqAI | TTAA | 3 cut(s) | 366, 459, 477 |
| Sau3AI | GATC | 4 cut(s) | 48, 315, 390, 408 |
| SchI | GAGTC | 1 cut(s) | 356 |
| SetI | ASST | 8 cut(s) | 38, 141, 160, 168, 284, 301, 406, 473 |
| SfcI | CTRYAG | 2 cut(s) | 294, 351 |
| SfuI | TTCGAA | 1 cut(s) | 134 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 81, 228 |
| SpeI | ACTAGT | 1 cut(s) | 26 |
| Sse9I | AATT | 3 cut(s) | 147, 412, 483 |
| SspMI | CTAG | 1 cut(s) | 27 |
| TaaI | ACNGT | 1 cut(s) | 289 |
| TaiI | ACGT | 1 cut(s) | 38 |
| TaqI | TCGA | 5 cut(s) | 65, 134, 175, 264, 318 |
| TasI | AATT | 3 cut(s) | 147, 412, 483 |
| TatI | WGTACW | 1 cut(s) | 284 |
| TfiI | GAWTC | 1 cut(s) | 92 |
| Tru1I | TTAA | 3 cut(s) | 366, 459, 477 |
| Tru9I | TTAA | 3 cut(s) | 366, 459, 477 |
| TscAI | CASTG | 2 cut(s) | 88, 459 |
| TspDTI | ATGAA | 1 cut(s) | 65 |
| TspRI | CASTG | 2 cut(s) | 88, 459 |
| XapI | RAATTY | 1 cut(s) | 483 |
| XmnI | GAANNNNTTC | 1 cut(s) | 167 |
| XspI | CTAG | 1 cut(s) | 27 |