No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g24961 |
| prunus_persica | Prupe.7G048800_v2.0.a1 Prupe.7G048900_v2.0.a1 |
| pyrus_communis | pycom07g14980 pycom12g07470 |
| rosa_chinensis | RchiOBHm_Chr2g0124691 |
| rosa_roxburghii | Rroxscaffold_2G00119750 |
| rosa_samantha | Rh2AG310800 Rh2BG319400 Rh2CG298100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 128 |
| Acc36I | ACCTGC | 1 cut(s) | 128 |
| AccII | CGCG | 1 cut(s) | 171 |
| AciI | CCGC | 5 cut(s) | 84, 126, 129, 169, 171 |
| AcyI | GRCGYC | 1 cut(s) | 63 |
| AfaI | GTAC | 1 cut(s) | 17 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 233 |
| AgsI | TTSAA | 3 cut(s) | 164, 179, 232 |
| AluBI | AGCT | 2 cut(s) | 145, 152 |
| AluI | AGCT | 2 cut(s) | 145, 152 |
| AoxI | GGCC | 1 cut(s) | 7 |
| ApeKI | GCWGC | 2 cut(s) | 77, 80 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 141, 173 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 8, 40 |
| BbvI | GCAGC | 2 cut(s) | 89, 92 |
| BfuAI | ACCTGC | 1 cut(s) | 128 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 92 |
| BisI | GCNGC | 4 cut(s) | 78, 81, 84, 129 |
| BlsI | GCNGC | 4 cut(s) | 79, 82, 85, 130 |
| BsaHI | GRCGYC | 1 cut(s) | 63 |
| BsaJI | CCNNGG | 1 cut(s) | 169 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 233 |
| BseDI | CCNNGG | 1 cut(s) | 169 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 233 |
| BseRI | GAGGAG | 2 cut(s) | 204, 207 |
| BseXI | GCAGC | 2 cut(s) | 89, 92 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| BshFI | GGCC | 1 cut(s) | 9 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 233 |
| BsnI | GGCC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 133 |
| BspACI | CCGC | 5 cut(s) | 84, 126, 129, 169, 171 |
| BspANI | GGCC | 1 cut(s) | 9 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BspMI | ACCTGC | 1 cut(s) | 128 |
| BspQI | GCTCTTC | 1 cut(s) | 102 |
| BssECI | CCNNGG | 1 cut(s) | 169 |
| BssMI | GATC | 1 cut(s) | 133 |
| BssNI | GRCGYC | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 3 cut(s) | 57, 91, 202 |
| Bst6I | CTCTTC | 2 cut(s) | 102, 225 |
| BstACI | GRCGYC | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 1 cut(s) | 7 |
| BstDSI | CCRYGG | 1 cut(s) | 169 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstKTI | GATC | 1 cut(s) | 136 |
| BstMBI | GATC | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 83, 92 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 2 cut(s) | 89, 92 |
| BsuRI | GGCC | 1 cut(s) | 9 |
| BtgI | CCRYGG | 1 cut(s) | 169 |
| BtsIMutI | CAGTG | 3 cut(s) | 30, 87, 198 |
| BveI | ACCTGC | 1 cut(s) | 128 |
| Cac8I | GCNNGC | 1 cut(s) | 7 |
| Cfr42I | CCGCGG | 1 cut(s) | 172 |
| CseI | GACGC | 1 cut(s) | 71 |
| Csp6I | GTAC | 1 cut(s) | 16 |
| CviJI | RGCY | 5 cut(s) | 9, 83, 95, 145, 152 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 83, 95, 145, 152 |
| CviQI | GTAC | 1 cut(s) | 16 |
| DpnI | GATC | 1 cut(s) | 135 |
| DpnII | GATC | 1 cut(s) | 133 |
| Eam1104I | CTCTTC | 2 cut(s) | 102, 225 |
| EarI | CTCTTC | 2 cut(s) | 102, 225 |
| EciI | GGCGGA | 1 cut(s) | 115 |
| Eco147I | AGGCCT | 1 cut(s) | 9 |
| FaiI | YATR | 1 cut(s) | 185 |
| Fnu4HI | GCNGC | 4 cut(s) | 78, 81, 84, 129 |
| Fsp4HI | GCNGC | 4 cut(s) | 78, 81, 84, 129 |
| GluI | GCNGC | 4 cut(s) | 78, 81, 84, 129 |
| HaeIII | GGCC | 1 cut(s) | 9 |
| HgaI | GACGC | 1 cut(s) | 71 |
| Hin1I | GRCGYC | 1 cut(s) | 63 |
| Hpy166II | GTNNAC | 1 cut(s) | 53 |
| Hpy188III | TCNNGA | 1 cut(s) | 190 |
| Hpy8I | GTNNAC | 1 cut(s) | 53 |
| HpyAV | CCTTC | 1 cut(s) | 20 |
| HpyCH4III | ACNGT | 3 cut(s) | 57, 91, 202 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 83, 92 |
| Hsp92I | GRCGYC | 1 cut(s) | 63 |
| KspI | CCGCGG | 1 cut(s) | 172 |
| Kzo9I | GATC | 1 cut(s) | 133 |
| LguI | GCTCTTC | 1 cut(s) | 102 |
| LmnI | GCTCC | 1 cut(s) | 128 |
| LpnPI | CCDG | 1 cut(s) | 133 |
| Lsp1109I | GCAGC | 2 cut(s) | 89, 92 |
| MalI | GATC | 1 cut(s) | 135 |
| MboI | GATC | 1 cut(s) | 133 |
| MboII | GAAGA | 3 cut(s) | 16, 89, 212 |
| MmeI | TCCRAC | 1 cut(s) | 163 |
| MnlI | CCTC | 6 cut(s) | 57, 111, 116, 225, 228, 234 |
| MspA1I | CMGCKG | 1 cut(s) | 171 |
| MvnI | CGCG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 83, 92 |
| NdeII | GATC | 1 cut(s) | 133 |
| PaqCI | CACCTGC | 1 cut(s) | 128 |
| PceI | AGGCCT | 1 cut(s) | 9 |
| PciSI | GCTCTTC | 1 cut(s) | 102 |
| PkrI | GCNGC | 4 cut(s) | 79, 82, 85, 130 |
| RsaI | GTAC | 1 cut(s) | 17 |
| RsaNI | GTAC | 1 cut(s) | 16 |
| SacII | CCGCGG | 1 cut(s) | 172 |
| SapI | GCTCTTC | 1 cut(s) | 102 |
| SatI | GCNGC | 4 cut(s) | 78, 81, 84, 129 |
| Sau3AI | GATC | 1 cut(s) | 133 |
| SetI | ASST | 3 cut(s) | 122, 147, 154 |
| Sfr303I | CCGCGG | 1 cut(s) | 172 |
| SgeI | CNNG | 7 cut(s) | 18, 60, 132, 167, 182, 191, 202 |
| SgrBI | CCGCGG | 1 cut(s) | 172 |
| SseBI | AGGCCT | 1 cut(s) | 9 |
| SsiI | CCGC | 5 cut(s) | 84, 126, 129, 169, 171 |
| StuI | AGGCCT | 1 cut(s) | 9 |
| TaaI | ACNGT | 3 cut(s) | 57, 91, 202 |
| TatI | WGTACW | 1 cut(s) | 15 |
| TauI | GCSGC | 2 cut(s) | 86, 131 |
| TscAI | CASTG | 3 cut(s) | 37, 94, 205 |
| TseI | GCWGC | 2 cut(s) | 77, 80 |
| TspRI | CASTG | 3 cut(s) | 37, 94, 205 |