RchiOBHm_Chr2g0159711
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
75738762 .. 75740986
2225 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52827

Sequence Viewer

Length: 222 bp
ATGTCAGAGCCATCAGCAGAACTAATGCATCATGTTGGACATAAGTTCCATGAGTTATTTCAGATAAGACAAGGATGCTACGCGGATCTTCCTGCTGCAAAGATCTCAGAAATGATGAAATCTAACAGTTTAGATGTATGTTGTCGATGTACCTGGAAACAAAATCAGGTTCTTTTTTGTGTTCTCATCAAATTAAGTTGTTATTCTTTGAAAATCTGGTAA

Protein Analysis

73

Amino Acids

8.48

Weight (kDa)

8.26

Isoelectric Point (pI)

47.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019886)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 83
AciI CCGC 1 cut(s) 83
AclWI GGATC 1 cut(s) 93
AfaI GTAC 1 cut(s) 151
AgsI TTSAA 1 cut(s) 211
AjnI CCWGG 1 cut(s) 152
AlwI GGATC 1 cut(s) 93
ApeKI GCWGC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 82
BccI CCATC 1 cut(s) 19
BciT130I CCWGG 1 cut(s) 154
BglII AGATCT 1 cut(s) 102
BisI GCNGC 1 cut(s) 96
BlsI GCNGC 1 cut(s) 97
Bme1390I CCNGG 1 cut(s) 154
BmrFI CCNGG 1 cut(s) 154
BmsI GCATC 2 cut(s) 37, 65
BseBI CCWGG 1 cut(s) 154
BseGI GGATG 1 cut(s) 80
BseMII CTCAG 1 cut(s) 120
BseXI GCAGC 1 cut(s) 82
Bsh1236I CGCG 1 cut(s) 83
Bsp143I GATC 2 cut(s) 85, 102
BspACI CCGC 1 cut(s) 83
BspCNI CTCAG 1 cut(s) 119
BspFNI CGCG 1 cut(s) 83
BspPI GGATC 1 cut(s) 93
BssMI GATC 2 cut(s) 85, 102
Bst2UI CCWGG 1 cut(s) 154
Bst4CI ACNGT 1 cut(s) 128
BstDEI CTNAG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 80
BstFNI CGCG 1 cut(s) 83
BstKTI GATC 2 cut(s) 88, 105
BstMBI GATC 2 cut(s) 85, 102
BstNI CCWGG 1 cut(s) 154
BstSCI CCNGG 1 cut(s) 152
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 1 cut(s) 82
BstX2I RGATCY 2 cut(s) 85, 102
BstYI RGATCY 2 cut(s) 85, 102
BtsCI GGATG 1 cut(s) 80
Csp6I GTAC 1 cut(s) 150
CviAII CATG 2 cut(s) 32, 50
CviJI RGCY 1 cut(s) 10
CviKI_1 RGCY 1 cut(s) 10
CviQI GTAC 1 cut(s) 150
DdeI CTNAG 1 cut(s) 106
DpnI GATC 2 cut(s) 87, 104
DpnII GATC 2 cut(s) 85, 102
EcoRII CCWGG 1 cut(s) 152
EcoT22I ATGCAT 1 cut(s) 30
FaeI CATG 2 cut(s) 35, 53
FaiI YATR 4 cut(s) 33, 42, 51, 139
FatI CATG 2 cut(s) 31, 49
Fnu4HI GCNGC 1 cut(s) 96
FokI GGATG 1 cut(s) 87
Fsp4HI GCNGC 1 cut(s) 96
GluI GCNGC 1 cut(s) 96
Hin1II CATG 2 cut(s) 35, 53
Hpy188I TCNGA 3 cut(s) 7, 63, 109
HpyCH4III ACNGT 1 cut(s) 128
HpyCH4V TGCA 2 cut(s) 28, 98
HpyF3I CTNAG 1 cut(s) 106
Hsp92II CATG 2 cut(s) 35, 53
Kzo9I GATC 2 cut(s) 85, 102
LpnPI CCDG 5 cut(s) 105, 139, 152, 166, 202
Lsp1109I GCAGC 1 cut(s) 82
LweI GCATC 2 cut(s) 37, 65
MalI GATC 2 cut(s) 87, 104
MboI GATC 2 cut(s) 85, 102
MboII GAAGA 1 cut(s) 80
MflI RGATCY 2 cut(s) 85, 102
MluCI AATT 1 cut(s) 191
MmeI TCCRAC 1 cut(s) 16
Mph1103I ATGCAT 1 cut(s) 30
MseI TTAA 1 cut(s) 194
MspR9I CCNGG 1 cut(s) 154
MvaI CCWGG 1 cut(s) 154
MvnI CGCG 1 cut(s) 83
NdeII GATC 2 cut(s) 85, 102
NlaIII CATG 2 cut(s) 35, 53
NsiI ATGCAT 1 cut(s) 30
PkrI GCNGC 1 cut(s) 97
Psp6I CCWGG 1 cut(s) 152
PspGI CCWGG 1 cut(s) 152
PsuI RGATCY 2 cut(s) 85, 102
RsaI GTAC 1 cut(s) 151
RsaNI GTAC 1 cut(s) 150
SaqAI TTAA 1 cut(s) 194
SatI GCNGC 1 cut(s) 96
Sau3AI GATC 2 cut(s) 85, 102
ScrFI CCNGG 1 cut(s) 154
SetI ASST 2 cut(s) 155, 171
SfaNI GCATC 2 cut(s) 37, 65
SgeI CNNG 8 cut(s) 44, 62, 83, 94, 104, 165, 166, 179
Sse9I AATT 1 cut(s) 191
SsiI CCGC 1 cut(s) 83
StyD4I CCNGG 1 cut(s) 152
TaaI ACNGT 1 cut(s) 128
TaqI TCGA 1 cut(s) 145
TasI AATT 1 cut(s) 191
Tru1I TTAA 1 cut(s) 194
Tru9I TTAA 1 cut(s) 194
TseI GCWGC 1 cut(s) 95
TspDTI ATGAA 1 cut(s) 131
Zsp2I ATGCAT 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.