DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321571 RchiOBHm_Chr1g0328931 RchiOBHm_Chr2g0172481 |
| rosa_multiflora | Rmu_sc0003413.1_g000021 Rmu_sc0033684.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00115020 |
| rosa_samantha | Rh1AG052900 Rh3AG281200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 149 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AcuI | CTGAAG | 1 cut(s) | 150 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 101 |
| AgsI | TTSAA | 2 cut(s) | 65, 72 |
| AluBI | AGCT | 1 cut(s) | 183 |
| AluI | AGCT | 1 cut(s) | 183 |
| AlwI | GGATC | 1 cut(s) | 149 |
| Ama87I | CYCGRG | 1 cut(s) | 75 |
| AoxI | GGCC | 1 cut(s) | 57 |
| ApeKI | GCWGC | 1 cut(s) | 46 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 36 |
| AspS9I | GGNCC | 1 cut(s) | 58 |
| AvaI | CYCGRG | 1 cut(s) | 75 |
| BbvI | GCAGC | 1 cut(s) | 33 |
| BisI | GCNGC | 1 cut(s) | 47 |
| BlsI | GCNGC | 1 cut(s) | 48 |
| BmeT110I | CYCGRG | 1 cut(s) | 75 |
| BmgT120I | GGNCC | 1 cut(s) | 58 |
| BpmI | CTGGAG | 1 cut(s) | 96 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 101 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BseRI | GAGGAG | 1 cut(s) | 99 |
| BseXI | GCAGC | 1 cut(s) | 33 |
| BshFI | GGCC | 1 cut(s) | 59 |
| BsiHKCI | CYCGRG | 1 cut(s) | 75 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BsnI | GGCC | 1 cut(s) | 59 |
| BsoBI | CYCGRG | 1 cut(s) | 75 |
| Bsp143I | GATC | 1 cut(s) | 154 |
| BspANI | GGCC | 1 cut(s) | 59 |
| BspPI | GGATC | 1 cut(s) | 149 |
| BssMI | GATC | 1 cut(s) | 154 |
| Bst4CI | ACNGT | 1 cut(s) | 120 |
| BstDEI | CTNAG | 1 cut(s) | 41 |
| BstKTI | GATC | 1 cut(s) | 157 |
| BstMBI | GATC | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 43 |
| BstV1I | GCAGC | 1 cut(s) | 33 |
| BsuRI | GGCC | 1 cut(s) | 59 |
| BtsIMutI | CAGTG | 1 cut(s) | 125 |
| Cfr13I | GGNCC | 1 cut(s) | 58 |
| CviJI | RGCY | 4 cut(s) | 37, 46, 59, 183 |
| CviKI_1 | RGCY | 4 cut(s) | 37, 46, 59, 183 |
| DdeI | CTNAG | 1 cut(s) | 41 |
| DpnI | GATC | 1 cut(s) | 156 |
| DpnII | GATC | 1 cut(s) | 154 |
| Eco57I | CTGAAG | 1 cut(s) | 150 |
| Eco88I | CYCGRG | 1 cut(s) | 75 |
| EcoO109I | RGGNCCY | 1 cut(s) | 58 |
| FaiI | YATR | 1 cut(s) | 174 |
| Fnu4HI | GCNGC | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 1 cut(s) | 47 |
| GluI | GCNGC | 1 cut(s) | 47 |
| GsuI | CTGGAG | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 59 |
| HinfI | GANTC | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 3 cut(s) | 154, 169, 188 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 113 |
| HpyAV | CCTTC | 1 cut(s) | 24 |
| HpyCH4III | ACNGT | 1 cut(s) | 120 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 43 |
| HpyF3I | CTNAG | 1 cut(s) | 41 |
| Kzo9I | GATC | 1 cut(s) | 154 |
| LmnI | GCTCC | 1 cut(s) | 180 |
| LpnPI | CCDG | 4 cut(s) | 68, 86, 108, 126 |
| Lsp1109I | GCAGC | 1 cut(s) | 33 |
| MalI | GATC | 1 cut(s) | 156 |
| MboI | GATC | 1 cut(s) | 154 |
| MboII | GAAGA | 1 cut(s) | 156 |
| MluCI | AATT | 2 cut(s) | 67, 148 |
| MnlI | CCTC | 4 cut(s) | 49, 120, 138, 169 |
| MroXI | GAANNNNTTC | 1 cut(s) | 36 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 43 |
| NdeII | GATC | 1 cut(s) | 154 |
| PaeR7I | CTCGAG | 1 cut(s) | 75 |
| PdmI | GAANNNNTTC | 1 cut(s) | 36 |
| PfeI | GAWTC | 1 cut(s) | 86 |
| PkrI | GCNGC | 1 cut(s) | 48 |
| PspPI | GGNCC | 1 cut(s) | 58 |
| SatI | GCNGC | 1 cut(s) | 47 |
| Sau3AI | GATC | 1 cut(s) | 154 |
| Sau96I | GGNCC | 1 cut(s) | 58 |
| SetI | ASST | 1 cut(s) | 185 |
| Sfr274I | CTCGAG | 1 cut(s) | 75 |
| SgeI | CNNG | 8 cut(s) | 22, 74, 87, 89, 95, 107, 113, 125 |
| SlaI | CTCGAG | 1 cut(s) | 75 |
| SmlI | CTYRAG | 1 cut(s) | 75 |
| SmoI | CTYRAG | 1 cut(s) | 75 |
| Sse9I | AATT | 2 cut(s) | 67, 148 |
| TaaI | ACNGT | 1 cut(s) | 120 |
| TaqI | TCGA | 1 cut(s) | 76 |
| TasI | AATT | 2 cut(s) | 67, 148 |
| TfiI | GAWTC | 1 cut(s) | 86 |
| TscAI | CASTG | 1 cut(s) | 125 |
| TseI | GCWGC | 1 cut(s) | 46 |
| TspRI | CASTG | 1 cut(s) | 125 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XhoI | CTCGAG | 1 cut(s) | 75 |
| XmnI | GAANNNNTTC | 1 cut(s) | 36 |