Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008022

Physical Location & Seq

Genomic Coordinates Forward (+)

88509204 .. 88524798

Gene Structure 15595 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54378

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3039 bp

ATGGAATTGCAAATGAAGGTGGCGCAGGCAGTTCACGTCCTGAATCACGATACAGAGTCGTGCAACCGCGTGGCAGCTAATCAGTGGCTGGTTCAGTTTCAGCAGACTGACGCCGCTTGGGCCGTCGCCACCTCCATCCTCACCTCCGATTTTCACCATTCTTTCGGCTCCAATTACGAGGTCGAGTTCTTTGCTGCCCAGATTCTTAAACGAAAGATCCAAAATGAGGGCAGTTACCTGCAGTCAGGAGCTAAAGATGCTTTGCTAAATGCCCTTCTTCTGGCTGCCAAAAGATTTAGTTCAGGCCCTCACCAGCTTTTAACCCAAATCTGCCTTGCACTCTCGGCACTTTTACTGCGTGCTGTTGAGCATGGAAAACCTGTTGAGCAACTCTTTTATAGCCTCCAGAATCTGCAGACCCAGGTTGATGGCAATGTTGCTGTTATGGAGATGCTTACTGTTTTACCGGAAGAAGTTTTAGATTCCCAAAATACTGACTCGAAAATAAGTTTAACCGACAGAAGCCAGTATGGTCAAGAGCTTCTCTCGCACACACCTACGGTTCTTGAGTTCCTATTGCAACAATCTGAGAAAAGGTTTGATAGTGGTATACAACAACATGAAAGCAACAGAAAAATTCTGCGTTGCTTACTAAGTTGGGTTCGAGCTGGGTGCTTCTCGGAGATTCCCCAGGGATTACTACCAGCACATCCACTTCTTAATTTTGTCTTCAGTTCTTTGCAGGTGCCATCTTCATTTGATCTGGCAATTGAAGTTCTCATTGAGCTTGTGAGTCGACATGAGGGGCTACCCCAGGTTTTGTTATGTAGGGTGCATTTCATTAAAGAAGTTCTACTTCTACCAGCTCTCAGTAATGGAGACGAAAAAATAGTAGGTGGTCTTGCGTGCTTATTGTCAGAGATTGGGCAGGCTGCTCCATCTCTGATAGTAGAAGCAAGTGTTGAAGCCCTTGCACTGGCAGATGCACTTTTAAGCTGTGTGACATTTCCAAGTGAGGACTGGGAGATAGCAGACTCAACTTTGCAATTTTGGTCTGGGTTAGCAAGCTATATTCTTGGCCTTGATGAGAACAGTACAAATCAAAGGAAGCAAGTGGAAGACATGTTTTTCCCTGTATTTTCAGCACTACTTGACGCAGTTTTGTTACGTGCCCAGGTAGATGATTCTATGTTCAATGACGACCAAGGAACACCGGAGCTGCCTGATGGACTTGTCTACTTTAGAACGAATCTTGTTGAACTGTTGGTGGATATTTGTCAGCTTTTAAGATCTGCTACATTTGTACAGAAGCTTTTCTTTGGTGGTTGGGCCTCTGCAAATGCACCAATAGCTTGGAAGGATGTGGAAACCAAGTTGTTTGCTCTTAATGTGGTCGCTGAGGTAATCCTACAGGAAGGCCAAATCTTTGATTTCTCGGTCATTATGCAGTTAGTGACGGTTTTGTCCACTAGGCCGTTGGATGAACTGAAGGGCATCATGTGCATTGTGCATAGATCTCTTGCAGATGTTGTTGGCTCCTATTCTAAGTGGATCTCTGCTTTTCAAACAAATGCTAGACCCTTACTGTTATTTCTTGCTGCTGGAATATCAGAACCCTTGTCCTCGAGTTCTTGTGCATCTGCATTGCGTAAAGTTTGTGAAGATGCTTCTGCAGTGATGTATGAACCTTCAAATTTGGAGATTTTGATGTGGATAGGAGAGGGTCTGGAGAAGAGTCATTTACCTTTGGAAGATGAGGAAGAAGTTGTTAGTGCAGTTAGTCTGATCCTTGGTTCTATTAATAACAAAGAATTAAAGAGCAACTTATTGGCTAGATTGCTTTCTTCTAGCTTTGAAGCTATTGGGAAACTTGTTGATAAAGATAGCAGCCATTGCCTAAGACAAAATCCTGCTACCTATACACAAATTTTGAACTCTGGTGCAAGAGGGCTTTACAGGATGGGAACTGTATTCAGCCATCTTGCAACATCCGTGCAGAGTGTATCTTCTGGAGATGGTTGTATGCTTGCGCTATTGCAAGCGTTTTGGCCAATGCTAGAGAAGCTTTTCAGGTCTGAGCACATGGAGAATGGTAATTTATCAACCGCAGCTTGCCGAGCACTTACCCAAGCAATTCAGTCATCAGGCGAACACTTCTTAAGGCTACTGCCTAAAGTACTAGATTGCCTATCAACAAATTATGTGTCCTTCCAAAGTCATGAATGCTACATAAGAACTGCATCTGTTGTGATTGAAGAATTTGGTCACAAAGAAGAGTATGGAGCTTTATTTGTCACTACTTTGGAGAGATTTACGCATGCTGCATCGGTAATGGCTCTTAATTCTTCATATATATGTGACCAAGAGCCTGATCTAGTAGAGGCATACACAAATTTTGCATCCACATATGTTCGCGGAACTCGTAAGGAAGTAGTGGCTGCATCTGGTACCCTTCTTGAAATTTCCTTTCAAAAGGCAGCTATATGCTGCACAGCTATGCATCGTGGAGCAGCACTTGCATCCATGTCATACTTATCTTGTTTTTTGGAGGTGAGCCTGGCGTCTTTGTTGGATTCCATGTCTTGTATTCCTGAAGGGTCATTCAGTGCAATGGCCATTCAAGTCATATCCCACAGTGGGGAGGGACTTGTATCAAATCTGGTTTATGCTTTACTTGGTGTTTCAGCAATGTCACGGGTTCACAAATGTGCCACTATTTTGCAACAATTGGCAGCAATATGCAGTTTAAGTGAGAGCACAACCGGCAAGGCTATTCTTTGTTGGGAATCTTTGCATGGATGGTTGCAGTCAGCGGTCCAGGCTCTTCCTGCTGAATACCTGAAGCAAGGGGAACTTGAAACTTTAGTGCCGGTTTGGTCTAAGGCCCTTGCCGGTGCAGCCTCAGATTATATCCAGAGCAGAAGTTGTGATGGAGGGCATAACAATTATGGTCACATGCAAGGGAAAGGTGGAAGAGTTTTGAAGCGTTTAGTCCGTGAATTTGCTGATAGCCACCGCAATATTCCAAACTTGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0007154 GO:0007165 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0023052 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0038023 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060089 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xpo1

Protein Analysis

1012

Amino Acids

110.91

Weight (kDa)

5.2

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	104 - 260	5.4e-19	Exportin 1-like protein
TPR_TNPO3_IPO13_2nd	PF24138	294 - 387	1.5e-07	Transportin-3/Importin-13 second TPR domain
TPR_TNPO3_IPO13_4th	PF24139	677 - 773	1.5e-08	Transportin-3/Importin-13 fourth TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12930
fragaria_vesca	FvH4_6g54490 FvH4_6g54490 FvH4_6g54490 FvH4_6g54490 FvH4_6g54490
malus_domestica	MD09G1000300.v1.1
prunus_persica	Prupe.3G316100_v2.0.a1 Prupe.3G316100_v2.0.a1 Prupe.3G316100_v2.0.a1 Prupe.3G316100_v2.0.a1 Prupe.3G316100_v2.0.a1 Prupe.3G316100_v2.0.a1
pyrus_communis	pycom111g00020
rosa_chinensis	RchiOBHm_Chr2g0176781
rosa_multiflora	Rmu_sc0007886.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076140
rosa_rugosa	Rorug02G0599400.1 Rorug02G0599500.1
rosa_samantha	Rh2AG676200 Rh2BG687200 Rh2CG650800 Rh2DG701500
rosa_wichuraiana	Rw2G055480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	733
AasI	GACNNNNNNGTC	1 cut(s)	1462
Acc36I	ACCTGC	2 cut(s)	246, 733
Acc65I	GGTACC	1 cut(s)	2447
AccB1I	GGYRCC	2 cut(s)	745, 2447
AccI	GTMKAC	3 cut(s)	610, 796, 1236
AccII	CGCG	2 cut(s)	69, 2415
AciI	CCGC	6 cut(s)	67, 114, 2106, 2415, 2813, 3016
AclWI	GGATC	3 cut(s)	211, 1559, 1780
AcoI	YGGCCR	2 cut(s)	2048, 2613
AcsI	RAATTY	7 cut(s)	636, 1693, 1926, 2258, 2392, 2460, 2999
AcuI	CTGAAG	4 cut(s)	715, 1508, 2613, 2861
AcyI	GRCGYC	2 cut(s)	111, 2561
AfaI	GTAC	4 cut(s)	1096, 1305, 2178, 2449
AfiI	CCNNNNNNNGG	5 cut(s)	226, 280, 976, 2637, 2638
AflII	CTTAAG	1 cut(s)	2158
AflIII	ACRYGT	1 cut(s)	1122
AjiI	CACGTC	1 cut(s)	37
AjnI	CCWGG	6 cut(s)	420, 690, 813, 1173, 2556, 2817
AleI	CACNNNNGTG	1 cut(s)	2706
Alw21I	GWGCWC	3 cut(s)	2082, 2122, 2759
Alw26I	GTCTC	1 cut(s)	873
AlwI	GGATC	3 cut(s)	211, 1559, 1780
AlwNI	CAGNNNCTG	2 cut(s)	88, 412
Ama87I	CYCGRG	1 cut(s)	1624
AoxI	GGCC	9 cut(s)	120, 304, 1078, 1329, 1417, 1472, 2048, 2613, 2883
ApoI	RAATTY	7 cut(s)	636, 1693, 1926, 2258, 2392, 2460, 2999
ArsI	GACNNNNNNTTYG	2 cut(s)	2189, 2221
AseI	ATTAAT	1 cut(s)	1800
Asp700I	GAANNNNTTC	2 cut(s)	1313, 2066
Asp718I	GGTACC	1 cut(s)	2447
AspLEI	GCGC	2 cut(s)	25, 2032
AspS9I	GGNCC	5 cut(s)	120, 305, 1329, 2815, 2884
AsuHPI	GGTGA	4 cut(s)	133, 146, 302, 2563
AvaI	CYCGRG	1 cut(s)	1624
AvaII	GGWCC	1 cut(s)	2815
BaeGI	GKGCMC	1 cut(s)	1174
BalI	TGGCCA	2 cut(s)	2050, 2615
BanI	GGYRCC	2 cut(s)	745, 2447
BbsI	GAAGAC	2 cut(s)	721, 1125
Bbv12I	GWGCWC	3 cut(s)	2082, 2122, 2759
BbvCI	CCTCAGC	1 cut(s)	1398
BceAI	ACGGC	2 cut(s)	107, 1459
BcgI	CGANNNNNNTGC	4 cut(s)	173, 207, 654, 688
BciT130I	CCWGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
BcoDI	GTCTC	1 cut(s)	873
BfaI	CTAG	7 cut(s)	1470, 1575, 1833, 1848, 2057, 2180, 2375
BfmI	CTRYAG	4 cut(s)	239, 413, 1409, 1671
BfrI	CTTAAG	1 cut(s)	2158
BfuAI	ACCTGC	2 cut(s)	246, 733
BglI	GCCNNNNNGGC	1 cut(s)	119
BglII	AGATCT	2 cut(s)	1289, 1514
BmcAI	AGTACT	1 cut(s)	2178
Bme1390I	CCNGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
Bme18I	GGWCC	1 cut(s)	2815
BmeT110I	CYCGRG	1 cut(s)	1624
BmgBI	CACGTC	1 cut(s)	37
BmgT120I	GGNCC	5 cut(s)	120, 305, 1329, 2815, 2884
BmiI	GGNNCC	4 cut(s)	169, 747, 1537, 2449
BmrFI	CCNGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
BmrI	ACTGGG	1 cut(s)	1030
BmuI	ACTGGG	1 cut(s)	1030
BpiI	GAAGAC	2 cut(s)	721, 1125
BplI	GAGNNNNNCTC	2 cut(s)	530, 562
BpmI	CTGGAG	3 cut(s)	389, 1748, 2031
Bpu10I	CCTNAGC	1 cut(s)	1398
BpuEI	CTTGAG	1 cut(s)	587
BsaAI	YACGTR	1 cut(s)	1169
BsaHI	GRCGYC	2 cut(s)	111, 2561
BsaJI	CCNNGG	7 cut(s)	420, 690, 691, 813, 1173, 1204, 1789
BsaWI	WCCGGW	2 cut(s)	466, 1213
Bsc4I	CCNNNNNNNGG	5 cut(s)	226, 280, 976, 2637, 2638
Bse118I	RCCGGY	3 cut(s)	2762, 2869, 2891
Bse1I	ACTGG	3 cut(s)	526, 981, 1025
Bse3DI	GCAATG	5 cut(s)	439, 1643, 1891, 2616, 2694
BseBI	CCWGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
BseDI	CCNNGG	7 cut(s)	420, 690, 691, 813, 1173, 1204, 1789
BseGI	GGATG	9 cut(s)	135, 709, 1366, 1486, 1965, 1988, 2399, 2519, 2804
BseLI	CCNNNNNNNGG	5 cut(s)	226, 280, 976, 2637, 2638
BseMI	GCAATG	5 cut(s)	439, 1643, 1891, 2616, 2694
BseMII	CTCAG	5 cut(s)	579, 883, 1389, 2067, 2916
BseNI	ACTGG	3 cut(s)	526, 981, 1025
BseSI	GKGCMC	1 cut(s)	1174
BseYI	CCCAGC	1 cut(s)	668
BsgI	GTGCAG	4 cut(s)	1794, 2015, 2473, 2916
Bsh1236I	CGCG	2 cut(s)	69, 2415
BshFI	GGCC	9 cut(s)	122, 306, 1080, 1331, 1419, 1474, 2050, 2615, 2885
BshNI	GGYRCC	2 cut(s)	745, 2447
BsiHKAI	GWGCWC	3 cut(s)	2082, 2122, 2759
BsiHKCI	CYCGRG	1 cut(s)	1624
BsiSI	CCGG	5 cut(s)	467, 1214, 2763, 2870, 2892
BslFI	GGGAC	1 cut(s)	2658
BslI	CCNNNNNNNGG	5 cut(s)	226, 280, 976, 2637, 2638
BsmAI	GTCTC	1 cut(s)	873
BsmBI	CGTCTC	1 cut(s)	873
BsmFI	GGGAC	1 cut(s)	2658
BsmI	GAATGC	1 cut(s)	2228
BsnI	GGCC	9 cut(s)	122, 306, 1080, 1331, 1419, 1474, 2050, 2615, 2885
BsoBI	CYCGRG	1 cut(s)	1624
Bsp1286I	GDGCHC	4 cut(s)	1174, 2082, 2122, 2759
Bsp1407I	TGTACA	1 cut(s)	1303
Bsp143I	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
BspACI	CCGC	6 cut(s)	67, 114, 2106, 2415, 2813, 3016
BspANI	GGCC	9 cut(s)	122, 306, 1080, 1331, 1419, 1474, 2050, 2615, 2885
BspCNI	CTCAG	5 cut(s)	580, 882, 1390, 2068, 2915
BspFNI	CGCG	2 cut(s)	69, 2415
BspHI	TCATGA	1 cut(s)	2218
BspLI	GGNNCC	4 cut(s)	169, 747, 1537, 2449
BspMAI	CTGCAG	3 cut(s)	243, 417, 1675
BspMI	ACCTGC	2 cut(s)	246, 733
BspPI	GGATC	3 cut(s)	211, 1559, 1780
BspQI	GCTCTTC	1 cut(s)	2829
BspT107I	GGYRCC	2 cut(s)	745, 2447
BspTI	CTTAAG	1 cut(s)	2158
BsrDI	GCAATG	5 cut(s)	439, 1643, 1891, 2616, 2694
BsrFI	RCCGGY	3 cut(s)	2762, 2869, 2891
BsrGI	TGTACA	1 cut(s)	1303
BsrI	ACTGG	3 cut(s)	526, 981, 1025
BssAI	RCCGGY	3 cut(s)	2762, 2869, 2891
BssECI	CCNNGG	7 cut(s)	420, 690, 691, 813, 1173, 1204, 1789
BssMI	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
BssNAI	GTATAC	1 cut(s)	611
BssNI	GRCGYC	2 cut(s)	111, 2561
BssT1I	CCWWGG	2 cut(s)	1204, 1789
Bst1107I	GTATAC	1 cut(s)	611
Bst2UI	CCWGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
Bst4CI	ACNGT	8 cut(s)	460, 562, 1094, 1263, 1459, 1587, 1969, 2636
Bst6I	CTCTTC	4 cut(s)	1727, 2268, 2829, 2968
BstACI	GRCGYC	2 cut(s)	111, 2561
BstAFI	CTTAAG	1 cut(s)	2158
BstAPI	GCANNNNNTGC	3 cut(s)	1500, 1893, 2516
BstAUI	TGTACA	1 cut(s)	1303
BstBAI	YACGTR	1 cut(s)	1169
BstC8I	GCNNGC	9 cut(s)	27, 360, 907, 930, 1066, 2028, 2040, 2113, 2319
BstDEI	CTNAG	9 cut(s)	588, 653, 869, 1398, 1545, 1898, 2076, 2880, 2902
BstF5I	GGATG	9 cut(s)	135, 709, 1366, 1486, 1965, 1988, 2399, 2519, 2804
BstFNI	CGCG	2 cut(s)	69, 2415
BstHHI	GCGC	2 cut(s)	25, 2032
BstKTI	GATC	7 cut(s)	219, 763, 1292, 1517, 1554, 1788, 2374
BstMAI	GTCTC	1 cut(s)	873
BstMBI	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
BstNI	CCWGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
BstNSI	RCATGY	3 cut(s)	1126, 2321, 2959
BstSCI	CCNGG	6 cut(s)	420, 690, 813, 1173, 2556, 2817
BstSFI	CTRYAG	4 cut(s)	239, 413, 1409, 1671
BstSLI	GKGCMC	1 cut(s)	1174
BstUI	CGCG	2 cut(s)	69, 2415
BstV2I	GAAGAC	2 cut(s)	721, 1125
BstX2I	RGATCY	4 cut(s)	216, 1289, 1514, 1551
BstXI	CCANNNNNNTGG	2 cut(s)	428, 1353
BstYI	RGATCY	4 cut(s)	216, 1289, 1514, 1551
BstZ17I	GTATAC	1 cut(s)	611
BsuRI	GGCC	9 cut(s)	122, 306, 1080, 1331, 1419, 1474, 2050, 2615, 2885
BtrI	CACGTC	1 cut(s)	37
BtsCI	GGATG	9 cut(s)	135, 709, 1366, 1486, 1965, 1988, 2399, 2519, 2804
BtsI	GCAGTG	1 cut(s)	1680
BtsIMutI	CAGTG	5 cut(s)	89, 974, 1680, 2611, 2641
BveI	ACCTGC	2 cut(s)	246, 733
Cac8I	GCNNGC	9 cut(s)	27, 360, 907, 930, 1066, 2028, 2040, 2113, 2319
CaiI	CAGNNNCTG	2 cut(s)	88, 412
CciI	TCATGA	1 cut(s)	2218
CfoI	GCGC	2 cut(s)	25, 2032
Cfr10I	RCCGGY	3 cut(s)	2762, 2869, 2891
Cfr13I	GGNCC	5 cut(s)	120, 305, 1329, 2815, 2884
CseI	GACGC	3 cut(s)	119, 1163, 2550
Csp6I	GTAC	4 cut(s)	1095, 1304, 2177, 2448
CviQI	GTAC	4 cut(s)	1095, 1304, 2177, 2448
DdeI	CTNAG	9 cut(s)	588, 653, 869, 1398, 1545, 1898, 2076, 2880, 2902
DpnI	GATC	7 cut(s)	218, 762, 1291, 1516, 1553, 1787, 2373
DpnII	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
DrdI	GACNNNNNNGTC	1 cut(s)	1462
DseDI	GACNNNNNNGTC	1 cut(s)	1462
EaeI	YGGCCR	2 cut(s)	2048, 2613
Eam1104I	CTCTTC	4 cut(s)	1727, 2268, 2829, 2968
EarI	CTCTTC	4 cut(s)	1727, 2268, 2829, 2968
Eco130I	CCWWGG	2 cut(s)	1204, 1789
Eco47I	GGWCC	1 cut(s)	2815
Eco57I	CTGAAG	4 cut(s)	715, 1508, 2613, 2861
Eco88I	CYCGRG	1 cut(s)	1624
EcoO109I	RGGNCCY	2 cut(s)	305, 2884
EcoRII	CCWGG	6 cut(s)	420, 690, 813, 1173, 2556, 2817
EcoT14I	CCWWGG	2 cut(s)	1204, 1789
EcoT22I	ATGCAT	1 cut(s)	2502
ErhI	CCWWGG	2 cut(s)	1204, 1789
Esp3I	CGTCTC	1 cut(s)	873
FalI	AAGNNNNNCTT	8 cut(s)	840, 872, 1301, 1333, 1808, 1840, 2838, 2870
FaqI	GGGAC	1 cut(s)	2658
FauNDI	CATATG	1 cut(s)	2407
FblI	GTMKAC	3 cut(s)	610, 796, 1236
FokI	GGATG	9 cut(s)	122, 696, 1373, 1493, 1972, 1975, 2386, 2506, 2811
FspBI	CTAG	7 cut(s)	1470, 1575, 1833, 1848, 2057, 2180, 2375
GlaI	GCGC	2 cut(s)	24, 2031
GsaI	CCCAGC	1 cut(s)	672
GsuI	CTGGAG	3 cut(s)	389, 1748, 2031
HaeIII	GGCC	9 cut(s)	122, 306, 1080, 1331, 1419, 1474, 2050, 2615, 2885
HapII	CCGG	5 cut(s)	467, 1214, 2763, 2870, 2892
HgaI	GACGC	3 cut(s)	119, 1163, 2550
HhaI	GCGC	2 cut(s)	25, 2032
Hin1I	GRCGYC	2 cut(s)	111, 2561
Hin6I	GCGC	2 cut(s)	23, 2030
HinP1I	GCGC	2 cut(s)	23, 2030
HincII	GTYRAC	1 cut(s)	797
HindII	GTYRAC	1 cut(s)	797
HindIII	AAGCTT	2 cut(s)	1310, 2063
HpaII	CCGG	5 cut(s)	467, 1214, 2763, 2870, 2892
HphI	GGTGA	4 cut(s)	133, 146, 302, 2563
Hpy166II	GTNNAC	6 cut(s)	34, 611, 797, 1237, 1467, 2701
Hpy188I	TCNGA	9 cut(s)	148, 589, 682, 919, 945, 1612, 1785, 2077, 2905
Hpy8I	GTNNAC	6 cut(s)	34, 611, 797, 1237, 1467, 2701
Hpy99I	CGWCG	1 cut(s)	128
HpyAV	CCTTC	9 cut(s)	10, 284, 1351, 1409, 1483, 1698, 2218, 2462, 2588
HpyCH4III	ACNGT	8 cut(s)	460, 562, 1094, 1263, 1459, 1587, 1969, 2636
HpyCH4IV	ACGT	2 cut(s)	36, 1168
HpyF3I	CTNAG	9 cut(s)	588, 653, 869, 1398, 1545, 1898, 2076, 2880, 2902
HpySE526I	ACGT	2 cut(s)	36, 1168
Hsp92I	GRCGYC	2 cut(s)	111, 2561
HspAI	GCGC	2 cut(s)	23, 2030
KpnI	GGTACC	1 cut(s)	2451
Kzo9I	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
LguI	GCTCTTC	1 cut(s)	2829
LmnI	GCTCC	7 cut(s)	173, 248, 940, 1216, 1541, 2282, 2507
MaeI	CTAG	7 cut(s)	1470, 1575, 1833, 1848, 2057, 2180, 2375
MaeII	ACGT	2 cut(s)	36, 1168
MaeIII	GTNAC	9 cut(s)	233, 1000, 1164, 1453, 2264, 2293, 2357, 2691, 2951
MalI	GATC	7 cut(s)	218, 762, 1291, 1516, 1553, 1787, 2373
MboI	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
MfeI	CAATTG	2 cut(s)	768, 2726
MflI	RGATCY	4 cut(s)	216, 1289, 1514, 1551
MhlI	GDGCHC	4 cut(s)	1174, 2082, 2122, 2759
MlsI	TGGCCA	2 cut(s)	2050, 2615
MluNI	TGGCCA	2 cut(s)	2050, 2615
MlyI	GAGTC	5 cut(s)	65, 491, 802, 1028, 1744
MmeI	TCCRAC	2 cut(s)	1458, 2550
Mox20I	TGGCCA	2 cut(s)	2050, 2615
Mph1103I	ATGCAT	1 cut(s)	2502
MroXI	GAANNNNTTC	2 cut(s)	1313, 2066
MscI	TGGCCA	2 cut(s)	2050, 2615
MslI	CAYNNNNRTG	3 cut(s)	2353, 2495, 2706
Msp20I	TGGCCA	2 cut(s)	2050, 2615
MspA1I	CMGCKG	1 cut(s)	2813
MspCI	CTTAAG	1 cut(s)	2158
MspI	CCGG	5 cut(s)	467, 1214, 2763, 2870, 2892
MspR9I	CCNGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
MunI	CAATTG	2 cut(s)	768, 2726
Mva1269I	GAATGC	1 cut(s)	2228
MvaI	CCWGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
MvnI	CGCG	2 cut(s)	69, 2415
NdeI	CATATG	1 cut(s)	2407
NdeII	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
NlaIV	GGNNCC	4 cut(s)	169, 747, 1537, 2449
NmeAIII	GCCGAG	2 cut(s)	323, 2141
NmuCI	GTSAC	7 cut(s)	1000, 1453, 2264, 2293, 2357, 2691, 2951
NsiI	ATGCAT	1 cut(s)	2502
NspI	RCATGY	3 cut(s)	1126, 2321, 2959
OliI	CACNNNNGTG	1 cut(s)	2706
PaeI	GCATGC	1 cut(s)	2321
PaeR7I	CTCGAG	1 cut(s)	1624
PagI	TCATGA	1 cut(s)	2218
PaqCI	CACCTGC	1 cut(s)	733
PasI	CCCWGGG	1 cut(s)	691
PciI	ACATGT	1 cut(s)	1122
PciSI	GCTCTTC	1 cut(s)	2829
PcsI	WCGNNNNNNNCGW	1 cut(s)	2419
PctI	GAATGC	1 cut(s)	2228
PdmI	GAANNNNTTC	2 cut(s)	1313, 2066
PfeI	GAWTC	9 cut(s)	43, 202, 409, 482, 685, 1184, 1249, 2573, 2786
PleI	GAGTC	5 cut(s)	64, 491, 801, 1028, 1743
PpsI	GAGTC	5 cut(s)	64, 491, 801, 1028, 1743
Ppu21I	YACGTR	1 cut(s)	1169
PscI	ACATGT	1 cut(s)	1122
PshBI	ATTAAT	1 cut(s)	1800
Psp6I	CCWGG	6 cut(s)	420, 690, 813, 1173, 2556, 2817
PspFI	CCCAGC	1 cut(s)	668
PspGI	CCWGG	6 cut(s)	420, 690, 813, 1173, 2556, 2817
PspN4I	GGNNCC	4 cut(s)	169, 747, 1537, 2449
PspPI	GGNCC	5 cut(s)	120, 305, 1329, 2815, 2884
PspXI	VCTCGAGB	1 cut(s)	1624
PstI	CTGCAG	3 cut(s)	243, 417, 1675
PstNI	CAGNNNCTG	2 cut(s)	88, 412
PsuI	RGATCY	4 cut(s)	216, 1289, 1514, 1551
RsaI	GTAC	4 cut(s)	1096, 1305, 2178, 2449
RsaNI	GTAC	4 cut(s)	1095, 1304, 2177, 2448
RseI	CAYNNNNRTG	3 cut(s)	2353, 2495, 2706
SalI	GTCGAC	1 cut(s)	795
SapI	GCTCTTC	1 cut(s)	2829
Sau3AI	GATC	7 cut(s)	216, 760, 1289, 1514, 1551, 1785, 2371
Sau96I	GGNCC	5 cut(s)	120, 305, 1329, 2815, 2884
ScaI	AGTACT	1 cut(s)	2178
SchI	GAGTC	5 cut(s)	65, 491, 802, 1028, 1744
ScrFI	CCNGG	6 cut(s)	422, 692, 815, 1175, 2558, 2819
SduI	GDGCHC	4 cut(s)	1174, 2082, 2122, 2759
SfcI	CTRYAG	4 cut(s)	239, 413, 1409, 1671
Sfr274I	CTCGAG	1 cut(s)	1624
SinI	GGWCC	1 cut(s)	2815
SlaI	CTCGAG	1 cut(s)	1624
SmiMI	CAYNNNNRTG	3 cut(s)	2353, 2495, 2706
SmlI	CTYRAG	3 cut(s)	566, 1624, 2158
SmoI	CTYRAG	3 cut(s)	566, 1624, 2158
SphI	GCATGC	1 cut(s)	2321
SsiI	CCGC	6 cut(s)	67, 114, 2106, 2415, 2813, 3016
SspI	AATATT	1 cut(s)	3022
SspMI	CTAG	7 cut(s)	1470, 1575, 1833, 1848, 2057, 2180, 2375
StyD4I	CCNGG	6 cut(s)	420, 690, 813, 1173, 2556, 2817
StyI	CCWWGG	2 cut(s)	1204, 1789
TaaI	ACNGT	8 cut(s)	460, 562, 1094, 1263, 1459, 1587, 1969, 2636
TaiI	ACGT	2 cut(s)	39, 1171
TaqI	TCGA	5 cut(s)	183, 500, 664, 796, 1625
TaqII	GACCGA	1 cut(s)	1426
TatI	WGTACW	3 cut(s)	1094, 1303, 2176
TauI	GCSGC	1 cut(s)	116
TfiI	GAWTC	9 cut(s)	43, 202, 409, 482, 685, 1184, 1249, 2573, 2786
TscAI	CASTG	5 cut(s)	89, 981, 1680, 2611, 2641
TseFI	GTSAC	7 cut(s)	1000, 1453, 2264, 2293, 2357, 2691, 2951
Tsp45I	GTSAC	7 cut(s)	1000, 1453, 2264, 2293, 2357, 2691, 2951
TspDTI	ATGAA	8 cut(s)	29, 636, 744, 829, 1497, 1698, 2235, 2337
TspGWI	ACGGA	2 cut(s)	1981, 2984
TspRI	CASTG	5 cut(s)	89, 981, 1680, 2611, 2641
Vha464I	CTTAAG	1 cut(s)	2158
VpaK11BI	GGWCC	1 cut(s)	2815
VspI	ATTAAT	1 cut(s)	1800
XapI	RAATTY	7 cut(s)	636, 1693, 1926, 2258, 2392, 2460, 2999
XceI	RCATGY	3 cut(s)	1126, 2321, 2959
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1017, 1474
XhoI	CTCGAG	1 cut(s)	1624
XmiI	GTMKAC	3 cut(s)	610, 796, 1236
XmnI	GAANNNNTTC	2 cut(s)	1313, 2066
XspI	CTAG	7 cut(s)	1470, 1575, 1833, 1848, 2057, 2180, 2375
ZrmI	AGTACT	1 cut(s)	2178
Zsp2I	ATGCAT	1 cut(s)	2502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.