Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011572

Physical Location & Seq

Genomic Coordinates Forward (+)

3651919 .. 3657712

Gene Structure 5794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42025

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGACTCTCAGCAGTATTCCGTTGGCTACGTCGGATCTTCAAATCAGTCATGGAGCTCGAAGAAATTCGACACTAATCTGTGCGCCGGTAATGGGGGAATCAGTTGATCAGATGCTGCGTCAAGTGCGACAGGCAAAGGAACTTGGTGCTGACCTTGTTGAGATTCGGTTGGACTACATTAAGAACTTCAGTCCAAGACAAGATCTCGAAACTTTGATTAAGCGCAGCCCTTTGCCAACACTCGTCACTTACAGGCCAAAATGGGAAGGTGGTGAGTATGAAGGAGATGAAAATAAGCGACAACAGGCACTCATTTTAGCCATGGAATTGGGAGCGGATTATATTGATGTTGAACTAAAGGTAGCAAATGACTTCTACAGTTCTATTCAAGGGAAGAAGCCAGAAAAGGTCAAAATCATAGTTTCTTCCCACAACTATGAGAATACTCCATCTGCTGAGGAAATTGGCAATCTTGTTGCAACGATACAAGCCACTGGAGCTGACATAGTCAAGGTCGCAACAACTGCCTTGGACATAACGGACAATGCAAGAATATTTCAAGTGCTAGCGCGTTCTCAAGTCCCAATGATAGGACTTTTGATGGGTGAGAAGGGTTTGATCTCTCGTGTACTTAGTGCAAAATATGGGTCATATGTCACATTTGGTACACTAGAGGCAGGTGAGGTATCAGCTCCTGGCCAGCCAACTGTAACGGATCTGTTGGAGTTATACAATTTTAGGCAGATTGGAGCCAATACCAAAGTACATGGTGTGATAGGAAATCCTATTGGTCACAGCAAAAGTCCTCATCTTTACAATGCAGCATTTAAAGCAAATAACTTCAATGGAATTTATTTGCCATTGCTGGTTGATAGCGTTGCAAACTTTATCAACACCTATAACTCCCCTGATTGGGTTGGGTACAGTTACACAATTCCTCACAAAGAAGCTGGATTCAAATGTTGTGATGAGATTGATCCTAATGCCCTGGCAATAGGAGCTATTAGTTGCATGATCAGGAACCCAACTGATGGGAAGTTAAAGGGCTATAATGTTGACTATCTTGGAGCAATTGCAGCTATTGAGGAAGGACTTCGAGGATTAGGATTGAACGGTTCAAGTAATGGATCTGGTTCCCCATTAGCTGGTAGGTTATTTGTGGTCATGGGAGCTGGTGGTGCTGGAAAGGCGCTTGCATATGGTGGAAAACAAAAGGGAGCAAGAGTTGTCGTTGCCAATCGCTCATTTGACAAAGCCAAGATACTGGCCGACAAAGTTGGAGGAGAAGCTATTACTCTTGCTGAGTTGGCAAACTTCCATCCAGAGGATGGTATGGTTCTTGCAAATACCACATCTGTTGGAATGAAACCAAGAACTGATCAAACACCCATCCCAAAGGAAGCTCTGAAGAACTACTGTTTGGTATTTGATGCCATTTATACACCTAAATGGACCAGACTCTTGACCGAAGCACAAGAGTCTGGAGCAGCTGTGGTTTTTGGGACAGAAATGTTCCTTAACCAAGCATTTGTACAGGTCGAAAAGTTTTCTGGTATACCTGCAAATAAGCAACTGATCAGGGATACATTGGCAAGAAACACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004764 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0019632 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055114 GO:0061458 GO:0071704 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHquinase_I Shikimate_DH Shikimate_dh_N

Protein Analysis

534

Amino Acids

57.67

Weight (kDa)

6.69

Isoelectric Point (pI)

24.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHquinase_I	PF01487	27 - 244	6.4e-70	Type I 3-dehydroquinase
Shikimate_dh_N	PF08501	258 - 336	1.1e-20	Shikimate dehydrogenase substrate binding domain
Shikimate_DH	PF01488	383 - 452	4.6e-06	Shikimate / quinate 5-dehydrogenase
SDH_C	PF18317	501 - 530	5.8e-06	Shikimate 5'-dehydrogenase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011572)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g04670 FvH4_6g04670 FvH4_6g04670
malus_domestica	MD04G1213800.v1.1 MD12G1228800.v1.1
prunus_persica	Prupe.6G334000_v2.0.a1 Prupe.6G334000_v2.0.a1
pyrus_communis	pycom04g18930 pycom12g21340
rosa_chinensis	RchiOBHm_Chr3g0453141
rosa_laevigata	RLG00000025534
rosa_multiflora	Rmu_sc0007132.1_g000006 Rmu_sc0013481.1_g000002
rosa_roxburghii	Rroxscaffold_6G00430200
rosa_rugosa	Rorug02G0646800
rosa_samantha	Rh3AG049400 Rh3BG050600 Rh3CG050800 Rh3DG051400
rosa_wichuraiana	Rw3G003790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	668
Acc36I	ACCTGC	2 cut(s)	668, 1567
AccB7I	CCANNNNNTGG	3 cut(s)	1031, 1145, 1328
AccBSI	CCGCTC	1 cut(s)	335
AccI	GTMKAC	1 cut(s)	1555
AccII	CGCG	1 cut(s)	571
AciI	CCGC	1 cut(s)	335
AclWI	GGATC	4 cut(s)	42, 723, 971, 1135
AcoI	YGGCCR	2 cut(s)	697, 1266
AcsI	RAATTY	2 cut(s)	64, 849
AcuI	CTGAAG	2 cut(s)	172, 1427
AfaI	GTAC	5 cut(s)	630, 667, 765, 923, 1533
AfiI	CCNNNNNNNGG	8 cut(s)	92, 590, 912, 913, 1031, 1145, 1324, 1328
AgsI	TTSAA	8 cut(s)	41, 353, 389, 560, 844, 958, 1111, 1119
AjnI	CCWGG	2 cut(s)	694, 987
AjuI	GAANNNNNNNTTGG	2 cut(s)	1403, 1435
Alw21I	GWGCWC	1 cut(s)	58
AlwI	GGATC	4 cut(s)	42, 723, 971, 1135
AlwNI	CAGNNNCTG	2 cut(s)	115, 695
AoxI	GGCC	3 cut(s)	254, 697, 1266
ApeKI	GCWGC	5 cut(s)	115, 225, 821, 1076, 1487
ApoI	RAATTY	2 cut(s)	64, 849
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
Asp700I	GAANNNNTTC	2 cut(s)	64, 1092
AspLEI	GCGC	4 cut(s)	85, 225, 571, 1192
AspS9I	GGNCC	1 cut(s)	1452
AsuHPI	GGTGA	3 cut(s)	284, 617, 692
AsuNHI	GCTAGC	1 cut(s)	565
AvaII	GGWCC	1 cut(s)	1452
BalI	TGGCCA	1 cut(s)	699
BanII	GRGCYC	1 cut(s)	58
BauI	CACGAG	1 cut(s)	624
Bbv12I	GWGCWC	1 cut(s)	58
BbvCI	CCTCAGC	1 cut(s)	456
BbvI	GCAGC	5 cut(s)	102, 237, 833, 1088, 1499
BccI	CCATC	6 cut(s)	457, 595, 1025, 1322, 1326, 1397
BciT130I	CCWGG	2 cut(s)	696, 989
BciVI	GTATCC	1 cut(s)	1576
BclI	TGATCA	4 cut(s)	106, 1014, 1378, 1575
BfaI	CTAG	2 cut(s)	566, 671
BfmI	CTRYAG	1 cut(s)	376
BfoI	RGCGCY	1 cut(s)	1193
BfuAI	ACCTGC	2 cut(s)	668, 1567
BfuI	GTATCC	1 cut(s)	1576
BglII	AGATCT	1 cut(s)	202
BisI	GCNGC	5 cut(s)	116, 226, 822, 1077, 1488
BlsI	GCNGC	5 cut(s)	117, 227, 823, 1078, 1489
Bme1390I	CCNGG	2 cut(s)	696, 989
Bme18I	GGWCC	1 cut(s)	1452
BmgT120I	GGNCC	1 cut(s)	1452
BmiI	GGNNCC	3 cut(s)	751, 1022, 1135
BmrFI	CCNGG	2 cut(s)	696, 989
BmsI	GCATC	2 cut(s)	102, 1420
BmtI	GCTAGC	1 cut(s)	569
BpmI	CTGGAG	2 cut(s)	516, 1503
Bpu10I	CCTNAGC	1 cut(s)	456
BpuEI	CTTGAG	1 cut(s)	561
BsaJI	CCNNGG	3 cut(s)	321, 528, 987
BsaXI	ACNNNNNCTCC	4 cut(s)	1209, 1239, 1476, 1506
Bsc4I	CCNNNNNNNGG	8 cut(s)	92, 590, 912, 913, 1031, 1145, 1324, 1328
Bse118I	RCCGGY	1 cut(s)	85
Bse1I	ACTGG	2 cut(s)	499, 1269
Bse3DI	GCAATG	1 cut(s)	860
BseBI	CCWGG	2 cut(s)	696, 989
BseDI	CCNNGG	3 cut(s)	321, 528, 987
BseGI	GGATG	3 cut(s)	1318, 1333, 1389
BseLI	CCNNNNNNNGG	8 cut(s)	92, 590, 912, 913, 1031, 1145, 1324, 1328
BseMI	GCAATG	1 cut(s)	860
BseMII	CTCAG	3 cut(s)	22, 447, 1293
BseNI	ACTGG	2 cut(s)	499, 1269
BseRI	GAGGAG	1 cut(s)	1296
BseXI	GCAGC	5 cut(s)	102, 237, 833, 1088, 1499
Bsh1236I	CGCG	1 cut(s)	571
BshFI	GGCC	3 cut(s)	256, 699, 1268
BsiHKAI	GWGCWC	1 cut(s)	58
BsiSI	CCGG	1 cut(s)	86
BslFI	GGGAC	2 cut(s)	566, 1516
BslI	CCNNNNNNNGG	8 cut(s)	92, 590, 912, 913, 1031, 1145, 1324, 1328
BsmFI	GGGAC	2 cut(s)	566, 1516
BsnI	GGCC	3 cut(s)	256, 699, 1268
Bsp1286I	GDGCHC	1 cut(s)	58
Bsp1407I	TGTACA	1 cut(s)	1531
Bsp19I	CCATGG	1 cut(s)	321
BspACI	CCGC	1 cut(s)	335
BspANI	GGCC	3 cut(s)	256, 699, 1268
BspCNI	CTCAG	3 cut(s)	21, 448, 1294
BspFNI	CGCG	1 cut(s)	571
BspLI	GGNNCC	3 cut(s)	751, 1022, 1135
BspMI	ACCTGC	2 cut(s)	668, 1567
BspOI	GCTAGC	1 cut(s)	569
BspPI	GGATC	4 cut(s)	42, 723, 971, 1135
BsrBI	CCGCTC	1 cut(s)	335
BsrDI	GCAATG	1 cut(s)	860
BsrFI	RCCGGY	1 cut(s)	85
BsrGI	TGTACA	1 cut(s)	1531
BsrI	ACTGG	2 cut(s)	499, 1269
BssAI	RCCGGY	1 cut(s)	85
BssECI	CCNNGG	3 cut(s)	321, 528, 987
BssNAI	GTATAC	1 cut(s)	1556
BssSI	CACGAG	1 cut(s)	624
BssT1I	CCWWGG	2 cut(s)	321, 528
Bst1107I	GTATAC	1 cut(s)	1556
Bst2BI	CACGAG	1 cut(s)	624
Bst2UI	CCWGG	2 cut(s)	696, 989
Bst4CI	ACNGT	5 cut(s)	380, 709, 926, 1115, 1418
BstAPI	GCANNNNNTGC	1 cut(s)	524
BstAUI	TGTACA	1 cut(s)	1531
BstC8I	GCNNGC	3 cut(s)	567, 701, 1194
BstDEI	CTNAG	4 cut(s)	8, 456, 632, 1302
BstDSI	CCRYGG	1 cut(s)	321
BstF5I	GGATG	3 cut(s)	1318, 1333, 1389
BstFNI	CGCG	1 cut(s)	571
BstH2I	RGCGCY	1 cut(s)	1193
BstHHI	GCGC	4 cut(s)	85, 225, 571, 1192
BstMWI	GCNNNNNNNGC	9 cut(s)	124, 497, 524, 830, 998, 1076, 1178, 1187, 1307
BstNI	CCWGG	2 cut(s)	696, 989
BstSCI	CCNGG	2 cut(s)	694, 987
BstSFI	CTRYAG	1 cut(s)	376
BstUI	CGCG	1 cut(s)	571
BstV1I	GCAGC	5 cut(s)	102, 237, 833, 1088, 1499
BstX2I	RGATCY	4 cut(s)	34, 202, 715, 1127
BstXI	CCANNNNNNTGG	2 cut(s)	328, 1264
BstYI	RGATCY	4 cut(s)	34, 202, 715, 1127
BstZ17I	GTATAC	1 cut(s)	1556
BsuI	GTATCC	1 cut(s)	1576
BsuRI	GGCC	3 cut(s)	256, 699, 1268
BtgI	CCRYGG	1 cut(s)	321
BtsCI	GGATG	3 cut(s)	1318, 1333, 1389
BtsIMutI	CAGTG	1 cut(s)	492
BveI	ACCTGC	2 cut(s)	668, 1567
Cac8I	GCNNGC	3 cut(s)	567, 701, 1194
CaiI	CAGNNNCTG	2 cut(s)	115, 695
CfoI	GCGC	4 cut(s)	85, 225, 571, 1192
Cfr10I	RCCGGY	1 cut(s)	85
Cfr13I	GGNCC	1 cut(s)	1452
CseI	GACGC	1 cut(s)	107
Csp6I	GTAC	5 cut(s)	629, 666, 764, 922, 1532
CspCI	CAANNNNNGTGG	2 cut(s)	1339, 1374
CviAII	CATG	6 cut(s)	50, 322, 767, 1012, 1165, 1602
CviQI	GTAC	5 cut(s)	629, 666, 764, 922, 1532
DdeI	CTNAG	4 cut(s)	8, 456, 632, 1302
DraI	TTTAAA	1 cut(s)	829
EaeI	YGGCCR	2 cut(s)	697, 1266
Ecl136II	GAGCTC	1 cut(s)	56
Eco130I	CCWWGG	2 cut(s)	321, 528
Eco24I	GRGCYC	1 cut(s)	58
Eco47I	GGWCC	1 cut(s)	1452
Eco53kI	GAGCTC	1 cut(s)	56
Eco57I	CTGAAG	2 cut(s)	172, 1427
EcoICRI	GAGCTC	1 cut(s)	56
EcoRII	CCWGG	2 cut(s)	694, 987
EcoT14I	CCWWGG	2 cut(s)	321, 528
EcoT38I	GRGCYC	1 cut(s)	58
ErhI	CCWWGG	2 cut(s)	321, 528
FaeI	CATG	6 cut(s)	53, 325, 770, 1015, 1168, 1605
FaqI	GGGAC	2 cut(s)	566, 1516
FatI	CATG	6 cut(s)	49, 321, 766, 1011, 1164, 1601
FauNDI	CATATG	2 cut(s)	652, 1198
FbaI	TGATCA	4 cut(s)	106, 1014, 1378, 1575
FblI	GTMKAC	1 cut(s)	1555
Fnu4HI	GCNGC	5 cut(s)	116, 226, 822, 1077, 1488
FokI	GGATG	3 cut(s)	1305, 1340, 1376
FriOI	GRGCYC	1 cut(s)	58
Fsp4HI	GCNGC	5 cut(s)	116, 226, 822, 1077, 1488
FspBI	CTAG	2 cut(s)	566, 671
GlaI	GCGC	4 cut(s)	84, 224, 570, 1191
GluI	GCNGC	5 cut(s)	116, 226, 822, 1077, 1488
GsuI	CTGGAG	2 cut(s)	516, 1503
HaeII	RGCGCY	1 cut(s)	1193
HaeIII	GGCC	3 cut(s)	256, 699, 1268
HapII	CCGG	1 cut(s)	86
HgaI	GACGC	1 cut(s)	107
HhaI	GCGC	4 cut(s)	85, 225, 571, 1192
Hin1II	CATG	6 cut(s)	53, 325, 770, 1015, 1168, 1605
Hin6I	GCGC	4 cut(s)	83, 223, 569, 1190
HinP1I	GCGC	4 cut(s)	83, 223, 569, 1190
HincII	GTYRAC	1 cut(s)	1057
HindII	GTYRAC	1 cut(s)	1057
HinfI	GANTC	6 cut(s)	4, 98, 163, 954, 1458, 1478
HpaII	CCGG	1 cut(s)	86
HphI	GGTGA	3 cut(s)	284, 617, 692
Hpy166II	GTNNAC	4 cut(s)	629, 668, 1057, 1556
Hpy188I	TCNGA	3 cut(s)	34, 111, 1407
Hpy188III	TCNNGA	5 cut(s)	206, 1018, 1322, 1462, 1482
Hpy8I	GTNNAC	4 cut(s)	629, 668, 1057, 1556
Hpy99I	CGWCG	1 cut(s)	34
HpyAV	CCTTC	4 cut(s)	260, 275, 604, 1082
HpyCH4III	ACNGT	5 cut(s)	380, 709, 926, 1115, 1418
HpyCH4IV	ACGT	1 cut(s)	29
HpyF10VI	GCNNNNNNNGC	9 cut(s)	124, 497, 524, 830, 998, 1076, 1178, 1187, 1307
HpyF3I	CTNAG	4 cut(s)	8, 456, 632, 1302
HpySE526I	ACGT	1 cut(s)	29
Hsp92II	CATG	6 cut(s)	53, 325, 770, 1015, 1168, 1605
HspAI	GCGC	4 cut(s)	83, 223, 569, 1190
Ksp22I	TGATCA	4 cut(s)	106, 1014, 1378, 1575
Lsp1109I	GCAGC	5 cut(s)	102, 237, 833, 1088, 1499
LweI	GCATC	2 cut(s)	102, 1420
MaeI	CTAG	2 cut(s)	566, 671
MaeII	ACGT	1 cut(s)	29
MaeIII	GTNAC	5 cut(s)	244, 655, 709, 791, 926
MbiI	CCGCTC	1 cut(s)	335
MboII	GAAGA	5 cut(s)	29, 72, 406, 417, 1420
MfeI	CAATTG	1 cut(s)	1071
MflI	RGATCY	4 cut(s)	34, 202, 715, 1127
MhlI	GDGCHC	1 cut(s)	58
MlsI	TGGCCA	1 cut(s)	699
MluCI	AATT	7 cut(s)	64, 326, 462, 733, 849, 933, 1071
MluNI	TGGCCA	1 cut(s)	699
MlyI	GAGTC	2 cut(s)	1452, 1487
MmeI	TCCRAC	5 cut(s)	12, 150, 702, 1258, 1339
MnlI	CCTC	9 cut(s)	451, 667, 676, 816, 948, 1078, 1091, 1274, 1318
Mox20I	TGGCCA	1 cut(s)	699
MroXI	GAANNNNTTC	2 cut(s)	64, 1092
MscI	TGGCCA	1 cut(s)	699
MseI	TTAA	5 cut(s)	180, 219, 828, 1040, 1518
MslI	CAYNNNNRTG	2 cut(s)	435, 1447
Msp20I	TGGCCA	1 cut(s)	699
MspA1I	CMGCKG	1 cut(s)	1490
MspI	CCGG	1 cut(s)	86
MspR9I	CCNGG	2 cut(s)	696, 989
MunI	CAATTG	1 cut(s)	1071
MvaI	CCWGG	2 cut(s)	696, 989
MvnI	CGCG	1 cut(s)	571
MwoI	GCNNNNNNNGC	9 cut(s)	124, 497, 524, 830, 998, 1076, 1178, 1187, 1307
NcoI	CCATGG	1 cut(s)	321
NdeI	CATATG	2 cut(s)	652, 1198
NheI	GCTAGC	1 cut(s)	565
NlaIII	CATG	6 cut(s)	53, 325, 770, 1015, 1168, 1605
NlaIV	GGNNCC	3 cut(s)	751, 1022, 1135
NmuCI	GTSAC	3 cut(s)	244, 655, 791
PaqCI	CACCTGC	1 cut(s)	668
PdmI	GAANNNNTTC	2 cut(s)	64, 1092
PfeI	GAWTC	3 cut(s)	98, 163, 954
PflFI	GACNNNGTC	1 cut(s)	506
PflMI	CCANNNNNTGG	3 cut(s)	1031, 1145, 1328
PkrI	GCNGC	5 cut(s)	117, 227, 823, 1078, 1489
PleI	GAGTC	2 cut(s)	1452, 1486
PpsI	GAGTC	2 cut(s)	1452, 1486
Psp124BI	GAGCTC	1 cut(s)	58
Psp6I	CCWGG	2 cut(s)	694, 987
PspGI	CCWGG	2 cut(s)	694, 987
PspN4I	GGNNCC	3 cut(s)	751, 1022, 1135
PspPI	GGNCC	1 cut(s)	1452
PstNI	CAGNNNCTG	2 cut(s)	115, 695
PsuI	RGATCY	4 cut(s)	34, 202, 715, 1127
PsyI	GACNNNGTC	1 cut(s)	506
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	5 cut(s)	630, 667, 765, 923, 1533
RsaNI	GTAC	5 cut(s)	629, 666, 764, 922, 1532
RseI	CAYNNNNRTG	2 cut(s)	435, 1447
SacI	GAGCTC	1 cut(s)	58
SaqAI	TTAA	5 cut(s)	180, 219, 828, 1040, 1518
SatI	GCNGC	5 cut(s)	116, 226, 822, 1077, 1488
Sau96I	GGNCC	1 cut(s)	1452
SchI	GAGTC	2 cut(s)	1452, 1487
ScrFI	CCNGG	2 cut(s)	696, 989
SduI	GDGCHC	1 cut(s)	58
SfaNI	GCATC	2 cut(s)	102, 1420
SfcI	CTRYAG	1 cut(s)	376
SinI	GGWCC	1 cut(s)	1452
SmiMI	CAYNNNNRTG	2 cut(s)	435, 1447
SmlI	CTYRAG	1 cut(s)	576
SmoI	CTYRAG	1 cut(s)	576
Sse9I	AATT	7 cut(s)	64, 326, 462, 733, 849, 933, 1071
SsiI	CCGC	1 cut(s)	335
SspI	AATATT	1 cut(s)	555
SspMI	CTAG	2 cut(s)	566, 671
SstI	GAGCTC	1 cut(s)	58
StyD4I	CCNGG	2 cut(s)	694, 987
StyI	CCWWGG	2 cut(s)	321, 528
TaaI	ACNGT	5 cut(s)	380, 709, 926, 1115, 1418
TaiI	ACGT	1 cut(s)	32
TaqI	TCGA	5 cut(s)	58, 68, 207, 1096, 1539
TaqII	GACCGA	1 cut(s)	1481
TasI	AATT	7 cut(s)	64, 326, 462, 733, 849, 933, 1071
TatI	WGTACW	3 cut(s)	628, 763, 1531
TfiI	GAWTC	3 cut(s)	98, 163, 954
Tru1I	TTAA	5 cut(s)	180, 219, 828, 1040, 1518
Tru9I	TTAA	5 cut(s)	180, 219, 828, 1040, 1518
TscAI	CASTG	1 cut(s)	499
TseFI	GTSAC	3 cut(s)	244, 655, 791
TseI	GCWGC	5 cut(s)	115, 225, 821, 1076, 1487
Tsp45I	GTSAC	3 cut(s)	244, 655, 791
TspDTI	ATGAA	3 cut(s)	294, 303, 1379
TspGWI	ACGGA	3 cut(s)	9, 554, 728
TspRI	CASTG	1 cut(s)	499
Tth111I	GACNNNGTC	1 cut(s)	506
Van91I	CCANNNNNTGG	3 cut(s)	1031, 1145, 1328
VpaK11BI	GGWCC	1 cut(s)	1452
XapI	RAATTY	2 cut(s)	64, 849
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1325
XmiI	GTMKAC	1 cut(s)	1555
XmnI	GAANNNNTTC	2 cut(s)	64, 1092
XspI	CTAG	2 cut(s)	566, 671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.