RchiOBHm_Chr4g0403621

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
22992445 .. 22997286
4842 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37533

Sequence Viewer

Length: 255 bp
ATGAAGGTTGTCGCTGCATATTTGCTCACTGTTTTGGGCGGCAACGCCAGCCTCTCCGCCAAGGACTTGGAAGACCATTCTCGCCTCCGGTCCTTTAATGTGAACAACTTAACTGGACCAATCTCTGTCTTCTTGGGATACATCAGCACTCTAAAGTACTTGAACCTTGAGACTAACATGTGTTCTGGAACTGTTCCTCCTGAGCTTGGGAAGTTGGTTAACTTGCAGAATCTGAACTGCATGAGAGAGTATTAG

Protein Analysis

84

Amino Acids

9.24

Weight (kDa)

7.78

Isoelectric Point (pI)

26.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 39, 57
AfaI GTAC 1 cut(s) 158
AfiI CCNNNNNNNGG 1 cut(s) 206
AflIII ACRYGT 1 cut(s) 177
AgsI TTSAA 1 cut(s) 163
AloI GAACNNNNNNTCC 2 cut(s) 181, 213
AluBI AGCT 1 cut(s) 205
AluI AGCT 1 cut(s) 205
Alw26I GTCTC 1 cut(s) 164
AlwNI CAGNNNCTG 1 cut(s) 232
ApeKI GCWGC 1 cut(s) 14
AspS9I GGNCC 2 cut(s) 90, 116
AvaII GGWCC 2 cut(s) 90, 116
BbsI GAAGAC 2 cut(s) 78, 121
BciVI GTATCC 1 cut(s) 131
BcoDI GTCTC 1 cut(s) 164
BfuI GTATCC 1 cut(s) 131
BisI GCNGC 2 cut(s) 15, 40
BlsI GCNGC 2 cut(s) 16, 41
BmcAI AGTACT 1 cut(s) 158
Bme18I GGWCC 2 cut(s) 90, 116
BmgT120I GGNCC 2 cut(s) 90, 116
BpiI GAAGAC 2 cut(s) 78, 121
Bpu10I CCTNAGC 1 cut(s) 201
BpuEI CTTGAG 1 cut(s) 188
BsaJI CCNNGG 1 cut(s) 60
BsaWI WCCGGW 1 cut(s) 87
BsaXI ACNNNNNCTCC 2 cut(s) 181, 211
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse1I ACTGG 1 cut(s) 118
BseDI CCNNGG 1 cut(s) 60
BseLI CCNNNNNNNGG 1 cut(s) 206
BseMII CTCAG 1 cut(s) 192
BseNI ACTGG 1 cut(s) 118
BsiSI CCGG 1 cut(s) 88
BslI CCNNNNNNNGG 1 cut(s) 206
BsmAI GTCTC 1 cut(s) 164
BspACI CCGC 2 cut(s) 39, 57
BspCNI CTCAG 1 cut(s) 193
BsrI ACTGG 1 cut(s) 118
BssECI CCNNGG 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 60
Bst4CI ACNGT 2 cut(s) 31, 193
BstC8I GCNNGC 1 cut(s) 49
BstDEI CTNAG 1 cut(s) 201
BstMAI GTCTC 1 cut(s) 164
BstMWI GCNNNNNNNGC 1 cut(s) 48
BstNSI RCATGY 1 cut(s) 181
BstV2I GAAGAC 2 cut(s) 78, 121
BstXI CCANNNNNNTGG 1 cut(s) 67
BsuI GTATCC 1 cut(s) 131
BtsIMutI CAGTG 1 cut(s) 27
Cac8I GCNNGC 1 cut(s) 49
CaiI CAGNNNCTG 1 cut(s) 232
Cfr13I GGNCC 2 cut(s) 90, 116
Csp6I GTAC 1 cut(s) 157
CviAII CATG 2 cut(s) 178, 241
CviJI RGCY 2 cut(s) 51, 205
CviKI_1 RGCY 2 cut(s) 51, 205
CviQI GTAC 1 cut(s) 157
DdeI CTNAG 1 cut(s) 201
EciI GGCGGA 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 60
Eco47I GGWCC 2 cut(s) 90, 116
EcoT14I CCWWGG 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 60
FaeI CATG 2 cut(s) 181, 244
FaiI YATR 3 cut(s) 19, 179, 242
FatI CATG 2 cut(s) 177, 240
Fnu4HI GCNGC 2 cut(s) 15, 40
Fsp4HI GCNGC 2 cut(s) 15, 40
GluI GCNGC 2 cut(s) 15, 40
HapII CCGG 1 cut(s) 88
Hin1II CATG 2 cut(s) 181, 244
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 1 cut(s) 229
HpaI GTTAAC 1 cut(s) 220
HpaII CCGG 1 cut(s) 88
Hpy166II GTNNAC 2 cut(s) 103, 220
Hpy188I TCNGA 1 cut(s) 234
Hpy188III TCNNGA 2 cut(s) 186, 200
Hpy8I GTNNAC 2 cut(s) 103, 220
HpyCH4III ACNGT 2 cut(s) 31, 193
HpyCH4V TGCA 3 cut(s) 17, 226, 240
HpyF10VI GCNNNNNNNGC 1 cut(s) 48
HpyF3I CTNAG 1 cut(s) 201
Hsp92II CATG 2 cut(s) 181, 244
KspAI GTTAAC 1 cut(s) 220
LpnPI CCDG 5 cut(s) 61, 99, 101, 171, 213
MboII GAAGA 2 cut(s) 83, 121
MnlI CCTC 3 cut(s) 62, 95, 207
MseI TTAA 3 cut(s) 96, 110, 219
MspI CCGG 1 cut(s) 88
MwoI GCNNNNNNNGC 1 cut(s) 48
NlaIII CATG 2 cut(s) 181, 244
NspI RCATGY 1 cut(s) 181
PciI ACATGT 1 cut(s) 177
PfeI GAWTC 1 cut(s) 229
PkrI GCNGC 2 cut(s) 16, 41
PscI ACATGT 1 cut(s) 177
PspPI GGNCC 2 cut(s) 90, 116
PstNI CAGNNNCTG 1 cut(s) 232
RsaI GTAC 1 cut(s) 158
RsaNI GTAC 1 cut(s) 157
SaqAI TTAA 3 cut(s) 96, 110, 219
SatI GCNGC 2 cut(s) 15, 40
Sau96I GGNCC 2 cut(s) 90, 116
ScaI AGTACT 1 cut(s) 158
SetI ASST 3 cut(s) 9, 168, 207
SinI GGWCC 2 cut(s) 90, 116
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
SsiI CCGC 2 cut(s) 39, 57
StyI CCWWGG 1 cut(s) 60
TaaI ACNGT 2 cut(s) 31, 193
TatI WGTACW 1 cut(s) 156
TauI GCSGC 1 cut(s) 42
TfiI GAWTC 1 cut(s) 229
Tru1I TTAA 3 cut(s) 96, 110, 219
Tru9I TTAA 3 cut(s) 96, 110, 219
TscAI CASTG 1 cut(s) 34
TseI GCWGC 1 cut(s) 14
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 34
VpaK11BI GGWCC 2 cut(s) 90, 116
XceI RCATGY 1 cut(s) 181
ZrmI AGTACT 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.