RchiOBHm_Chr4g0418391

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
43807615 .. 43808015
401 bp
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UTR
Exon/CDS
Intron
PRQ38838

Sequence Viewer

Length: 207 bp
ATGTGTGTCCTCCTTGGTCCCAAAGTGTGCAAGAGATGCTCTTACACCTTGTCCCCTAAATGGTCCCCAAATAGACAAGGTGACAAAAGGACAAGGTGTAGGGATATATTTGAATTTCAAGTGATGGGATATTTTCACAACCATGGTCCTCCTTTGCTGGAGAAAAGACCCTCCATGAGTGGCGGCTCGCCGGAAAAGTTTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

7.8

Weight (kDa)

9.69

Isoelectric Point (pI)

60.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 183
AcsI RAATTY 1 cut(s) 113
AfiI CCNNNNNNNGG 1 cut(s) 60
AgsI TTSAA 2 cut(s) 113, 119
ApoI RAATTY 1 cut(s) 113
AspS9I GGNCC 3 cut(s) 17, 63, 146
AsuHPI GGTGA 1 cut(s) 92
AvaII GGWCC 3 cut(s) 17, 63, 146
BccI CCATC 1 cut(s) 118
BisI GCNGC 1 cut(s) 184
BlsI GCNGC 1 cut(s) 185
Bme18I GGWCC 3 cut(s) 17, 63, 146
BmgT120I GGNCC 3 cut(s) 17, 63, 146
BmiI GGNNCC 2 cut(s) 19, 65
BmsI GCATC 1 cut(s) 26
BpmI CTGGAG 1 cut(s) 179
BsaJI CCNNGG 2 cut(s) 13, 142
Bsc4I CCNNNNNNNGG 1 cut(s) 60
BseDI CCNNGG 2 cut(s) 13, 142
BseLI CCNNNNNNNGG 1 cut(s) 60
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 3 cut(s) 3, 37, 49
BslI CCNNNNNNNGG 1 cut(s) 60
BsmFI GGGAC 3 cut(s) 3, 37, 49
Bsp19I CCATGG 1 cut(s) 142
BspACI CCGC 1 cut(s) 183
BspLI GGNNCC 2 cut(s) 19, 65
BssECI CCNNGG 2 cut(s) 13, 142
BssT1I CCWWGG 2 cut(s) 13, 142
BstAPI GCANNNNNTGC 1 cut(s) 36
BstC8I GCNNGC 1 cut(s) 188
BstDSI CCRYGG 1 cut(s) 142
BstMWI GCNNNNNNNGC 1 cut(s) 36
BtgI CCRYGG 1 cut(s) 142
Cac8I GCNNGC 1 cut(s) 188
Cfr13I GGNCC 3 cut(s) 17, 63, 146
CviAII CATG 2 cut(s) 143, 175
CviJI RGCY 1 cut(s) 186
CviKI_1 RGCY 1 cut(s) 186
Eco130I CCWWGG 2 cut(s) 13, 142
Eco47I GGWCC 3 cut(s) 17, 63, 146
EcoT14I CCWWGG 2 cut(s) 13, 142
ErhI CCWWGG 2 cut(s) 13, 142
FaeI CATG 2 cut(s) 146, 178
FaiI YATR 3 cut(s) 107, 144, 176
FaqI GGGAC 3 cut(s) 3, 37, 49
FatI CATG 2 cut(s) 142, 174
Fnu4HI GCNGC 1 cut(s) 184
Fsp4HI GCNGC 1 cut(s) 184
GluI GCNGC 1 cut(s) 184
GsuI CTGGAG 1 cut(s) 179
HapII CCGG 1 cut(s) 191
Hin1II CATG 2 cut(s) 146, 178
HpaII CCGG 1 cut(s) 191
HphI GGTGA 1 cut(s) 92
HpyCH4V TGCA 1 cut(s) 30
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
Hsp92II CATG 2 cut(s) 146, 178
LpnPI CCDG 1 cut(s) 143
LweI GCATC 1 cut(s) 26
MaeIII GTNAC 1 cut(s) 80
MluCI AATT 1 cut(s) 113
MnlI CCTC 3 cut(s) 20, 159, 181
MslI CAYNNNNRTG 1 cut(s) 141
MspI CCGG 1 cut(s) 191
MwoI GCNNNNNNNGC 1 cut(s) 36
NcoI CCATGG 1 cut(s) 142
NlaIII CATG 2 cut(s) 146, 178
NlaIV GGNNCC 2 cut(s) 19, 65
NmuCI GTSAC 1 cut(s) 80
PkrI GCNGC 1 cut(s) 185
PspN4I GGNNCC 2 cut(s) 19, 65
PspPI GGNCC 3 cut(s) 17, 63, 146
RseI CAYNNNNRTG 1 cut(s) 141
SatI GCNGC 1 cut(s) 184
Sau96I GGNCC 3 cut(s) 17, 63, 146
SetI ASST 3 cut(s) 50, 82, 98
SfaNI GCATC 1 cut(s) 26
SinI GGWCC 3 cut(s) 17, 63, 146
SmiMI CAYNNNNRTG 1 cut(s) 141
Sse9I AATT 1 cut(s) 113
SsiI CCGC 1 cut(s) 183
StyI CCWWGG 2 cut(s) 13, 142
TasI AATT 1 cut(s) 113
TauI GCSGC 1 cut(s) 186
TseFI GTSAC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 80
VpaK11BI GGWCC 3 cut(s) 17, 63, 146
XapI RAATTY 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.