Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012241

Physical Location & Seq

Genomic Coordinates Forward (+)

59574897 .. 59578712

Gene Structure 3816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40457

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGATACCGCCGGAGCAGGAAAACACCATGACAAACACTACTCCAACTAACAAGTCTAGCATACTCTCTAATGTAAGCAGGTCTGAGAATTATCAGACGGGCTGGGTTCATGCCGAACCGTCTGCTGGAACTACTAACGGAAGCCCGCGTCTGGCACCGGATGACATGCCGGAACAACCACGTCCGAGTACCCCTCATAGAGCTTCCGTCTTGCGCGAGTCCCTGCGCCCTGTGACACTTAAGTTCGAAGACGTCACCTACAGCATTAAGCTGGAGCCGACAAAGGGTAGTTGCGTCACTTCATATAACGAGCCAAAGCAAACACGAAATCTACTGAATGGGGTGAGTGGGATTGTGCGACCGGGGGAGCTCCTCGCAATGCTGGGGCCCTCCGGCAGCGGCAAGACCACTCTCTTGACGGCACTCGGCGGCCGCCTGCCGGGAAAAATCTCCGGCAAAGTGACCTACAATGGCCAGCATTTCTCAAGCTCCATGAAGCACAACACCGGCTTTGTGACACAAGATGATGTTCTATATCCTCATCTGACTGTGCTCGAAACCCTAACATATACCGCCCTTTTGAGGCTTCCAAAGCAGCTGAGCAAGGAAGAGAAAAAAGAGCAGGCCGAGACGGTTATGGTGGAGCTCGGGTTGACCCGTTGCAGTGACAGTGTTATTGGCGGGCCTTTGCTGCGTGGGCTCTCAGGTGGGGAGAGGAAACGGGTCAGTATCGGGCAGGAGATGCTGGTGAACCCAAGTCTTTTGTTGCTGGACGAGCCTACCTCGGGGCTCGACTCTACCACGGCGCATCGTATAGTTGCTACGCTGCGCCTACTGGCGAGAGGTGGGAGGACAGTGATCACCACCATCCACCAGCCGTCCAGCAGGTTGTATAGGATGTTTGATAAGGTGGTAGTTTTGTCGGACGGGTGCCCGATTTACAGCGGGCATGCAGGTCGGGTCATGGAGTATTTCGGGTCCGTTGGGTATGAGGTCGGGTTCAATTTCATCAACCCGGCAGATTTCTTGCTTGATCTTGCGAATGGTATAGCACCTGATGCTAAACAAGATGATCAACTGGAGTATAATGGCAGATTAGATCATCACGAAGAACAAAACACAACTAAGCAGTTTCTGATATCATCATATAAAAAGAACCTATACCCTGCATTGAAGGCAGAGATTCAGCAAAGTCAAAAAGACCCAGCTGTTCTTTCTTCTTCTTCAAGAACATCATCATCCAGAGGTAGTCGAGATTACGAATGGACTACCAGCTGGTGGGAGCAATTCAAGGTTTTGCTTCTGAGGGGTTTGAAAGAGAGAAAGCATGAATCTTTCTCGGGTTTAAGGATATTCCAAGTCATGTCGGTTGCAATTCTCTCAGGCCTTTGTTGGTGGCACTCAGACACTTCACATTTGCAAGACCAGGTTGGACTTCTCTTTTTCTTCTCCATATTCTGGGGCTTCTTCCCACTGTTCAATGCCATATTTGCCTTCCCTATGGAGCGACCAATGCTAAGAAAGGAACGTTCCTCTGGCATGTATCGTCTCTCTTCCTATTACTTTGCCAGAACCGTCGGTGATTTGCCAATGGAGCTTGTGCTTCCCACTGTGTTTGTGACGGTTGCTTATTGGATGGGGGGTCTCAAGCCTTCACTAGTCACATATGGACTAACCCTCTTCATAGTTCTTTACAATGTGCTAGTCTCACAAGGCCTTGGACTAGCACTAGGTGCAATTCTAATGGATGTGAAACAGGGGACAACTCTGGCTTCAGTGACCATGTTGGTGTTTTTACTAGTAGGAGGATACTACATTCAGCACATTCCAGGTTTCATAGCTTGGTTGAAGTATATTTCTTTCAGTCATTACTGTTATAAGCTTCTTCTGGGAGTTCAATACTCGGTGAATGAAGTTTATGAGTGTGATCTGGGGGTGCGTTGCAGGGTACTTGACTATCCTGCTGTTAAGTTTATGGGTCTTGATGGTTTGTGGTCTGATGTTGCTGCTTTGGGTGTAATGCTGGTGGGTTATAGGGTTCTTGCGTATGTCGCTTTGAGGATGGGGCAACCTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

692

Amino Acids

76.98

Weight (kDa)

8.78

Isoelectric Point (pI)

34.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	112 - 262	2e-29	ABC transporter
ABC2_membrane_7	PF19055	291 - 355	1.2e-09	ABC-2 type transporter
ABC2_membrane	PF01061	428 - 634	9.8e-44	ABC-2 type transporter
ABC2_membrane_3	PF12698	479 - 683	1.1e-08	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012241)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25620 AT3G25620
fragaria_vesca	FvH4_4g28360 FvH4_4g28360
malus_domestica	MD13G1049400.v1.1 MD16G1050400.v1.1
prunus_persica	Prupe.1G302500_v2.0.a1
pyrus_communis	pycom13g04360 pycom16g04430
rosa_chinensis	RchiOBHm_Chr4g0436231
rosa_laevigata	RLG00000006527
rosa_multiflora	Rmu_sc0007205.1_g000016
rosa_roxburghii	Rroxscaffold_5G00377420
rosa_rugosa	Rorug04G0292700
rosa_samantha	Rh4AG346900 Rh4BG355900 Rh4CG370500 Rh4DG349600
rosa_wichuraiana	Rw4G030320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1878
AatII	GACGTC	1 cut(s)	255
Acc36I	ACCTGC	3 cut(s)	69, 876, 944
AccB1I	GGYRCC	2 cut(s)	154, 930
AccB7I	CCANNNNNTGG	2 cut(s)	1278, 1458
AccII	CGCG	2 cut(s)	148, 216
AciI	CCGC	8 cut(s)	8, 146, 399, 429, 433, 573, 681, 945
AclI	AACGTT	1 cut(s)	1528
AcoI	YGGCCR	2 cut(s)	430, 472
AcuI	CTGAAG	1 cut(s)	1758
AcyI	GRCGYC	1 cut(s)	252
AdeI	CACNNNGTG	1 cut(s)	1733
AfaI	GTAC	2 cut(s)	190, 1950
AfiI	CCNNNNNNNGG	8 cut(s)	125, 151, 284, 439, 582, 785, 1278, 1458
AflII	CTTAAG	1 cut(s)	239
AgsI	TTSAA	8 cut(s)	1003, 1174, 1227, 1291, 1315, 1480, 1849, 1898
AhlI	ACTAGT	2 cut(s)	1657, 1798
AjiI	CACGTC	1 cut(s)	182
AjnI	CCWGG	2 cut(s)	1425, 1828
Alw21I	GWGCWC	3 cut(s)	372, 555, 648
Alw26I	GTCTC	4 cut(s)	623, 1553, 1649, 1711
AlwNI	CAGNNNCTG	1 cut(s)	1135
Ama87I	CYCGRG	3 cut(s)	647, 784, 1339
AoxI	GGCC	7 cut(s)	386, 430, 472, 624, 683, 1384, 1714
ApaI	GGGCCC	1 cut(s)	390
ApeKI	GCWGC	5 cut(s)	396, 595, 691, 826, 2006
AspLEI	GCGC	4 cut(s)	216, 228, 808, 831
AspS9I	GGNCC	4 cut(s)	386, 387, 683, 978
AsuC2I	CCSGG	3 cut(s)	363, 441, 1016
AsuHPI	GGTGA	6 cut(s)	247, 355, 760, 853, 1592, 1918
AsuII	TTCGAA	1 cut(s)	246
AvaI	CYCGRG	3 cut(s)	647, 784, 1339
AvaII	GGWCC	1 cut(s)	978
BaeGI	GKGCMC	2 cut(s)	390, 935
BalI	TGGCCA	1 cut(s)	474
BanI	GGYRCC	2 cut(s)	154, 930
BanII	GRGCYC	5 cut(s)	372, 390, 648, 702, 792
BbsI	GAAGAC	1 cut(s)	255
Bbv12I	GWGCWC	3 cut(s)	372, 555, 648
BbvI	GCAGC	5 cut(s)	408, 607, 678, 813, 1993
BccI	CCATC	4 cut(s)	875, 1630, 1979, 2056
BceAI	ACGGC	3 cut(s)	435, 819, 862
BcgI	CGANNNNNNTGC	4 cut(s)	104, 138, 938, 972
BciT130I	CCWGG	2 cut(s)	1427, 1830
BciVI	GTATCC	1 cut(s)	1802
BclI	TGATCA	2 cut(s)	858, 1072
BcnI	CCSGG	3 cut(s)	363, 441, 1016
BcoDI	GTCTC	4 cut(s)	623, 1553, 1649, 1711
BcuI	ACTAGT	2 cut(s)	1657, 1798
BfaI	CTAG	6 cut(s)	57, 1658, 1703, 1724, 1730, 1799
BfmI	CTRYAG	1 cut(s)	259
BfrI	CTTAAG	1 cut(s)	239
BfuAI	ACCTGC	3 cut(s)	69, 876, 944
BfuI	GTATCC	1 cut(s)	1802
BisI	GCNGC	8 cut(s)	397, 400, 430, 433, 596, 692, 827, 2007
BlpI	GCTNAGC	1 cut(s)	599
BlsI	GCNGC	8 cut(s)	398, 401, 431, 434, 597, 693, 828, 2008
Bme1390I	CCNGG	5 cut(s)	363, 441, 1016, 1427, 1830
Bme18I	GGWCC	1 cut(s)	978
BmeT110I	CYCGRG	3 cut(s)	647, 784, 1339
BmgBI	CACGTC	1 cut(s)	182
BmgT120I	GGNCC	4 cut(s)	386, 387, 683, 978
BmiI	GGNNCC	6 cut(s)	156, 276, 387, 388, 932, 979
BmrFI	CCNGG	5 cut(s)	363, 441, 1016, 1427, 1830
BmsI	GCATC	3 cut(s)	732, 817, 1048
BpiI	GAAGAC	1 cut(s)	255
BplI	GAGNNNNNCTC	4 cut(s)	178, 210, 767, 799
BpmI	CTGGAG	2 cut(s)	293, 1100
Bpu1102I	GCTNAGC	1 cut(s)	599
Bpu14I	TTCGAA	1 cut(s)	246
BpuEI	CTTGAG	2 cut(s)	469, 1631
BpuMI	CCSGG	3 cut(s)	363, 441, 1016
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	1 cut(s)	1649
BsaJI	CCNNGG	4 cut(s)	362, 783, 801, 1717
BsaWI	WCCGGW	1 cut(s)	157
BsaXI	ACNNNNNCTCC	2 cut(s)	635, 665
Bsc4I	CCNNNNNNNGG	8 cut(s)	125, 151, 284, 439, 582, 785, 1278, 1458
Bse118I	RCCGGY	1 cut(s)	506
Bse1I	ACTGG	2 cut(s)	840, 1083
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	2 cut(s)	1427, 1830
BseDI	CCNNGG	4 cut(s)	362, 783, 801, 1717
BseGI	GGATG	7 cut(s)	166, 867, 903, 1238, 1641, 1753, 2067
BseLI	CCNNNNNNNGG	8 cut(s)	125, 151, 284, 439, 582, 785, 1278, 1458
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	6 cut(s)	75, 590, 717, 1295, 1395, 1416
BseNI	ACTGG	2 cut(s)	840, 1083
BseRI	GAGGAG	1 cut(s)	362
BseSI	GKGCMC	2 cut(s)	390, 935
BseX3I	CGGCCG	1 cut(s)	430
BseXI	GCAGC	5 cut(s)	408, 607, 678, 813, 1993
BseYI	CCCAGC	3 cut(s)	102, 382, 1204
Bsh1236I	CGCG	2 cut(s)	148, 216
Bsh1285I	CGRYCG	2 cut(s)	362, 433
BshFI	GGCC	7 cut(s)	388, 432, 474, 626, 685, 1386, 1716
BshNI	GGYRCC	2 cut(s)	154, 930
BsiEI	CGRYCG	2 cut(s)	362, 433
BsiHKAI	GWGCWC	3 cut(s)	372, 555, 648
BsiHKCI	CYCGRG	3 cut(s)	647, 784, 1339
BsiSI	CCGG	9 cut(s)	11, 158, 170, 362, 393, 440, 453, 507, 1016
BslFI	GGGAC	2 cut(s)	205, 1774
BslI	CCNNNNNNNGG	8 cut(s)	125, 151, 284, 439, 582, 785, 1278, 1458
BsmAI	GTCTC	4 cut(s)	623, 1553, 1649, 1711
BsmBI	CGTCTC	2 cut(s)	623, 1553
BsmFI	GGGAC	2 cut(s)	205, 1774
BsnI	GGCC	7 cut(s)	388, 432, 474, 626, 685, 1386, 1716
Bso31I	GGTCTC	1 cut(s)	1649
BsoBI	CYCGRG	3 cut(s)	647, 784, 1339
Bsp119I	TTCGAA	1 cut(s)	246
Bsp120I	GGGCCC	1 cut(s)	386
Bsp1286I	GDGCHC	7 cut(s)	372, 390, 555, 648, 702, 792, 935
Bsp143I	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
Bsp1720I	GCTNAGC	1 cut(s)	599
BspACI	CCGC	8 cut(s)	8, 146, 399, 429, 433, 573, 681, 945
BspANI	GGCC	7 cut(s)	388, 432, 474, 626, 685, 1386, 1716
BspCNI	CTCAG	6 cut(s)	76, 591, 716, 1296, 1394, 1415
BspFNI	CGCG	2 cut(s)	148, 216
BspLI	GGNNCC	6 cut(s)	156, 276, 387, 388, 932, 979
BspMI	ACCTGC	3 cut(s)	69, 876, 944
BspT104I	TTCGAA	1 cut(s)	246
BspT107I	GGYRCC	2 cut(s)	154, 930
BspTI	CTTAAG	1 cut(s)	239
BspTNI	GGTCTC	1 cut(s)	1649
BsrDI	GCAATG	1 cut(s)	384
BsrFI	RCCGGY	1 cut(s)	506
BsrI	ACTGG	2 cut(s)	840, 1083
BssAI	RCCGGY	1 cut(s)	506
BssECI	CCNNGG	4 cut(s)	362, 783, 801, 1717
BssMI	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
BssNI	GRCGYC	1 cut(s)	252
BssT1I	CCWWGG	1 cut(s)	1717
Bst2UI	CCWGG	2 cut(s)	1427, 1830
Bst6I	CTCTTC	3 cut(s)	603, 1558, 1685
BstACI	GRCGYC	1 cut(s)	252
BstAFI	CTTAAG	1 cut(s)	239
BstAPI	GCANNNNNTGC	3 cut(s)	742, 1058, 1733
BstBI	TTCGAA	1 cut(s)	246
BstC8I	GCNNGC	7 cut(s)	146, 437, 476, 624, 683, 947, 951
BstDEI	CTNAG	8 cut(s)	84, 599, 703, 1125, 1304, 1381, 1402, 1517
BstDSI	CCRYGG	1 cut(s)	801
BstF5I	GGATG	7 cut(s)	166, 867, 903, 1238, 1641, 1753, 2067
BstFNI	CGCG	2 cut(s)	148, 216
BstHHI	GCGC	4 cut(s)	216, 228, 808, 831
BstKTI	GATC	5 cut(s)	861, 1036, 1075, 1102, 1930
BstMAI	GTCTC	4 cut(s)	623, 1553, 1649, 1711
BstMBI	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
BstMCI	CGRYCG	2 cut(s)	362, 433
BstNI	CCWGG	2 cut(s)	1427, 1830
BstNSI	RCATGY	3 cut(s)	169, 953, 1543
BstSCI	CCNGG	5 cut(s)	361, 439, 1014, 1425, 1828
BstSFI	CTRYAG	1 cut(s)	259
BstSLI	GKGCMC	2 cut(s)	390, 935
BstUI	CGCG	2 cut(s)	148, 216
BstV1I	GCAGC	5 cut(s)	408, 607, 678, 813, 1993
BstV2I	GAAGAC	1 cut(s)	255
BstZI	CGGCCG	1 cut(s)	430
BsuI	GTATCC	1 cut(s)	1802
BsuRI	GGCC	7 cut(s)	388, 432, 474, 626, 685, 1386, 1716
BtgI	CCRYGG	1 cut(s)	801
BtrI	CACGTC	1 cut(s)	182
BtsCI	GGATG	7 cut(s)	166, 867, 903, 1238, 1641, 1753, 2067
BtsI	GCAGTG	1 cut(s)	670
BtsIMutI	CAGTG	7 cut(s)	670, 676, 861, 1472, 1608, 1782, 2074
BveI	ACCTGC	3 cut(s)	69, 876, 944
Cac8I	GCNNGC	7 cut(s)	146, 437, 476, 624, 683, 947, 951
CaiI	CAGNNNCTG	1 cut(s)	1135
CciNI	GCGGCCGC	1 cut(s)	430
CfoI	GCGC	4 cut(s)	216, 228, 808, 831
Cfr10I	RCCGGY	1 cut(s)	506
Cfr13I	GGNCC	4 cut(s)	386, 387, 683, 978
CseI	GACGC	2 cut(s)	137, 283
CsiI	ACCWGGT	1 cut(s)	1425
Csp6I	GTAC	2 cut(s)	189, 1949
CspCI	CAANNNNNGTGG	2 cut(s)	1597, 1632
CviQI	GTAC	2 cut(s)	189, 1949
DdeI	CTNAG	8 cut(s)	84, 599, 703, 1125, 1304, 1381, 1402, 1517
DpnI	GATC	5 cut(s)	860, 1035, 1074, 1101, 1929
DpnII	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
DraIII	CACNNNGTG	1 cut(s)	1733
EaeI	YGGCCR	2 cut(s)	430, 472
EagI	CGGCCG	1 cut(s)	430
Eam1104I	CTCTTC	3 cut(s)	603, 1558, 1685
EarI	CTCTTC	3 cut(s)	603, 1558, 1685
Ecl136II	GAGCTC	2 cut(s)	370, 646
EclXI	CGGCCG	1 cut(s)	430
Eco130I	CCWWGG	1 cut(s)	1717
Eco147I	AGGCCT	2 cut(s)	1386, 1716
Eco24I	GRGCYC	5 cut(s)	372, 390, 648, 702, 792
Eco31I	GGTCTC	1 cut(s)	1649
Eco32I	GATATC	1 cut(s)	1140
Eco47I	GGWCC	1 cut(s)	978
Eco52I	CGGCCG	1 cut(s)	430
Eco53kI	GAGCTC	2 cut(s)	370, 646
Eco57I	CTGAAG	1 cut(s)	1758
Eco88I	CYCGRG	3 cut(s)	647, 784, 1339
EcoICRI	GAGCTC	2 cut(s)	370, 646
EcoO109I	RGGNCCY	2 cut(s)	386, 387
EcoRII	CCWGG	2 cut(s)	1425, 1828
EcoRV	GATATC	1 cut(s)	1140
EcoT14I	CCWWGG	1 cut(s)	1717
EcoT38I	GRGCYC	5 cut(s)	372, 390, 648, 702, 792
ErhI	CCWWGG	1 cut(s)	1717
Esp3I	CGTCTC	2 cut(s)	623, 1553
FaqI	GGGAC	2 cut(s)	205, 1774
FauI	CCCGC	3 cut(s)	153, 674, 938
FauNDI	CATATG	1 cut(s)	1666
FbaI	TGATCA	2 cut(s)	858, 1072
Fnu4HI	GCNGC	8 cut(s)	397, 400, 430, 433, 596, 692, 827, 2007
FokI	GGATG	7 cut(s)	173, 854, 910, 1225, 1648, 1760, 2074
FriOI	GRGCYC	5 cut(s)	372, 390, 648, 702, 792
Fsp4HI	GCNGC	8 cut(s)	397, 400, 430, 433, 596, 692, 827, 2007
FspBI	CTAG	6 cut(s)	57, 1658, 1703, 1724, 1730, 1799
GlaI	GCGC	4 cut(s)	215, 227, 807, 830
GluI	GCNGC	8 cut(s)	397, 400, 430, 433, 596, 692, 827, 2007
GsaI	CCCAGC	3 cut(s)	106, 386, 1208
GsuI	CTGGAG	2 cut(s)	293, 1100
HaeIII	GGCC	7 cut(s)	388, 432, 474, 626, 685, 1386, 1716
HapII	CCGG	9 cut(s)	11, 158, 170, 362, 393, 440, 453, 507, 1016
HgaI	GACGC	2 cut(s)	137, 283
HhaI	GCGC	4 cut(s)	216, 228, 808, 831
Hin1I	GRCGYC	1 cut(s)	252
Hin6I	GCGC	4 cut(s)	214, 226, 806, 829
HinP1I	GCGC	4 cut(s)	214, 226, 806, 829
HincII	GTYRAC	1 cut(s)	654
HindII	GTYRAC	1 cut(s)	654
HindIII	AAGCTT	1 cut(s)	1880
HinfI	GANTC	4 cut(s)	218, 794, 1183, 1331
HpaII	CCGG	9 cut(s)	11, 158, 170, 362, 393, 440, 453, 507, 1016
HphI	GGTGA	6 cut(s)	247, 355, 760, 853, 1592, 1918
Hpy166II	GTNNAC	2 cut(s)	654, 751
Hpy188I	TCNGA	9 cut(s)	85, 96, 186, 546, 925, 1137, 1305, 1405, 1999
Hpy188III	TCNNGA	6 cut(s)	415, 1106, 1227, 1242, 1253, 1982
Hpy8I	GTNNAC	2 cut(s)	654, 751
Hpy99I	CGWCG	1 cut(s)	1580
HpyAV	CCTTC	3 cut(s)	1168, 1504, 1662
HpyCH4IV	ACGT	3 cut(s)	181, 252, 1528
HpyCH4V	TGCA	7 cut(s)	663, 953, 1169, 1373, 1420, 1736, 1944
HpyF3I	CTNAG	8 cut(s)	84, 599, 703, 1125, 1304, 1381, 1402, 1517
HpySE526I	ACGT	3 cut(s)	181, 252, 1528
Hsp92I	GRCGYC	1 cut(s)	252
HspAI	GCGC	4 cut(s)	214, 226, 806, 829
Ksp22I	TGATCA	2 cut(s)	858, 1072
Kzo9I	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
LmnI	GCTCC	9 cut(s)	13, 274, 367, 375, 494, 643, 1282, 1504, 1594
Lsp1109I	GCAGC	5 cut(s)	408, 607, 678, 813, 1993
LweI	GCATC	3 cut(s)	732, 817, 1048
MabI	ACCWGGT	1 cut(s)	1425
MaeI	CTAG	6 cut(s)	57, 1658, 1703, 1724, 1730, 1799
MaeII	ACGT	3 cut(s)	181, 252, 1528
MaeIII	GTNAC	9 cut(s)	232, 253, 295, 460, 514, 665, 1618, 1660, 1777
MalI	GATC	5 cut(s)	860, 1035, 1074, 1101, 1929
MboI	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
MhlI	GDGCHC	7 cut(s)	372, 390, 555, 648, 702, 792, 935
MlsI	TGGCCA	1 cut(s)	474
MluCI	AATT	5 cut(s)	88, 1003, 1286, 1374, 1737
MluNI	TGGCCA	1 cut(s)	474
MlyI	GAGTC	2 cut(s)	227, 788
MmeI	TCCRAC	3 cut(s)	68, 903, 1411
Mox20I	TGGCCA	1 cut(s)	474
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	4 cut(s)	240, 267, 1346, 1968
MslI	CAYNNNNRTG	1 cut(s)	1787
Msp20I	TGGCCA	1 cut(s)	474
MspA1I	CMGCKG	5 cut(s)	399, 598, 945, 1208, 1275
MspCI	CTTAAG	1 cut(s)	239
MspI	CCGG	9 cut(s)	11, 158, 170, 362, 393, 440, 453, 507, 1016
MspR9I	CCNGG	5 cut(s)	363, 441, 1016, 1427, 1830
MvaI	CCWGG	2 cut(s)	1427, 1830
MvnI	CGCG	2 cut(s)	148, 216
NciI	CCSGG	3 cut(s)	363, 441, 1016
NdeI	CATATG	1 cut(s)	1666
NdeII	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
NlaIV	GGNNCC	6 cut(s)	156, 276, 387, 388, 932, 979
NmeAIII	GCCGAG	2 cut(s)	405, 652
NmuCI	GTSAC	9 cut(s)	232, 253, 295, 460, 514, 665, 1618, 1660, 1777
NotI	GCGGCCGC	1 cut(s)	430
NspI	RCATGY	3 cut(s)	169, 953, 1543
NspV	TTCGAA	1 cut(s)	246
PaeI	GCATGC	1 cut(s)	953
PceI	AGGCCT	2 cut(s)	1386, 1716
PfeI	GAWTC	2 cut(s)	1183, 1331
PflMI	CCANNNNNTGG	2 cut(s)	1278, 1458
PkrI	GCNGC	8 cut(s)	398, 401, 431, 434, 597, 693, 828, 2008
PleI	GAGTC	2 cut(s)	226, 788
PpsI	GAGTC	2 cut(s)	226, 788
PsiI	TTATAA	1 cut(s)	1878
Psp124BI	GAGCTC	2 cut(s)	372, 648
Psp1406I	AACGTT	1 cut(s)	1528
Psp6I	CCWGG	2 cut(s)	1425, 1828
PspFI	CCCAGC	3 cut(s)	102, 382, 1204
PspGI	CCWGG	2 cut(s)	1425, 1828
PspN4I	GGNNCC	6 cut(s)	156, 276, 387, 388, 932, 979
PspOMI	GGGCCC	1 cut(s)	386
PspPI	GGNCC	4 cut(s)	386, 387, 683, 978
PstNI	CAGNNNCTG	1 cut(s)	1135
PvuII	CAGCTG	3 cut(s)	598, 1208, 1275
RsaI	GTAC	2 cut(s)	190, 1950
RsaNI	GTAC	2 cut(s)	189, 1949
RseI	CAYNNNNRTG	1 cut(s)	1787
SacI	GAGCTC	2 cut(s)	372, 648
SaqAI	TTAA	4 cut(s)	240, 267, 1346, 1968
SatI	GCNGC	8 cut(s)	397, 400, 430, 433, 596, 692, 827, 2007
Sau3AI	GATC	5 cut(s)	858, 1033, 1072, 1099, 1927
Sau96I	GGNCC	4 cut(s)	386, 387, 683, 978
SchI	GAGTC	2 cut(s)	227, 788
ScrFI	CCNGG	5 cut(s)	363, 441, 1016, 1427, 1830
SduI	GDGCHC	7 cut(s)	372, 390, 555, 648, 702, 792, 935
SexAI	ACCWGGT	1 cut(s)	1425
SfaNI	GCATC	3 cut(s)	732, 817, 1048
SfcI	CTRYAG	1 cut(s)	259
SfuI	TTCGAA	1 cut(s)	246
SinI	GGWCC	1 cut(s)	978
SmiMI	CAYNNNNRTG	1 cut(s)	1787
SmlI	CTYRAG	3 cut(s)	239, 484, 1646
SmoI	CTYRAG	3 cut(s)	239, 484, 1646
SpeI	ACTAGT	2 cut(s)	1657, 1798
SphI	GCATGC	1 cut(s)	953
Sse9I	AATT	5 cut(s)	88, 1003, 1286, 1374, 1737
SseBI	AGGCCT	2 cut(s)	1386, 1716
SsiI	CCGC	8 cut(s)	8, 146, 399, 429, 433, 573, 681, 945
SspMI	CTAG	6 cut(s)	57, 1658, 1703, 1724, 1730, 1799
SstI	GAGCTC	2 cut(s)	372, 648
StuI	AGGCCT	2 cut(s)	1386, 1716
StyD4I	CCNGG	5 cut(s)	361, 439, 1014, 1425, 1828
StyI	CCWWGG	1 cut(s)	1717
TaiI	ACGT	3 cut(s)	184, 255, 1531
TaqI	TCGA	4 cut(s)	246, 555, 792, 1252
TasI	AATT	5 cut(s)	88, 1003, 1286, 1374, 1737
TauI	GCSGC	3 cut(s)	402, 432, 435
TfiI	GAWTC	2 cut(s)	1183, 1331
Tru1I	TTAA	4 cut(s)	240, 267, 1346, 1968
Tru9I	TTAA	4 cut(s)	240, 267, 1346, 1968
TscAI	CASTG	6 cut(s)	670, 676, 861, 1479, 1615, 1782
TseFI	GTSAC	9 cut(s)	232, 253, 295, 460, 514, 665, 1618, 1660, 1777
TseI	GCWGC	5 cut(s)	396, 595, 691, 826, 2006
Tsp45I	GTSAC	9 cut(s)	232, 253, 295, 460, 514, 665, 1618, 1660, 1777
TspDTI	ATGAA	8 cut(s)	98, 291, 509, 997, 1344, 1672, 1825, 1926
TspGWI	ACGGA	3 cut(s)	153, 196, 970
TspRI	CASTG	6 cut(s)	670, 676, 861, 1479, 1615, 1782
Van91I	CCANNNNNTGG	2 cut(s)	1278, 1458
Vha464I	CTTAAG	1 cut(s)	239
VpaK11BI	GGWCC	1 cut(s)	978
XceI	RCATGY	3 cut(s)	169, 953, 1543
XspI	CTAG	6 cut(s)	57, 1658, 1703, 1724, 1730, 1799
ZraI	GACGTC	1 cut(s)	253

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.