Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0012241

Physical Location & Seq

Genomic Coordinates Forward (+)

57126679 .. 57130837

Gene Structure 4159 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG349600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGCTGGGGCCCTCCGGCAGCGGCAAGACCACTCTCTTGACGGCACTGGGCGGCCGCTTGCCGGGAAAAATCTCCGGCAAAGTGACCTACAATGGCCAGCATTTCTCAAGCTCCATGAAGCACAACACCGGCTTTGTGACGCAAGATGATGTTCTATATCCTCATCTGACTGTGCTCGAAACCCTAACATATACCGCCCTTTTGAGGCTTCCAAAGCAGCTGAGCAAGGAAGAGAAAAAAGAGCAGGCCGAGACGGTTATGGTGGAGCTCGGGTTGACCCGGTGCCGTGACAGTGTTATTGGCGGGCCTTTGCTGCGTGGGGTCTCGGGTGGGGAGAGGAAACGGGTCAGTATCGGGCAGGAGATGCTGGTGAACCCAAGTCTTTTGTTGCTGGACGAGCCTACCTCGGGGCTCGACTCTACCACGGCGCAGCGTATAGTTGTTACGCTGCGCCTACTGGCGAGAGGTGGGAGGACAGTGATCACCACCATCCACCAGCCGTCCAGCAGGTTGTATAGGATGTTTGATAAGGTGGTAGTTTTGTCGGACGGGTGCCCGATTTACAGCGGGCATGCAGGTCGGGTCATGGAGTATTTCGGGTCCGTTGGGTATGAGGTCGGGTTCAATTTCATCAACCCGGCTGATTTCTTGCTTGATCTTGCTAATGGTATAGCACCTGATGCTAAACAAGATGATCAACTGGAGTATAATGGCAGATTAGATCATCACGAAGAACAAAACACAACTAAGCAGTTTCTGATATCATCATATAAAAAGAACCTATACCCTGCATTGAAGGCAGAGATTCAGCAAAGTCAAAAAGACCCAGCTGTTCTTTCTTCTTCTTCAAGAACATCATCATCCAGAGGTAGTCGAGATTACGAATGGACTACCAGCTGGTGGGAGCAATTCAAGGTTTTGCTTCTGAGGGGTTTGAAAGAGAGAAAGCATGAATCTTTCTCGGGTTTAAGGATATTCCAAGTTATGTCGGTTGCAATTCTCTCAGGCCTTTGTTGGTGGCACTCAGACACTTCACATTTGCAAGACCAGGTTGGACTTCTCTTTTTCTTCTCCATATTCTGGGGCTTCTTTCCACTGTTCAATGCCATATTTGCCTTCCCTATGGAGCGACCAATGCTAAGAAAGGAACGTTCCTCTGGCATGTATCGTCTCTCTTCCTATTACTTTGCCAGAACCGTGGGTGATTTGCCAATGGAGCTTGTGCTTCCCACTGTGTTTGTGACGGTTGCTTATTGGATGGGGGGTCTCAAGCCTTCACTAGTCGCATATGGACTAACCCTCTTCATAGTTCTTTACAATGTGCTAGTCTCACAAGGCCTTGGACTAGCACTAGGTGCAATTCTAATGGATGTGAAACAGGGGACAACTCTGGCTTCAGTGACCATGTTGGTGTTTTTACTAGTAGGAGGATACTACATTCAGCACATTCCAGGTTTCATAGCTTGGTTGAAGTATATTTCTTTCAGTCATTACTGTTATAAGCTTCTTCTGGGAGTTCAATACTCGGTGAATGAAGTTTATGAGTGTGATCTGGGGATGCGTTGCAGGGTACTTGACTATCCTGCTGTTAAGTTTGTGGGTCTTGATGGTTTGTGGTCTGATGTTGCTGCTTTGGGTGTAATGCTGGTGGGTTATAGGGTTCTGGCTTATGTCGCTTTGAGGATGGGGCAACCTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

566

Amino Acids

63.24

Weight (kDa)

8.94

Isoelectric Point (pI)

31.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	1 - 136	1.3e-24	ABC transporter
ABC2_membrane_7	PF19055	165 - 229	9.4e-10	ABC-2 type transporter
ABC2_membrane	PF01061	302 - 508	4.5e-44	ABC-2 type transporter
ABC2_membrane_3	PF12698	353 - 557	3.9e-09	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012241)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25620 AT3G25620
fragaria_vesca	FvH4_4g28360 FvH4_4g28360
malus_domestica	MD13G1049400.v1.1 MD16G1050400.v1.1
prunus_persica	Prupe.1G302500_v2.0.a1
pyrus_communis	pycom13g04360 pycom16g04430
rosa_chinensis	RchiOBHm_Chr4g0436231
rosa_laevigata	RLG00000006527
rosa_multiflora	Rmu_sc0007205.1_g000016
rosa_roxburghii	Rroxscaffold_5G00377420
rosa_rugosa	Rorug04G0292700
rosa_samantha	Rh4AG346900 Rh4BG355900 Rh4CG370500 Rh4DG349600
rosa_wichuraiana	Rw4G030320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1500
Acc36I	ACCTGC	2 cut(s)	498, 566
AccB1I	GGYRCC	2 cut(s)	282, 552
AccB7I	CCANNNNNTGG	2 cut(s)	900, 1080
AciI	CCGC	6 cut(s)	21, 51, 55, 195, 303, 567
AclI	AACGTT	1 cut(s)	1150
AcoI	YGGCCR	2 cut(s)	52, 94
AcuI	CTGAAG	1 cut(s)	1380
AdeI	CACNNNGTG	1 cut(s)	1355
AfaI	GTAC	1 cut(s)	1572
AfiI	CCNNNNNNNGG	5 cut(s)	61, 204, 407, 900, 1080
AgsI	TTSAA	8 cut(s)	625, 796, 849, 913, 937, 1102, 1471, 1520
AhlI	ACTAGT	2 cut(s)	1279, 1420
AjnI	CCWGG	2 cut(s)	1047, 1450
AluBI	AGCT	8 cut(s)	111, 220, 268, 830, 897, 1219, 1463, 1504
AluI	AGCT	8 cut(s)	111, 220, 268, 830, 897, 1219, 1463, 1504
Alw21I	GWGCWC	2 cut(s)	177, 270
Alw26I	GTCTC	5 cut(s)	245, 328, 1175, 1271, 1333
AlwNI	CAGNNNCTG	1 cut(s)	757
Ama87I	CYCGRG	4 cut(s)	269, 325, 406, 961
AoxI	GGCC	7 cut(s)	8, 52, 94, 246, 305, 1006, 1336
ApaI	GGGCCC	1 cut(s)	12
ApeKI	GCWGC	6 cut(s)	18, 217, 313, 430, 448, 1628
AspLEI	GCGC	2 cut(s)	430, 453
AspS9I	GGNCC	4 cut(s)	8, 9, 305, 600
AsuC2I	CCSGG	3 cut(s)	63, 280, 638
AsuHPI	GGTGA	4 cut(s)	382, 475, 1214, 1540
AvaI	CYCGRG	4 cut(s)	269, 325, 406, 961
AvaII	GGWCC	1 cut(s)	600
BaeGI	GKGCMC	2 cut(s)	12, 557
BalI	TGGCCA	1 cut(s)	96
BanI	GGYRCC	2 cut(s)	282, 552
BanII	GRGCYC	3 cut(s)	12, 270, 414
Bbv12I	GWGCWC	2 cut(s)	177, 270
BbvI	GCAGC	6 cut(s)	30, 229, 300, 435, 442, 1615
BccI	CCATC	4 cut(s)	497, 1252, 1601, 1678
BceAI	ACGGC	4 cut(s)	57, 270, 441, 484
BcgI	CGANNNNNNTGC	2 cut(s)	560, 594
BciT130I	CCWGG	2 cut(s)	1049, 1452
BciVI	GTATCC	1 cut(s)	1424
BclI	TGATCA	2 cut(s)	480, 694
BcnI	CCSGG	3 cut(s)	63, 280, 638
BcoDI	GTCTC	5 cut(s)	245, 328, 1175, 1271, 1333
BcuI	ACTAGT	2 cut(s)	1279, 1420
BfaI	CTAG	5 cut(s)	1280, 1325, 1346, 1352, 1421
BfuAI	ACCTGC	2 cut(s)	498, 566
BfuI	GTATCC	1 cut(s)	1424
BisI	GCNGC	9 cut(s)	19, 22, 52, 55, 218, 314, 431, 449, 1629
BlpI	GCTNAGC	1 cut(s)	221
BlsI	GCNGC	9 cut(s)	20, 23, 53, 56, 219, 315, 432, 450, 1630
Bme1390I	CCNGG	5 cut(s)	63, 280, 638, 1049, 1452
Bme18I	GGWCC	1 cut(s)	600
BmeT110I	CYCGRG	4 cut(s)	269, 325, 406, 961
BmgT120I	GGNCC	4 cut(s)	8, 9, 305, 600
BmiI	GGNNCC	5 cut(s)	9, 10, 284, 554, 601
BmrFI	CCNGG	5 cut(s)	63, 280, 638, 1049, 1452
BmrI	ACTGGG	1 cut(s)	56
BmsI	GCATC	3 cut(s)	354, 670, 1548
BmuI	ACTGGG	1 cut(s)	56
BplI	GAGNNNNNCTC	2 cut(s)	389, 421
BpmI	CTGGAG	1 cut(s)	722
Bpu1102I	GCTNAGC	1 cut(s)	221
BpuEI	CTTGAG	2 cut(s)	91, 1253
BpuMI	CCSGG	3 cut(s)	63, 280, 638
BsaI	GGTCTC	2 cut(s)	328, 1271
BsaJI	CCNNGG	4 cut(s)	405, 423, 1197, 1339
BsaXI	ACNNNNNCTCC	2 cut(s)	257, 287
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 204, 407, 900, 1080
Bse118I	RCCGGY	1 cut(s)	128
Bse1I	ACTGG	3 cut(s)	51, 462, 705
BseBI	CCWGG	2 cut(s)	1049, 1452
BseDI	CCNNGG	4 cut(s)	405, 423, 1197, 1339
BseGI	GGATG	7 cut(s)	489, 525, 860, 1263, 1375, 1563, 1689
BseLI	CCNNNNNNNGG	5 cut(s)	61, 204, 407, 900, 1080
BseMII	CTCAG	4 cut(s)	212, 917, 1017, 1038
BseNI	ACTGG	3 cut(s)	51, 462, 705
BseSI	GKGCMC	2 cut(s)	12, 557
BseX3I	CGGCCG	1 cut(s)	52
BseXI	GCAGC	6 cut(s)	30, 229, 300, 435, 442, 1615
BseYI	CCCAGC	2 cut(s)	4, 826
Bsh1285I	CGRYCG	1 cut(s)	55
BshFI	GGCC	7 cut(s)	10, 54, 96, 248, 307, 1008, 1338
BshNI	GGYRCC	2 cut(s)	282, 552
BsiEI	CGRYCG	1 cut(s)	55
BsiHKAI	GWGCWC	2 cut(s)	177, 270
BsiHKCI	CYCGRG	4 cut(s)	269, 325, 406, 961
BsiSI	CCGG	6 cut(s)	15, 62, 75, 129, 280, 638
BslFI	GGGAC	1 cut(s)	1396
BslI	CCNNNNNNNGG	5 cut(s)	61, 204, 407, 900, 1080
BsmAI	GTCTC	5 cut(s)	245, 328, 1175, 1271, 1333
BsmBI	CGTCTC	2 cut(s)	245, 1175
BsmFI	GGGAC	1 cut(s)	1396
BsnI	GGCC	7 cut(s)	10, 54, 96, 248, 307, 1008, 1338
Bso31I	GGTCTC	2 cut(s)	328, 1271
BsoBI	CYCGRG	4 cut(s)	269, 325, 406, 961
Bsp120I	GGGCCC	1 cut(s)	8
Bsp1286I	GDGCHC	5 cut(s)	12, 177, 270, 414, 557
Bsp143I	GATC	5 cut(s)	480, 655, 694, 721, 1549
Bsp1720I	GCTNAGC	1 cut(s)	221
BspACI	CCGC	6 cut(s)	21, 51, 55, 195, 303, 567
BspANI	GGCC	7 cut(s)	10, 54, 96, 248, 307, 1008, 1338
BspCNI	CTCAG	4 cut(s)	213, 918, 1016, 1037
BspLI	GGNNCC	5 cut(s)	9, 10, 284, 554, 601
BspMI	ACCTGC	2 cut(s)	498, 566
BspT107I	GGYRCC	2 cut(s)	282, 552
BspTNI	GGTCTC	2 cut(s)	328, 1271
BsrFI	RCCGGY	1 cut(s)	128
BsrI	ACTGG	3 cut(s)	51, 462, 705
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	4 cut(s)	405, 423, 1197, 1339
BssMI	GATC	5 cut(s)	480, 655, 694, 721, 1549
BssT1I	CCWWGG	1 cut(s)	1339
Bst2UI	CCWGG	2 cut(s)	1049, 1452
Bst4CI	ACNGT	9 cut(s)	172, 256, 293, 478, 1098, 1198, 1234, 1246, 1496
Bst6I	CTCTTC	3 cut(s)	225, 1180, 1307
BstAPI	GCANNNNNTGC	3 cut(s)	364, 680, 1355
BstC8I	GCNNGC	6 cut(s)	59, 98, 246, 305, 569, 573
BstDEI	CTNAG	6 cut(s)	221, 747, 926, 1003, 1024, 1139
BstDSI	CCRYGG	2 cut(s)	423, 1197
BstF5I	GGATG	7 cut(s)	489, 525, 860, 1263, 1375, 1563, 1689
BstHHI	GCGC	2 cut(s)	430, 453
BstKTI	GATC	5 cut(s)	483, 658, 697, 724, 1552
BstMAI	GTCTC	5 cut(s)	245, 328, 1175, 1271, 1333
BstMBI	GATC	5 cut(s)	480, 655, 694, 721, 1549
BstMCI	CGRYCG	1 cut(s)	55
BstNI	CCWGG	2 cut(s)	1049, 1452
BstNSI	RCATGY	2 cut(s)	575, 1165
BstSCI	CCNGG	5 cut(s)	61, 278, 636, 1047, 1450
BstSLI	GKGCMC	2 cut(s)	12, 557
BstV1I	GCAGC	6 cut(s)	30, 229, 300, 435, 442, 1615
BstXI	CCANNNNNNTGG	1 cut(s)	1198
BstZI	CGGCCG	1 cut(s)	52
BsuI	GTATCC	1 cut(s)	1424
BsuRI	GGCC	7 cut(s)	10, 54, 96, 248, 307, 1008, 1338
BtgI	CCRYGG	2 cut(s)	423, 1197
BtsCI	GGATG	7 cut(s)	489, 525, 860, 1263, 1375, 1563, 1689
BtsIMutI	CAGTG	7 cut(s)	44, 298, 483, 1094, 1230, 1404, 1696
BveI	ACCTGC	2 cut(s)	498, 566
Cac8I	GCNNGC	6 cut(s)	59, 98, 246, 305, 569, 573
CaiI	CAGNNNCTG	1 cut(s)	757
CciNI	GCGGCCGC	1 cut(s)	52
CfoI	GCGC	2 cut(s)	430, 453
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	4 cut(s)	8, 9, 305, 600
CseI	GACGC	1 cut(s)	148
CsiI	ACCWGGT	1 cut(s)	1047
Csp6I	GTAC	1 cut(s)	1571
CspCI	CAANNNNNGTGG	2 cut(s)	1219, 1254
CviAII	CATG	6 cut(s)	115, 572, 586, 950, 1162, 1405
CviQI	GTAC	1 cut(s)	1571
DdeI	CTNAG	6 cut(s)	221, 747, 926, 1003, 1024, 1139
DpnI	GATC	5 cut(s)	482, 657, 696, 723, 1551
DpnII	GATC	5 cut(s)	480, 655, 694, 721, 1549
DraIII	CACNNNGTG	1 cut(s)	1355
EaeI	YGGCCR	2 cut(s)	52, 94
EagI	CGGCCG	1 cut(s)	52
Eam1104I	CTCTTC	3 cut(s)	225, 1180, 1307
EarI	CTCTTC	3 cut(s)	225, 1180, 1307
Ecl136II	GAGCTC	1 cut(s)	268
EclXI	CGGCCG	1 cut(s)	52
Eco130I	CCWWGG	1 cut(s)	1339
Eco147I	AGGCCT	2 cut(s)	1008, 1338
Eco24I	GRGCYC	3 cut(s)	12, 270, 414
Eco31I	GGTCTC	2 cut(s)	328, 1271
Eco32I	GATATC	1 cut(s)	762
Eco47I	GGWCC	1 cut(s)	600
Eco52I	CGGCCG	1 cut(s)	52
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	1 cut(s)	1380
Eco88I	CYCGRG	4 cut(s)	269, 325, 406, 961
EcoICRI	GAGCTC	1 cut(s)	268
EcoO109I	RGGNCCY	2 cut(s)	8, 9
EcoRII	CCWGG	2 cut(s)	1047, 1450
EcoRV	GATATC	1 cut(s)	762
EcoT14I	CCWWGG	1 cut(s)	1339
EcoT38I	GRGCYC	3 cut(s)	12, 270, 414
ErhI	CCWWGG	1 cut(s)	1339
Esp3I	CGTCTC	2 cut(s)	245, 1175
FaeI	CATG	6 cut(s)	118, 575, 589, 953, 1165, 1408
FaqI	GGGAC	1 cut(s)	1396
FatI	CATG	6 cut(s)	114, 571, 585, 949, 1161, 1404
FauI	CCCGC	2 cut(s)	296, 560
FauNDI	CATATG	1 cut(s)	1288
FbaI	TGATCA	2 cut(s)	480, 694
Fnu4HI	GCNGC	9 cut(s)	19, 22, 52, 55, 218, 314, 431, 449, 1629
FokI	GGATG	7 cut(s)	476, 532, 847, 1270, 1382, 1570, 1696
FriOI	GRGCYC	3 cut(s)	12, 270, 414
Fsp4HI	GCNGC	9 cut(s)	19, 22, 52, 55, 218, 314, 431, 449, 1629
FspBI	CTAG	5 cut(s)	1280, 1325, 1346, 1352, 1421
GlaI	GCGC	2 cut(s)	429, 452
GluI	GCNGC	9 cut(s)	19, 22, 52, 55, 218, 314, 431, 449, 1629
GsaI	CCCAGC	2 cut(s)	8, 830
GsuI	CTGGAG	1 cut(s)	722
HaeIII	GGCC	7 cut(s)	10, 54, 96, 248, 307, 1008, 1338
HapII	CCGG	6 cut(s)	15, 62, 75, 129, 280, 638
HgaI	GACGC	1 cut(s)	148
HhaI	GCGC	2 cut(s)	430, 453
Hin1II	CATG	6 cut(s)	118, 575, 589, 953, 1165, 1408
Hin6I	GCGC	2 cut(s)	428, 451
HinP1I	GCGC	2 cut(s)	428, 451
HincII	GTYRAC	1 cut(s)	276
HindII	GTYRAC	1 cut(s)	276
HindIII	AAGCTT	1 cut(s)	1502
HinfI	GANTC	3 cut(s)	416, 805, 953
HpaII	CCGG	6 cut(s)	15, 62, 75, 129, 280, 638
HphI	GGTGA	4 cut(s)	382, 475, 1214, 1540
Hpy166II	GTNNAC	2 cut(s)	276, 373
Hpy188I	TCNGA	6 cut(s)	168, 547, 759, 927, 1027, 1621
Hpy188III	TCNNGA	6 cut(s)	37, 728, 849, 864, 875, 1604
Hpy8I	GTNNAC	2 cut(s)	276, 373
HpyAV	CCTTC	3 cut(s)	790, 1126, 1284
HpyCH4III	ACNGT	9 cut(s)	172, 256, 293, 478, 1098, 1198, 1234, 1246, 1496
HpyCH4IV	ACGT	1 cut(s)	1150
HpyCH4V	TGCA	6 cut(s)	575, 791, 995, 1042, 1358, 1566
HpyF3I	CTNAG	6 cut(s)	221, 747, 926, 1003, 1024, 1139
HpySE526I	ACGT	1 cut(s)	1150
Hsp92II	CATG	6 cut(s)	118, 575, 589, 953, 1165, 1408
HspAI	GCGC	2 cut(s)	428, 451
Ksp22I	TGATCA	2 cut(s)	480, 694
Kzo9I	GATC	5 cut(s)	480, 655, 694, 721, 1549
LmnI	GCTCC	5 cut(s)	116, 265, 904, 1126, 1216
Lsp1109I	GCAGC	6 cut(s)	30, 229, 300, 435, 442, 1615
LweI	GCATC	3 cut(s)	354, 670, 1548
MabI	ACCWGGT	1 cut(s)	1047
MaeI	CTAG	5 cut(s)	1280, 1325, 1346, 1352, 1421
MaeII	ACGT	1 cut(s)	1150
MaeIII	GTNAC	6 cut(s)	82, 136, 287, 442, 1240, 1399
MalI	GATC	5 cut(s)	482, 657, 696, 723, 1551
MboI	GATC	5 cut(s)	480, 655, 694, 721, 1549
MboII	GAAGA	9 cut(s)	242, 743, 831, 834, 837, 1060, 1167, 1294, 1499
MhlI	GDGCHC	5 cut(s)	12, 177, 270, 414, 557
MlsI	TGGCCA	1 cut(s)	96
MluCI	AATT	4 cut(s)	625, 908, 996, 1359
MluNI	TGGCCA	1 cut(s)	96
MlyI	GAGTC	1 cut(s)	410
MmeI	TCCRAC	2 cut(s)	525, 1033
Mox20I	TGGCCA	1 cut(s)	96
MscI	TGGCCA	1 cut(s)	96
MseI	TTAA	2 cut(s)	968, 1590
MslI	CAYNNNNRTG	1 cut(s)	1409
Msp20I	TGGCCA	1 cut(s)	96
MspA1I	CMGCKG	5 cut(s)	21, 220, 567, 830, 897
MspI	CCGG	6 cut(s)	15, 62, 75, 129, 280, 638
MspR9I	CCNGG	5 cut(s)	63, 280, 638, 1049, 1452
MvaI	CCWGG	2 cut(s)	1049, 1452
NciI	CCSGG	3 cut(s)	63, 280, 638
NdeI	CATATG	1 cut(s)	1288
NdeII	GATC	5 cut(s)	480, 655, 694, 721, 1549
NlaIII	CATG	6 cut(s)	118, 575, 589, 953, 1165, 1408
NlaIV	GGNNCC	5 cut(s)	9, 10, 284, 554, 601
NmeAIII	GCCGAG	1 cut(s)	274
NmuCI	GTSAC	5 cut(s)	82, 136, 287, 1240, 1399
NotI	GCGGCCGC	1 cut(s)	52
NspI	RCATGY	2 cut(s)	575, 1165
PaeI	GCATGC	1 cut(s)	575
PceI	AGGCCT	2 cut(s)	1008, 1338
PfeI	GAWTC	2 cut(s)	805, 953
PflMI	CCANNNNNTGG	2 cut(s)	900, 1080
PkrI	GCNGC	9 cut(s)	20, 23, 53, 56, 219, 315, 432, 450, 1630
PleI	GAGTC	1 cut(s)	410
PpsI	GAGTC	1 cut(s)	410
PsiI	TTATAA	1 cut(s)	1500
Psp124BI	GAGCTC	1 cut(s)	270
Psp1406I	AACGTT	1 cut(s)	1150
Psp6I	CCWGG	2 cut(s)	1047, 1450
PspFI	CCCAGC	2 cut(s)	4, 826
PspGI	CCWGG	2 cut(s)	1047, 1450
PspN4I	GGNNCC	5 cut(s)	9, 10, 284, 554, 601
PspOMI	GGGCCC	1 cut(s)	8
PspPI	GGNCC	4 cut(s)	8, 9, 305, 600
PstNI	CAGNNNCTG	1 cut(s)	757
PvuII	CAGCTG	3 cut(s)	220, 830, 897
RsaI	GTAC	1 cut(s)	1572
RsaNI	GTAC	1 cut(s)	1571
RseI	CAYNNNNRTG	1 cut(s)	1409
SacI	GAGCTC	1 cut(s)	270
SaqAI	TTAA	2 cut(s)	968, 1590
SatI	GCNGC	9 cut(s)	19, 22, 52, 55, 218, 314, 431, 449, 1629
Sau3AI	GATC	5 cut(s)	480, 655, 694, 721, 1549
Sau96I	GGNCC	4 cut(s)	8, 9, 305, 600
SchI	GAGTC	1 cut(s)	410
ScrFI	CCNGG	5 cut(s)	63, 280, 638, 1049, 1452
SduI	GDGCHC	5 cut(s)	12, 177, 270, 414, 557
SexAI	ACCWGGT	1 cut(s)	1047
SfaNI	GCATC	3 cut(s)	354, 670, 1548
SinI	GGWCC	1 cut(s)	600
SmiMI	CAYNNNNRTG	1 cut(s)	1409
SmlI	CTYRAG	2 cut(s)	106, 1268
SmoI	CTYRAG	2 cut(s)	106, 1268
SpeI	ACTAGT	2 cut(s)	1279, 1420
SphI	GCATGC	1 cut(s)	575
Sse9I	AATT	4 cut(s)	625, 908, 996, 1359
SseBI	AGGCCT	2 cut(s)	1008, 1338
SsiI	CCGC	6 cut(s)	21, 51, 55, 195, 303, 567
SspMI	CTAG	5 cut(s)	1280, 1325, 1346, 1352, 1421
SstI	GAGCTC	1 cut(s)	270
StuI	AGGCCT	2 cut(s)	1008, 1338
StyD4I	CCNGG	5 cut(s)	61, 278, 636, 1047, 1450
StyI	CCWWGG	1 cut(s)	1339
TaaI	ACNGT	9 cut(s)	172, 256, 293, 478, 1098, 1198, 1234, 1246, 1496
TaiI	ACGT	1 cut(s)	1153
TaqI	TCGA	3 cut(s)	177, 414, 874
TasI	AATT	4 cut(s)	625, 908, 996, 1359
TauI	GCSGC	3 cut(s)	24, 54, 57
TfiI	GAWTC	2 cut(s)	805, 953
Tru1I	TTAA	2 cut(s)	968, 1590
Tru9I	TTAA	2 cut(s)	968, 1590
TscAI	CASTG	6 cut(s)	51, 298, 483, 1101, 1237, 1404
TseFI	GTSAC	5 cut(s)	82, 136, 287, 1240, 1399
TseI	GCWGC	6 cut(s)	18, 217, 313, 430, 448, 1628
Tsp45I	GTSAC	5 cut(s)	82, 136, 287, 1240, 1399
TspDTI	ATGAA	6 cut(s)	131, 619, 966, 1294, 1447, 1548
TspGWI	ACGGA	1 cut(s)	592
TspRI	CASTG	6 cut(s)	51, 298, 483, 1101, 1237, 1404
Van91I	CCANNNNNTGG	2 cut(s)	900, 1080
VpaK11BI	GGWCC	1 cut(s)	600
XceI	RCATGY	2 cut(s)	575, 1165
XspI	CTAG	5 cut(s)	1280, 1325, 1346, 1352, 1421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.