Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0012241

Physical Location & Seq

Genomic Coordinates Reverse (-)

46627862 .. 46632587

Gene Structure 4726 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0292700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGCGGTAGTACCTCTCTTCGTCACGGCAACGAAGCTCGCCGGATTATTGGCCACCCTCACCGTCGCTGCCAATGTCTTCTCTTTCTCACGCTACCGGAAGAAGAATCTCCGGCCGTTCCGCTCCCCGATCGACGAGTCCTCCGACCCTCTCGCCGACTTCAATCTCAACGAAGGGGAAGATGGGTTCTTCTTTGGGTTGGCGACGGCTCCAGCACACGTTGAAGATGGGCTAAATGATGCTTGGCTTCAGTTTGCGCAAGAAAATCCTTGTGACAAATCAGAGTCTCAAGGTGATCGGCAGACAGCTGATGCTATAATGGGTTCCGCCACTGGCGATGGTGGGTCTCAGTCAGCTCCCCCATCGGGAATTTCTAAGAAAAAGAAGCCTCCTAAGATAGCTATGGAAGCCATGATTAGAGGGTATGCAAAGTATATTAAAGGGGACACAGGAAAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAACCTGTCCCAAATGAAGAATGCCATCATAATGTAGCTGCATGGCACAATGTTGAGCACCCAGAGGAGAGGATAAAGTTCTGGTCCGATCCTGATACAGAGCTAAAACTGGCTAAAGATACTGGCATCAGTGTCTTTCGAATGGGAATAGATTGGTCACGAGTCATGCCAGAGGAGCCGCTCAATGGGCTTACAAAAACTGTTAACTATGCTGCATTGGAGCGATACAAGTGGATCATCGGCAGGGTTCGCTCATACGGAATGAAGGTGATGTTGACCCTCTTCCATCACTCATTGCCACCATGGGCTGGGGAGTATGGAGGGTGGAAAGTGGAAAAGACAGTTGATTATTTCTTGGATTTCACAAGGCTTGTTGTTGACTGTGTATCAGATATGATAGACTATTGGGTACCATTCAATGAGCCTCATGTCTTCTGTATGCTTACCTATTGTGCGGGTGCATGGCCTGGTGGCCATCCTGACATGCTGGAGGTTGCGACTTCTGCTCTACCAACTGGTGTTTTCAAACAGGCCATGCATTGGATGGCCATTGCACACTTAAAGGCCTATGACTATATCCACGAAAAAAGTACCTCATCCAAGCCATTAGTTGGAGTGGCACACCATGTCTCATTCATGCGGCCATATGGTCTCTTTGATGTTCCTGCTGTTACACTGGCCAACTCCATGACTGTCTTCCCATATGTGGATAGTATTTCTGACAAGCTGGATTTTATTGGCATAAACTACTATGGACAGGAAGTGGTGTGTGGTGCTGGACTGAAGCTAGTAGAGACTGACGAATATAGTGAATCCGGACGTGGGATATACCCAGATGGCTTGTACCGCATGCTGCTTCAGTTCAATGACAGATATAAACATCTAAATGTACCCTTCATAATTACTGAAAATGGGGTATCTGATGAGACAGATGTAATCCGTCGGCCTTACCTGCTAGAGCATTTGCTCGCTGTTCATGCAGCCAAGATCATGGGTGTCCGTGTGCTTGGTTACCTGTTTTGGACTATTTCTGATAACTGGGAGTGGGCAGATGGGTATGGTCCCAAGTTTGGACTGGTAGCAGTTGATCGGGCCAAAGATCTTGCCCGGGTTCCACGTCCTTCATACCATCTATTTACTAAGGTGGTGACAACAGGTAAAATTACACGTTATGACCGGGCGCGTGCATGGCACCAACTCCAAATAGCTGCTAGAGAAAAGAAAATGCGATCCTTTTATCGGGCTGTTAATAAAGATGGTTTGATGTATGCAGGAGGCCTTGATGAACCTATACAGAGACCCTATGTTGAAAGAGATTGGCGATTCGGACACTATGAGATGGAAGGTCTTCAGGACCCCATTTGTCGCTTATGGAGATTCATGACCCGACCTGCCACCCTAAAATTTAGGAAAAGGAAACCCCAGATGGATGAAGAGGATGAAGCTCTATTGGCTCTCCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

648

Amino Acids

73.68

Weight (kDa)

6.23

Isoelectric Point (pI)

36.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	186 - 378	5.7e-29	Glycosyl hydrolase family 1
Glyco_hydro_1	PF00232	399 - 546	2.8e-20	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012241)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25620 AT3G25620
fragaria_vesca	FvH4_4g28360 FvH4_4g28360
malus_domestica	MD13G1049400.v1.1 MD16G1050400.v1.1
prunus_persica	Prupe.1G302500_v2.0.a1
pyrus_communis	pycom13g04360 pycom16g04430
rosa_chinensis	RchiOBHm_Chr4g0436231
rosa_laevigata	RLG00000006527
rosa_multiflora	Rmu_sc0007205.1_g000016
rosa_roxburghii	Rroxscaffold_5G00377420
rosa_rugosa	Rorug04G0292700
rosa_samantha	Rh4AG346900 Rh4BG355900 Rh4CG370500 Rh4DG349600
rosa_wichuraiana	Rw4G030320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	258
Acc36I	ACCTGC	2 cut(s)	1443, 1882
Acc65I	GGTACC	1 cut(s)	892
AccB1I	GGYRCC	2 cut(s)	892, 1674
AccB7I	CCANNNNNTGG	3 cut(s)	791, 1023, 1094
AccBSI	CCGCTC	2 cut(s)	123, 664
AccII	CGCG	1 cut(s)	1666
AccIII	TCCGGA	1 cut(s)	1298
AciI	CCGC	7 cut(s)	5, 121, 327, 662, 938, 1123, 1330
AclWI	GGATC	3 cut(s)	566, 725, 1707
AcoI	YGGCCR	6 cut(s)	51, 113, 955, 1029, 1124, 1161
AcsI	RAATTY	2 cut(s)	369, 1886
AcuI	CTGAAG	4 cut(s)	233, 1286, 1325, 1817
AfaI	GTAC	5 cut(s)	12, 894, 1075, 1328, 1374
AfiI	CCNNNNNNNGG	9 cut(s)	365, 668, 791, 1023, 1094, 1189, 1305, 1553, 1722
AflIII	ACRYGT	2 cut(s)	217, 1649
AgsI	TTSAA	6 cut(s)	163, 224, 901, 1009, 1348, 1793
AjiI	CACGTC	2 cut(s)	1304, 1601
AjnI	CCWGG	1 cut(s)	949
AloI	GAACNNNNNNTCC	2 cut(s)	170, 202
Alw21I	GWGCWC	1 cut(s)	543
Alw26I	GTCTC	7 cut(s)	291, 351, 1117, 1139, 1271, 1403, 1774
AlwI	GGATC	3 cut(s)	566, 725, 1707
Ama87I	CYCGRG	1 cut(s)	1590
Aor13HI	TCCGGA	1 cut(s)	1298
ApeKI	GCWGC	6 cut(s)	68, 521, 695, 1336, 1463, 1691
ApoI	RAATTY	2 cut(s)	369, 1886
Asp700I	GAANNNNTTC	1 cut(s)	1830
Asp718I	GGTACC	1 cut(s)	892
AspLEI	GCGC	2 cut(s)	259, 1666
AspS9I	GGNCC	4 cut(s)	567, 1544, 1575, 1837
AsuC2I	CCSGG	3 cut(s)	1591, 1592, 1661
AsuHPI	GGTGA	4 cut(s)	52, 305, 763, 1642
AsuII	TTCGAA	1 cut(s)	622
AvaI	CYCGRG	1 cut(s)	1590
AvaII	GGWCC	3 cut(s)	567, 1544, 1837
BalI	TGGCCA	4 cut(s)	53, 957, 1031, 1163
BanI	GGYRCC	2 cut(s)	892, 1674
BauI	CACGAG	1 cut(s)	642
BbsI	GAAGAC	4 cut(s)	70, 907, 1171, 1823
Bbv12I	GWGCWC	1 cut(s)	543
BbvI	GCAGC	6 cut(s)	55, 508, 682, 1323, 1475, 1678
BceAI	ACGGC	3 cut(s)	42, 100, 222
BciT130I	CCWGG	1 cut(s)	951
BcnI	CCSGG	3 cut(s)	1591, 1592, 1661
BcoDI	GTCTC	7 cut(s)	291, 351, 1117, 1139, 1271, 1403, 1774
BfaI	CTAG	3 cut(s)	1271, 1439, 1695
BfuAI	ACCTGC	2 cut(s)	1443, 1882
BglII	AGATCT	1 cut(s)	1582
BisI	GCNGC	8 cut(s)	69, 522, 662, 696, 1124, 1337, 1464, 1692
BlsI	GCNGC	8 cut(s)	70, 523, 663, 697, 1125, 1338, 1465, 1693
Bme1390I	CCNGG	4 cut(s)	951, 1591, 1592, 1661
Bme18I	GGWCC	3 cut(s)	567, 1544, 1837
BmeT110I	CYCGRG	1 cut(s)	1590
BmgBI	CACGTC	2 cut(s)	1304, 1601
BmgT120I	GGNCC	4 cut(s)	567, 1544, 1575, 1837
BmiI	GGNNCC	8 cut(s)	210, 325, 660, 894, 1546, 1596, 1676, 1839
BmrFI	CCNGG	4 cut(s)	951, 1591, 1592, 1661
BmrI	ACTGGG	1 cut(s)	1531
BmsI	GCATC	3 cut(s)	229, 301, 618
BmuI	ACTGGG	1 cut(s)	1531
BpiI	GAAGAC	4 cut(s)	70, 907, 1171, 1823
BpmI	CTGGAG	3 cut(s)	195, 992, 1925
Bpu14I	TTCGAA	1 cut(s)	622
BpuEI	CTTGAG	1 cut(s)	273
BpuMI	CCSGG	3 cut(s)	1591, 1592, 1661
BsaI	GGTCTC	3 cut(s)	351, 1139, 1774
BsaJI	CCNNGG	2 cut(s)	785, 1590
BsaWI	WCCGGW	2 cut(s)	96, 1298
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	9 cut(s)	365, 668, 791, 1023, 1094, 1189, 1305, 1553, 1722
Bse1I	ACTGG	8 cut(s)	337, 597, 610, 1003, 1164, 1526, 1563, 1942
Bse3DI	GCAATG	2 cut(s)	776, 1032
BseAI	TCCGGA	1 cut(s)	1298
BseBI	CCWGG	1 cut(s)	951
BseDI	CCNNGG	2 cut(s)	785, 1590
BseGI	GGATG	5 cut(s)	958, 1032, 1079, 1918, 1927
BseLI	CCNNNNNNNGG	9 cut(s)	365, 668, 791, 1023, 1094, 1189, 1305, 1553, 1722
BseMI	GCAATG	2 cut(s)	776, 1032
BseMII	CTCAG	1 cut(s)	362
BseNI	ACTGG	8 cut(s)	337, 597, 610, 1003, 1164, 1526, 1563, 1942
BseRI	GAGGAG	2 cut(s)	563, 671
BseX3I	CGGCCG	1 cut(s)	113
BseXI	GCAGC	6 cut(s)	55, 508, 682, 1323, 1475, 1678
BseYI	CCCAGC	1 cut(s)	791
Bsh1236I	CGCG	1 cut(s)	1666
Bsh1285I	CGRYCG	2 cut(s)	116, 132
BshNI	GGYRCC	2 cut(s)	892, 1674
BsiEI	CGRYCG	2 cut(s)	116, 132
BsiHKAI	GWGCWC	1 cut(s)	543
BsiHKCI	CYCGRG	1 cut(s)	1590
BsiSI	CCGG	6 cut(s)	42, 97, 112, 1299, 1591, 1660
BslFI	GGGAC	3 cut(s)	458, 476, 1530
BslI	CCNNNNNNNGG	9 cut(s)	365, 668, 791, 1023, 1094, 1189, 1305, 1553, 1722
BsmAI	GTCTC	7 cut(s)	291, 351, 1117, 1139, 1271, 1403, 1774
BsmFI	GGGAC	3 cut(s)	458, 476, 1530
BsmI	GAATGC	1 cut(s)	509
Bso31I	GGTCTC	3 cut(s)	351, 1139, 1774
BsoBI	CYCGRG	1 cut(s)	1590
Bsp119I	TTCGAA	1 cut(s)	622
Bsp1286I	GDGCHC	1 cut(s)	543
Bsp13I	TCCGGA	1 cut(s)	1298
Bsp143I	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
Bsp19I	CCATGG	1 cut(s)	785
BspACI	CCGC	7 cut(s)	5, 121, 327, 662, 938, 1123, 1330
BspCNI	CTCAG	1 cut(s)	361
BspEI	TCCGGA	1 cut(s)	1298
BspFNI	CGCG	1 cut(s)	1666
BspHI	TCATGA	1 cut(s)	1863
BspLI	GGNNCC	8 cut(s)	210, 325, 660, 894, 1546, 1596, 1676, 1839
BspMI	ACCTGC	2 cut(s)	1443, 1882
BspPI	GGATC	3 cut(s)	566, 725, 1707
BspT104I	TTCGAA	1 cut(s)	622
BspT107I	GGYRCC	2 cut(s)	892, 1674
BspTNI	GGTCTC	3 cut(s)	351, 1139, 1774
BsrBI	CCGCTC	2 cut(s)	123, 664
BsrDI	GCAATG	2 cut(s)	776, 1032
BsrI	ACTGG	8 cut(s)	337, 597, 610, 1003, 1164, 1526, 1563, 1942
BssECI	CCNNGG	2 cut(s)	785, 1590
BssMI	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
BssSI	CACGAG	1 cut(s)	642
BssT1I	CCWWGG	1 cut(s)	785
Bst2BI	CACGAG	1 cut(s)	642
Bst2UI	CCWGG	1 cut(s)	951
Bst4CI	ACNGT	5 cut(s)	64, 685, 826, 866, 1177
Bst6I	CTCTTC	3 cut(s)	23, 770, 1911
BstBI	TTCGAA	1 cut(s)	622
BstC8I	GCNNGC	4 cut(s)	39, 1334, 1452, 1668
BstDEI	CTNAG	4 cut(s)	348, 375, 393, 1623
BstDSI	CCRYGG	1 cut(s)	785
BstEII	GGTNACC	1 cut(s)	1493
BstF5I	GGATG	5 cut(s)	958, 1032, 1079, 1918, 1927
BstFNI	CGCG	1 cut(s)	1666
BstHHI	GCGC	2 cut(s)	259, 1666
BstKTI	GATC	8 cut(s)	132, 298, 574, 720, 1473, 1573, 1585, 1715
BstMAI	GTCTC	7 cut(s)	291, 351, 1117, 1139, 1271, 1403, 1774
BstMBI	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
BstMCI	CGRYCG	2 cut(s)	116, 132
BstNI	CCWGG	1 cut(s)	951
BstNSI	RCATGY	2 cut(s)	970, 1336
BstPI	GGTNACC	1 cut(s)	1493
BstSCI	CCNGG	4 cut(s)	949, 1589, 1590, 1659
BstUI	CGCG	1 cut(s)	1666
BstV1I	GCAGC	6 cut(s)	55, 508, 682, 1323, 1475, 1678
BstV2I	GAAGAC	4 cut(s)	70, 907, 1171, 1823
BstX2I	RGATCY	1 cut(s)	1582
BstXI	CCANNNNNNTGG	1 cut(s)	1474
BstYI	RGATCY	1 cut(s)	1582
BstZI	CGGCCG	1 cut(s)	113
BtgI	CCRYGG	1 cut(s)	785
BtgZI	GCGATG	1 cut(s)	351
BtrI	CACGTC	2 cut(s)	1304, 1601
BtsCI	GGATG	5 cut(s)	958, 1032, 1079, 1918, 1927
BtsIMutI	CAGTG	3 cut(s)	330, 619, 1157
BveI	ACCTGC	2 cut(s)	1443, 1882
Cac8I	GCNNGC	4 cut(s)	39, 1334, 1452, 1668
CciI	TCATGA	1 cut(s)	1863
CfoI	GCGC	2 cut(s)	259, 1666
Cfr13I	GGNCC	4 cut(s)	567, 1544, 1575, 1837
Cfr9I	CCCGGG	1 cut(s)	1590
Csp6I	GTAC	5 cut(s)	11, 893, 1074, 1327, 1373
CviQI	GTAC	5 cut(s)	11, 893, 1074, 1327, 1373
DdeI	CTNAG	4 cut(s)	348, 375, 393, 1623
DpnI	GATC	8 cut(s)	131, 297, 573, 719, 1472, 1572, 1584, 1714
DpnII	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
EaeI	YGGCCR	6 cut(s)	51, 113, 955, 1029, 1124, 1161
EagI	CGGCCG	1 cut(s)	113
Eam1104I	CTCTTC	3 cut(s)	23, 770, 1911
EarI	CTCTTC	3 cut(s)	23, 770, 1911
EciI	GGCGGA	1 cut(s)	316
EclXI	CGGCCG	1 cut(s)	113
Eco130I	CCWWGG	1 cut(s)	785
Eco147I	AGGCCT	2 cut(s)	1049, 1761
Eco31I	GGTCTC	3 cut(s)	351, 1139, 1774
Eco47I	GGWCC	3 cut(s)	567, 1544, 1837
Eco52I	CGGCCG	1 cut(s)	113
Eco57I	CTGAAG	4 cut(s)	233, 1286, 1325, 1817
Eco88I	CYCGRG	1 cut(s)	1590
Eco91I	GGTNACC	1 cut(s)	1493
EcoO109I	RGGNCCY	1 cut(s)	1837
EcoO65I	GGTNACC	1 cut(s)	1493
EcoRII	CCWGG	1 cut(s)	949
EcoT14I	CCWWGG	1 cut(s)	785
EcoT22I	ATGCAT	1 cut(s)	1023
ErhI	CCWWGG	1 cut(s)	785
FaqI	GGGAC	3 cut(s)	458, 476, 1530
FauI	CCCGC	1 cut(s)	931
FauNDI	CATATG	2 cut(s)	1129, 1186
Fnu4HI	GCNGC	8 cut(s)	69, 522, 662, 696, 1124, 1337, 1464, 1692
FokI	GGATG	5 cut(s)	945, 1039, 1066, 1925, 1934
Fsp4HI	GCNGC	8 cut(s)	69, 522, 662, 696, 1124, 1337, 1464, 1692
FspBI	CTAG	3 cut(s)	1271, 1439, 1695
FspI	TGCGCA	1 cut(s)	258
GlaI	GCGC	2 cut(s)	258, 1665
GluI	GCNGC	8 cut(s)	69, 522, 662, 696, 1124, 1337, 1464, 1692
GsaI	CCCAGC	1 cut(s)	795
GsuI	CTGGAG	3 cut(s)	195, 992, 1925
HapII	CCGG	6 cut(s)	42, 97, 112, 1299, 1591, 1660
HhaI	GCGC	2 cut(s)	259, 1666
Hin6I	GCGC	2 cut(s)	257, 1664
HinP1I	GCGC	2 cut(s)	257, 1664
HincII	GTYRAC	3 cut(s)	688, 759, 862
HindII	GTYRAC	3 cut(s)	688, 759, 862
HinfI	GANTC	7 cut(s)	106, 137, 284, 645, 1295, 1806, 1860
HpaI	GTTAAC	1 cut(s)	688
HpaII	CCGG	6 cut(s)	42, 97, 112, 1299, 1591, 1660
HphI	GGTGA	4 cut(s)	52, 305, 763, 1642
Hpy166II	GTNNAC	3 cut(s)	688, 759, 862
Hpy188I	TCNGA	8 cut(s)	145, 283, 571, 874, 1204, 1405, 1516, 1811
Hpy188III	TCNNGA	7 cut(s)	366, 575, 642, 962, 1299, 1835, 1864
Hpy8I	GTNNAC	3 cut(s)	688, 759, 862
Hpy99I	CGWCG	4 cut(s)	68, 137, 208, 1428
HpyAV	CCTTC	5 cut(s)	167, 742, 1387, 1614, 1820
HpyCH4III	ACNGT	5 cut(s)	64, 685, 826, 866, 1177
HpyCH4IV	ACGT	4 cut(s)	219, 1303, 1600, 1651
HpyCH4V	TGCA	9 cut(s)	428, 524, 698, 944, 1021, 1037, 1463, 1670, 1754
HpyF3I	CTNAG	4 cut(s)	348, 375, 393, 1623
HpySE526I	ACGT	4 cut(s)	219, 1303, 1600, 1651
HspAI	GCGC	2 cut(s)	257, 1664
Kpn2I	TCCGGA	1 cut(s)	1298
KpnI	GGTACC	1 cut(s)	896
KspAI	GTTAAC	1 cut(s)	688
Kzo9I	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
LmnI	GCTCC	5 cut(s)	128, 214, 361, 658, 703
Lsp1109I	GCAGC	6 cut(s)	55, 508, 682, 1323, 1475, 1678
LweI	GCATC	3 cut(s)	229, 301, 618
MaeI	CTAG	3 cut(s)	1271, 1439, 1695
MaeII	ACGT	4 cut(s)	219, 1303, 1600, 1651
MaeIII	GTNAC	6 cut(s)	22, 272, 639, 1153, 1493, 1630
MalI	GATC	8 cut(s)	131, 297, 573, 719, 1472, 1572, 1584, 1714
MbiI	CCGCTC	2 cut(s)	123, 664
MboI	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
MflI	RGATCY	1 cut(s)	1582
MhlI	GDGCHC	1 cut(s)	543
MlsI	TGGCCA	4 cut(s)	53, 957, 1031, 1163
MluCI	AATT	4 cut(s)	369, 1383, 1644, 1886
MluNI	TGGCCA	4 cut(s)	53, 957, 1031, 1163
MlyI	GAGTC	3 cut(s)	146, 293, 654
MmeI	TCCRAC	2 cut(s)	168, 1075
Mox20I	TGGCCA	4 cut(s)	53, 957, 1031, 1163
Mph1103I	ATGCAT	1 cut(s)	1023
MroI	TCCGGA	1 cut(s)	1298
MroXI	GAANNNNTTC	1 cut(s)	1830
MscI	TGGCCA	4 cut(s)	53, 957, 1031, 1163
MseI	TTAA	4 cut(s)	438, 687, 1043, 1731
MslI	CAYNNNNRTG	2 cut(s)	513, 1368
Msp20I	TGGCCA	4 cut(s)	53, 957, 1031, 1163
MspA1I	CMGCKG	1 cut(s)	308
MspI	CCGG	6 cut(s)	42, 97, 112, 1299, 1591, 1660
MspR9I	CCNGG	4 cut(s)	951, 1591, 1592, 1661
Mva1269I	GAATGC	1 cut(s)	509
MvaI	CCWGG	1 cut(s)	951
MvnI	CGCG	1 cut(s)	1666
NciI	CCSGG	3 cut(s)	1591, 1592, 1661
NcoI	CCATGG	1 cut(s)	785
NdeI	CATATG	2 cut(s)	1129, 1186
NdeII	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
NlaIV	GGNNCC	8 cut(s)	210, 325, 660, 894, 1546, 1596, 1676, 1839
NmuCI	GTSAC	4 cut(s)	22, 272, 639, 1630
NsbI	TGCGCA	1 cut(s)	258
NsiI	ATGCAT	1 cut(s)	1023
NspI	RCATGY	2 cut(s)	970, 1336
NspV	TTCGAA	1 cut(s)	622
PaeI	GCATGC	1 cut(s)	1336
PagI	TCATGA	1 cut(s)	1863
PceI	AGGCCT	2 cut(s)	1049, 1761
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	1 cut(s)	509
PdmI	GAANNNNTTC	1 cut(s)	1830
PfeI	GAWTC	4 cut(s)	106, 1295, 1806, 1860
PflMI	CCANNNNNTGG	3 cut(s)	791, 1023, 1094
PkrI	GCNGC	8 cut(s)	70, 523, 663, 697, 1125, 1338, 1465, 1693
Ple19I	CGATCG	1 cut(s)	132
PleI	GAGTC	3 cut(s)	145, 292, 653
PpsI	GAGTC	3 cut(s)	145, 292, 653
PpuMI	RGGWCCY	1 cut(s)	1837
Psp5II	RGGWCCY	1 cut(s)	1837
Psp6I	CCWGG	1 cut(s)	949
PspEI	GGTNACC	1 cut(s)	1493
PspFI	CCCAGC	1 cut(s)	791
PspGI	CCWGG	1 cut(s)	949
PspN4I	GGNNCC	8 cut(s)	210, 325, 660, 894, 1546, 1596, 1676, 1839
PspPI	GGNCC	4 cut(s)	567, 1544, 1575, 1837
PspPPI	RGGWCCY	1 cut(s)	1837
PsuI	RGATCY	1 cut(s)	1582
PvuI	CGATCG	1 cut(s)	132
PvuII	CAGCTG	1 cut(s)	308
RsaI	GTAC	5 cut(s)	12, 894, 1075, 1328, 1374
RsaNI	GTAC	5 cut(s)	11, 893, 1074, 1327, 1373
RseI	CAYNNNNRTG	2 cut(s)	513, 1368
SaqAI	TTAA	4 cut(s)	438, 687, 1043, 1731
SatI	GCNGC	8 cut(s)	69, 522, 662, 696, 1124, 1337, 1464, 1692
Sau3AI	GATC	8 cut(s)	129, 295, 571, 717, 1470, 1570, 1582, 1712
Sau96I	GGNCC	4 cut(s)	567, 1544, 1575, 1837
SchI	GAGTC	3 cut(s)	146, 293, 654
ScrFI	CCNGG	4 cut(s)	951, 1591, 1592, 1661
SduI	GDGCHC	1 cut(s)	543
SfaNI	GCATC	3 cut(s)	229, 301, 618
SfuI	TTCGAA	1 cut(s)	622
SinI	GGWCC	3 cut(s)	567, 1544, 1837
SmaI	CCCGGG	1 cut(s)	1592
SmiMI	CAYNNNNRTG	2 cut(s)	513, 1368
SmlI	CTYRAG	1 cut(s)	288
SmoI	CTYRAG	1 cut(s)	288
SphI	GCATGC	1 cut(s)	1336
Sse9I	AATT	4 cut(s)	369, 1383, 1644, 1886
SseBI	AGGCCT	2 cut(s)	1049, 1761
SsiI	CCGC	7 cut(s)	5, 121, 327, 662, 938, 1123, 1330
SspMI	CTAG	3 cut(s)	1271, 1439, 1695
StuI	AGGCCT	2 cut(s)	1049, 1761
StyD4I	CCNGG	4 cut(s)	949, 1589, 1590, 1659
StyI	CCWWGG	1 cut(s)	785
TaaI	ACNGT	5 cut(s)	64, 685, 826, 866, 1177
TaiI	ACGT	4 cut(s)	222, 1306, 1603, 1654
TaqI	TCGA	2 cut(s)	132, 622
TasI	AATT	4 cut(s)	369, 1383, 1644, 1886
TauI	GCSGC	2 cut(s)	664, 1126
TfiI	GAWTC	4 cut(s)	106, 1295, 1806, 1860
Tru1I	TTAA	4 cut(s)	438, 687, 1043, 1731
Tru9I	TTAA	4 cut(s)	438, 687, 1043, 1731
TscAI	CASTG	3 cut(s)	337, 619, 1164
TseFI	GTSAC	4 cut(s)	22, 272, 639, 1630
TseI	GCWGC	6 cut(s)	68, 521, 695, 1336, 1463, 1691
Tsp45I	GTSAC	4 cut(s)	22, 272, 639, 1630
TspGWI	ACGGA	3 cut(s)	756, 1412, 1472
TspMI	CCCGGG	1 cut(s)	1590
TspRI	CASTG	3 cut(s)	337, 619, 1164
Van91I	CCANNNNNTGG	3 cut(s)	791, 1023, 1094
VpaK11BI	GGWCC	3 cut(s)	567, 1544, 1837
XapI	RAATTY	2 cut(s)	369, 1886
XceI	RCATGY	2 cut(s)	970, 1336
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1024, 1555
XmaI	CCCGGG	1 cut(s)	1590
XmnI	GAANNNNTTC	1 cut(s)	1830
XspI	CTAG	3 cut(s)	1271, 1439, 1695
Zsp2I	ATGCAT	1 cut(s)	1023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.