Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015398

Physical Location & Seq

Genomic Coordinates Reverse (-)

64218213 .. 64223108

Gene Structure 4896 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41052

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGCGGCGTTGCAGAGCGTGGTGCAGTCGTGCTTGAGCACCACCACCGCGAGTAGCTTCGGCTCGTGTAAAGGTGGTGGCGGGGCTTCGTCTGCTTCTGCTAATGTAATGGCGGTTCACGATCAGTTTCCGGCGGGGTTGAGGGTTCTGGTGGTCGACGACGACACGACGTGCCTGGCGATTCTGGAGCAGATGCTTCGCCGGTGTCTCTACCAGGTAACACTTTGCTCCCAGGCTACTGATGCTTTGAATCATCTACGGGAGAAAAAAGGCTATTTTGATGTGGTATTGAGTGATGTTCATATGCCTGATATGGATGGATTTAAACTCCTGGAATGTATAGGGCTGGAAATGGATCTTCCTGTCATCATGATGTCTGCTGATGGGAGAACAAGTGCTGTTATGAAAGGAATCAGACATGGTGCTTGCGATTATTTAATTAAGCCTGTACGTGAGGAAGAGCTCAAGAATATCTGGCAGCATGTTGCTAGGAAAAAATTAAACGAAAATAAAGAAATTGAACATTCAGGGAGCTTGGAAGATAATGATAGGCATAAACGGGGAATTAATGATGTTGAATATACTTCTTCTGTTATTGAAGGAACAGAAGGAACAGCGAGAACGAGAAGTCAGAAGAAAAGGAGCAGTGGTAAAGAAGATGAAGATGGTGATATGGAAAATGATGATATGTCTACATCAAAGAAACCCCGTGTAGTGTGGTCAGTTGAACTCCATCAGCAATTTGTCAGTGCTGTTAACCAACTTGGGCTTGATAAGGCCGTACCAAAGAGAATCCTTGAATTGATGAATGTACCTGGTTTAAGTAGAGAAAATGTTGCAAGCCATCTGCAGAAATTCAGGTTATATTTGAAGAGATTAAGCGTAGAGCAACAACAAAGTGCAAATGCTTTCTGTGGGCCTGTAGAATCAAATGTGAAATTGGTTTCGCATGGGAATAGATTTGACATCCAAGCTTTGGCTGCCGCTGGACAAATTCCTCCACAAACACTTGCAGCCCTGCAAGCTGAGCTTCTAGGTCAACCTGTAGGAAACCCTGGGTCAACAATAGATCAACCTGCTATTTTACATGCATCCTTGCAGAGACCAAAGCGTGCCCCTGTAGATCATGGTGTGGCATTTGGGCAGCCTTTGATAAAACGCCAATCTAACGTTTCTGTACACTTTCCACAATGTATCATATCTGCTGAGGATGCATCTGCAGGTGGACCATGGCGGTCTAATAGTCTTGGTACCGTGGCACCAAACAGCAATCTTGGAGGGTTTAGCACTCAGAATAGCAACGTGTTCATGGATACATTGCAGCAGGAGCAAAGACCACAGCCAAAAAGACATCAGCAGTCTTTGCTAACTGAACCTGTTCGTACTATTAATGTACAGCCATCTTGCCTTGTGGTTCCCTCGCAGTCATCAGCTAGTTTCCAGGCTGGAAATAGTCCTGCTTCTGTCAATCAGAGTTGTAGCTTTAACAGGTCCACTGCTATTGATTACAGTCTCCTTTCAGCTCAATCTAATAATAATTCCTCATTGAATATCGGACGGATATCAAATGGACATCATAAAACTCCTGGCATTCTTAGTGGGTACTCAGCCACTGGTTCCTTATCTACTCCATCTTCTTCTGTAATTGCTGAAAGTAGCATCAGTCCCCAAAACTCAGCTGTGACATATAGTGATGCTCGACAATTGACTGGGCGGTTGCATAATATGTCAAACATCCAGGATTTATATGTTCCTAAATCAGGGGAAATGCTTGATCAGGGCGCTTATAGGAATCTCGGATTTGTTGGTAAAGAGACTCGGATTCCAAGTCGATTTGATGAGTTTGAATCGCAAAGCAACTTGAACCATGGAAACATCCATGCCGAGAACATTGGTAATCCAGTCAAGCAGGAGCCAAATATGGGTTTTGTGGATAATGCAAAAGGCTCCCCAATTTTTCAACAGTTCTCTTCAAGTGATCTCATGAGTGTTTTCAATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

667

Amino Acids

72.43

Weight (kDa)

6.45

Isoelectric Point (pI)

60.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	49 - 157	1.1e-23	Response regulator receiver domain
Myb_DNA-binding	PF00249	237 - 286	2.5e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015398)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01760 AT2G01760 AT2G01760
fragaria_vesca	FvH4_4g33470
malus_domestica	MD13G1019800.v1.1 MD16G1017900.v1.1
prunus_persica	Prupe.1G334200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0442781
rosa_multiflora	Rmu_ssc0000204.1_g000021
rosa_roxburghii	Rroxscaffold_5G00383560
rosa_rugosa	Rorug04G0343000
rosa_samantha	Rh4AG395600 Rh4BG408300 Rh4CG424100 Rh4DG402500
rosa_wichuraiana	Rw4G034190

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1211
Acc36I	ACCTGC	2 cut(s)	1084, 1211
Acc65I	GGTACC	1 cut(s)	1250
AccB1I	GGYRCC	2 cut(s)	1250, 1258
AccB7I	CCANNNNNTGG	1 cut(s)	976
AccI	GTMKAC	2 cut(s)	156, 692
AccII	CGCG	1 cut(s)	50
AciI	CCGC	8 cut(s)	5, 48, 81, 113, 134, 984, 1234, 1714
AclI	AACGTT	1 cut(s)	1170
AclWI	GGATC	1 cut(s)	363
AcsI	RAATTY	2 cut(s)	854, 993
AdeI	CACNNNGTG	1 cut(s)	171
AfaI	GTAC	8 cut(s)	450, 783, 813, 1179, 1252, 1384, 1395, 1604
AfiI	CCNNNNNNNGG	3 cut(s)	976, 1760, 1922
AflIII	ACRYGT	1 cut(s)	1302
AjiI	CACGTC	1 cut(s)	171
AjnI	CCWGG	9 cut(s)	174, 213, 231, 330, 814, 1054, 1440, 1585, 1737
Alw21I	GWGCWC	2 cut(s)	41, 465
Alw26I	GTCTC	4 cut(s)	212, 1096, 1517, 1808
AlwI	GGATC	1 cut(s)	363
AlwNI	CAGNNNCTG	1 cut(s)	1613
AoxI	GGCC	2 cut(s)	777, 917
ApeKI	GCWGC	5 cut(s)	478, 980, 1013, 1144, 1321
ApoI	RAATTY	2 cut(s)	854, 993
AseI	ATTAAT	2 cut(s)	567, 1389
Asp700I	GAANNNNTTC	1 cut(s)	1377
Asp718I	GGTACC	1 cut(s)	1250
AspLEI	GCGC	1 cut(s)	1784
AspS9I	GGNCC	3 cut(s)	917, 1226, 1491
AsuHPI	GGTGA	1 cut(s)	680
AvaII	GGWCC	2 cut(s)	1226, 1491
BaeGI	GKGCMC	1 cut(s)	1117
BanI	GGYRCC	2 cut(s)	1250, 1258
BanII	GRGCYC	1 cut(s)	465
BauI	CACGAG	1 cut(s)	64
Bbv12I	GWGCWC	2 cut(s)	41, 465
BbvCI	CCTCAGC	1 cut(s)	1206
BbvI	GCAGC	5 cut(s)	490, 967, 1025, 1156, 1333
BccI	CCATC	7 cut(s)	311, 377, 659, 741, 852, 1408, 1639
BceAI	ACGGC	1 cut(s)	764
BcgI	CGANNNNNNTGC	2 cut(s)	179, 213
BciT130I	CCWGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
BciVI	GTATCC	1 cut(s)	1306
BclI	TGATCA	1 cut(s)	1774
BcoDI	GTCTC	4 cut(s)	212, 1096, 1517, 1808
BfaI	CTAG	3 cut(s)	489, 1034, 1434
BfmI	CTRYAG	5 cut(s)	848, 921, 1044, 1119, 1218
BfoI	RGCGCY	1 cut(s)	1785
BfuAI	ACCTGC	2 cut(s)	1084, 1211
BfuI	GTATCC	1 cut(s)	1306
BisI	GCNGC	7 cut(s)	6, 479, 981, 984, 1014, 1145, 1322
BlpI	GCTNAGC	1 cut(s)	1026
BlsI	GCNGC	7 cut(s)	7, 480, 982, 985, 1015, 1146, 1323
Bme1390I	CCNGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
Bme18I	GGWCC	2 cut(s)	1226, 1491
BmgBI	CACGTC	1 cut(s)	171
BmgT120I	GGNCC	3 cut(s)	917, 1226, 1491
BmiI	GGNNCC	6 cut(s)	1252, 1260, 1416, 1618, 1914, 1948
BmrFI	CCNGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
BmrI	ACTGGG	1 cut(s)	1719
BmsI	GCATC	7 cut(s)	183, 232, 1100, 1201, 1223, 1668, 1684
BmuI	ACTGGG	1 cut(s)	1719
BpmI	CTGGAG	1 cut(s)	206
Bpu10I	CCTNAGC	1 cut(s)	1206
Bpu1102I	GCTNAGC	1 cut(s)	1026
BpuEI	CTTGAG	2 cut(s)	55, 449
BsaAI	YACGTR	1 cut(s)	452
BsaI	GGTCTC	1 cut(s)	1096
BsaJI	CCNNGG	6 cut(s)	231, 1054, 1055, 1229, 1254, 1867
BsaXI	ACNNNNNCTCC	4 cut(s)	379, 409, 634, 664
Bsc4I	CCNNNNNNNGG	3 cut(s)	976, 1760, 1922
Bse118I	RCCGGY	1 cut(s)	201
Bse1I	ACTGG	3 cut(s)	1618, 1714, 1901
Bse3DI	GCAATG	1 cut(s)	1316
BseBI	CCWGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
BseDI	CCNNGG	6 cut(s)	231, 1054, 1055, 1229, 1254, 1867
BseGI	GGATG	6 cut(s)	322, 966, 1091, 1216, 1734, 1875
BseLI	CCNNNNNNNGG	3 cut(s)	976, 1760, 1922
BseMI	GCAATG	1 cut(s)	1316
BseMII	CTCAG	5 cut(s)	1017, 1197, 1304, 1620, 1689
BseNI	ACTGG	3 cut(s)	1618, 1714, 1901
BseSI	GKGCMC	1 cut(s)	1117
BseXI	GCAGC	5 cut(s)	490, 967, 1025, 1156, 1333
BsgI	GTGCAG	1 cut(s)	44
Bsh1236I	CGCG	1 cut(s)	50
BshFI	GGCC	2 cut(s)	779, 919
BshNI	GGYRCC	2 cut(s)	1250, 1258
BsiHKAI	GWGCWC	2 cut(s)	41, 465
BsiSI	CCGG	2 cut(s)	131, 202
BslFI	GGGAC	1 cut(s)	1650
BslI	CCNNNNNNNGG	3 cut(s)	976, 1760, 1922
BsmAI	GTCTC	4 cut(s)	212, 1096, 1517, 1808
BsmFI	GGGAC	1 cut(s)	1650
BsmI	GAATGC	1 cut(s)	1590
BsnI	GGCC	2 cut(s)	779, 919
Bso31I	GGTCTC	1 cut(s)	1096
Bsp1286I	GDGCHC	3 cut(s)	41, 465, 1117
Bsp1407I	TGTACA	2 cut(s)	1177, 1393
Bsp143I	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
Bsp1720I	GCTNAGC	1 cut(s)	1026
Bsp19I	CCATGG	2 cut(s)	1229, 1867
BspACI	CCGC	8 cut(s)	5, 48, 81, 113, 134, 984, 1234, 1714
BspANI	GGCC	2 cut(s)	779, 919
BspCNI	CTCAG	5 cut(s)	1018, 1198, 1303, 1619, 1688
BspFNI	CGCG	1 cut(s)	50
BspHI	TCATGA	2 cut(s)	369, 1983
BspLI	GGNNCC	6 cut(s)	1252, 1260, 1416, 1618, 1914, 1948
BspMAI	CTGCAG	2 cut(s)	852, 1222
BspMI	ACCTGC	2 cut(s)	1084, 1211
BspPI	GGATC	1 cut(s)	363
BspQI	GCTCTTC	1 cut(s)	453
BspT107I	GGYRCC	2 cut(s)	1250, 1258
BspTNI	GGTCTC	1 cut(s)	1096
BsrDI	GCAATG	1 cut(s)	1316
BsrFI	RCCGGY	1 cut(s)	201
BsrGI	TGTACA	2 cut(s)	1177, 1393
BsrI	ACTGG	3 cut(s)	1618, 1714, 1901
BssAI	RCCGGY	1 cut(s)	201
BssECI	CCNNGG	6 cut(s)	231, 1054, 1055, 1229, 1254, 1867
BssMI	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
BssSI	CACGAG	1 cut(s)	64
BssT1I	CCWWGG	2 cut(s)	1229, 1867
Bst2BI	CACGAG	1 cut(s)	64
Bst2UI	CCWGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
Bst4CI	ACNGT	3 cut(s)	1255, 1511, 1965
Bst6I	CTCTTC	3 cut(s)	453, 866, 1975
BstAPI	GCANNNNNTGC	1 cut(s)	1363
BstAUI	TGTACA	2 cut(s)	1177, 1393
BstBAI	YACGTR	1 cut(s)	452
BstC8I	GCNNGC	4 cut(s)	427, 841, 1023, 1113
BstDEI	CTNAG	6 cut(s)	1026, 1206, 1290, 1595, 1606, 1675
BstDSI	CCRYGG	3 cut(s)	1229, 1254, 1867
BstENI	CCTNNNNNAGG	1 cut(s)	1758
BstF5I	GGATG	6 cut(s)	322, 966, 1091, 1216, 1734, 1875
BstFNI	CGCG	1 cut(s)	50
BstH2I	RGCGCY	1 cut(s)	1785
BstHHI	GCGC	1 cut(s)	1784
BstKTI	GATC	6 cut(s)	124, 358, 1072, 1126, 1777, 1981
BstMAI	GTCTC	4 cut(s)	212, 1096, 1517, 1808
BstMBI	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 242, 980, 1022, 1027, 1211, 1327, 1363
BstNI	CCWGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
BstNSI	RCATGY	2 cut(s)	485, 1091
BstSCI	CCNGG	9 cut(s)	174, 213, 231, 330, 814, 1054, 1440, 1585, 1737
BstSFI	CTRYAG	5 cut(s)	848, 921, 1044, 1119, 1218
BstSLI	GKGCMC	1 cut(s)	1117
BstUI	CGCG	1 cut(s)	50
BstV1I	GCAGC	5 cut(s)	490, 967, 1025, 1156, 1333
BstX2I	RGATCY	1 cut(s)	355
BstYI	RGATCY	1 cut(s)	355
BsuI	GTATCC	1 cut(s)	1306
BsuRI	GGCC	2 cut(s)	779, 919
BtgI	CCRYGG	3 cut(s)	1229, 1254, 1867
BtrI	CACGTC	1 cut(s)	171
BtsCI	GGATG	6 cut(s)	322, 966, 1091, 1216, 1734, 1875
BtsI	GCAGTG	2 cut(s)	652, 1494
BtsIMutI	CAGTG	4 cut(s)	652, 754, 1494, 1611
BveI	ACCTGC	2 cut(s)	1084, 1211
Cac8I	GCNNGC	4 cut(s)	427, 841, 1023, 1113
CaiI	CAGNNNCTG	1 cut(s)	1613
CciI	TCATGA	2 cut(s)	369, 1983
CfoI	GCGC	1 cut(s)	1784
Cfr10I	RCCGGY	1 cut(s)	201
Cfr13I	GGNCC	3 cut(s)	917, 1226, 1491
CsiI	ACCWGGT	2 cut(s)	213, 814
Csp6I	GTAC	8 cut(s)	449, 782, 812, 1178, 1251, 1383, 1394, 1603
CspCI	CAANNNNNGTGG	2 cut(s)	1483, 1518
CviQI	GTAC	8 cut(s)	449, 782, 812, 1178, 1251, 1383, 1394, 1603
DdeI	CTNAG	6 cut(s)	1026, 1206, 1290, 1595, 1606, 1675
DpnI	GATC	6 cut(s)	123, 357, 1071, 1125, 1776, 1980
DpnII	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
DraI	TTTAAA	1 cut(s)	325
DraIII	CACNNNGTG	1 cut(s)	171
Eam1104I	CTCTTC	3 cut(s)	453, 866, 1975
EarI	CTCTTC	3 cut(s)	453, 866, 1975
Ecl136II	GAGCTC	1 cut(s)	463
Eco130I	CCWWGG	2 cut(s)	1229, 1867
Eco24I	GRGCYC	1 cut(s)	465
Eco31I	GGTCTC	1 cut(s)	1096
Eco32I	GATATC	1 cut(s)	1563
Eco47I	GGWCC	2 cut(s)	1226, 1491
Eco53kI	GAGCTC	1 cut(s)	463
EcoICRI	GAGCTC	1 cut(s)	463
EcoNI	CCTNNNNNAGG	1 cut(s)	1758
EcoRII	CCWGG	9 cut(s)	174, 213, 231, 330, 814, 1054, 1440, 1585, 1737
EcoRV	GATATC	1 cut(s)	1563
EcoT14I	CCWWGG	2 cut(s)	1229, 1867
EcoT22I	ATGCAT	2 cut(s)	1093, 1216
EcoT38I	GRGCYC	1 cut(s)	465
ErhI	CCWWGG	2 cut(s)	1229, 1867
FalI	AAGNNNNNCTT	2 cut(s)	1014, 1046
FaqI	GGGAC	1 cut(s)	1650
FauI	CCCGC	2 cut(s)	74, 127
FauNDI	CATATG	1 cut(s)	303
FbaI	TGATCA	1 cut(s)	1774
FblI	GTMKAC	2 cut(s)	156, 692
Fnu4HI	GCNGC	7 cut(s)	6, 479, 981, 984, 1014, 1145, 1322
FokI	GGATG	6 cut(s)	329, 953, 1078, 1223, 1721, 1862
FriOI	GRGCYC	1 cut(s)	465
Fsp4HI	GCNGC	7 cut(s)	6, 479, 981, 984, 1014, 1145, 1322
FspBI	CTAG	3 cut(s)	489, 1034, 1434
GlaI	GCGC	1 cut(s)	1783
GluI	GCNGC	7 cut(s)	6, 479, 981, 984, 1014, 1145, 1322
GsuI	CTGGAG	1 cut(s)	206
HaeII	RGCGCY	1 cut(s)	1785
HaeIII	GGCC	2 cut(s)	779, 919
HapII	CCGG	2 cut(s)	131, 202
HhaI	GCGC	1 cut(s)	1784
Hin6I	GCGC	1 cut(s)	1782
HinP1I	GCGC	1 cut(s)	1782
HincII	GTYRAC	4 cut(s)	157, 757, 1040, 1062
HindII	GTYRAC	4 cut(s)	157, 757, 1040, 1062
HindIII	AAGCTT	1 cut(s)	972
HinfI	GANTC	9 cut(s)	181, 250, 411, 792, 926, 1792, 1816, 1822, 1847
HpaI	GTTAAC	1 cut(s)	757
HpaII	CCGG	2 cut(s)	131, 202
HphI	GGTGA	1 cut(s)	680
Hpy166II	GTNNAC	9 cut(s)	118, 157, 693, 757, 1040, 1062, 1180, 1226, 1494
Hpy188I	TCNGA	7 cut(s)	416, 633, 1293, 1473, 1556, 1799, 1821
Hpy188III	TCNNGA	5 cut(s)	119, 185, 370, 466, 1984
Hpy8I	GTNNAC	9 cut(s)	118, 157, 693, 757, 1040, 1062, 1180, 1226, 1494
Hpy99I	CGWCG	3 cut(s)	161, 164, 172
HpyAV	CCTTC	2 cut(s)	593, 602
HpyCH4III	ACNGT	3 cut(s)	1255, 1511, 1965
HpyCH4IV	ACGT	4 cut(s)	170, 451, 1170, 1302
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 242, 980, 1022, 1027, 1211, 1327, 1363
HpyF3I	CTNAG	6 cut(s)	1026, 1206, 1290, 1595, 1606, 1675
HpySE526I	ACGT	4 cut(s)	170, 451, 1170, 1302
HspAI	GCGC	1 cut(s)	1782
KpnI	GGTACC	1 cut(s)	1254
Ksp22I	TGATCA	1 cut(s)	1774
KspAI	GTTAAC	1 cut(s)	757
Kzo9I	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
LguI	GCTCTTC	1 cut(s)	453
LmnI	GCTCC	7 cut(s)	187, 233, 531, 642, 1327, 1912, 1952
Lsp1109I	GCAGC	5 cut(s)	490, 967, 1025, 1156, 1333
LweI	GCATC	7 cut(s)	183, 232, 1100, 1201, 1223, 1668, 1684
MabI	ACCWGGT	2 cut(s)	213, 814
MaeI	CTAG	3 cut(s)	489, 1034, 1434
MaeII	ACGT	4 cut(s)	170, 451, 1170, 1302
MaeIII	GTNAC	2 cut(s)	217, 1681
MalI	GATC	6 cut(s)	123, 357, 1071, 1125, 1776, 1980
MboI	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
MfeI	CAATTG	1 cut(s)	1703
MflI	RGATCY	1 cut(s)	355
MhlI	GDGCHC	3 cut(s)	41, 465, 1117
MlyI	GAGTC	1 cut(s)	1810
MnlI	CCTC	7 cut(s)	135, 448, 1008, 1201, 1271, 1429, 1552
Mph1103I	ATGCAT	2 cut(s)	1093, 1216
MroXI	GAANNNNTTC	1 cut(s)	1377
MslI	CAYNNNNRTG	1 cut(s)	371
MspA1I	CMGCKG	2 cut(s)	986, 1679
MspI	CCGG	2 cut(s)	131, 202
MspR9I	CCNGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
MunI	CAATTG	1 cut(s)	1703
Mva1269I	GAATGC	1 cut(s)	1590
MvaI	CCWGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
MvnI	CGCG	1 cut(s)	50
MwoI	GCNNNNNNNGC	8 cut(s)	92, 242, 980, 1022, 1027, 1211, 1327, 1363
NcoI	CCATGG	2 cut(s)	1229, 1867
NdeI	CATATG	1 cut(s)	303
NdeII	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
NlaIV	GGNNCC	6 cut(s)	1252, 1260, 1416, 1618, 1914, 1948
NmeAIII	GCCGAG	1 cut(s)	1909
NmuCI	GTSAC	1 cut(s)	1681
NsiI	ATGCAT	2 cut(s)	1093, 1216
NspI	RCATGY	2 cut(s)	485, 1091
PacI	TTAATTAA	1 cut(s)	441
PagI	TCATGA	2 cut(s)	369, 1983
PaqCI	CACCTGC	1 cut(s)	1211
PasI	CCCWGGG	1 cut(s)	1055
PciSI	GCTCTTC	1 cut(s)	453
PcsI	WCGNNNNNNNCGW	1 cut(s)	176
PctI	GAATGC	1 cut(s)	1590
PdmI	GAANNNNTTC	1 cut(s)	1377
PfeI	GAWTC	8 cut(s)	181, 250, 411, 792, 926, 1792, 1822, 1847
PflMI	CCANNNNNTGG	1 cut(s)	976
PfoI	TCCNGGA	2 cut(s)	330, 1737
PkrI	GCNGC	7 cut(s)	7, 480, 982, 985, 1015, 1146, 1323
PleI	GAGTC	1 cut(s)	1810
PpsI	GAGTC	1 cut(s)	1810
Ppu21I	YACGTR	1 cut(s)	452
PshBI	ATTAAT	2 cut(s)	567, 1389
Psp124BI	GAGCTC	1 cut(s)	465
Psp1406I	AACGTT	1 cut(s)	1170
Psp6I	CCWGG	9 cut(s)	174, 213, 231, 330, 814, 1054, 1440, 1585, 1737
PspGI	CCWGG	9 cut(s)	174, 213, 231, 330, 814, 1054, 1440, 1585, 1737
PspN4I	GGNNCC	6 cut(s)	1252, 1260, 1416, 1618, 1914, 1948
PspPI	GGNCC	3 cut(s)	917, 1226, 1491
PsrI	GAACNNNNNNTAC	2 cut(s)	99, 131
PstI	CTGCAG	2 cut(s)	852, 1222
PstNI	CAGNNNCTG	1 cut(s)	1613
PsuI	RGATCY	1 cut(s)	355
PvuII	CAGCTG	1 cut(s)	1679
RsaI	GTAC	8 cut(s)	450, 783, 813, 1179, 1252, 1384, 1395, 1604
RsaNI	GTAC	8 cut(s)	449, 782, 812, 1178, 1251, 1383, 1394, 1603
RseI	CAYNNNNRTG	1 cut(s)	371
SacI	GAGCTC	1 cut(s)	465
SalI	GTCGAC	1 cut(s)	155
SapI	GCTCTTC	1 cut(s)	453
SatI	GCNGC	7 cut(s)	6, 479, 981, 984, 1014, 1145, 1322
Sau3AI	GATC	6 cut(s)	121, 355, 1069, 1123, 1774, 1978
Sau96I	GGNCC	3 cut(s)	917, 1226, 1491
SchI	GAGTC	1 cut(s)	1810
ScrFI	CCNGG	9 cut(s)	176, 215, 233, 332, 816, 1056, 1442, 1587, 1739
SduI	GDGCHC	3 cut(s)	41, 465, 1117
SexAI	ACCWGGT	2 cut(s)	213, 814
SfaNI	GCATC	7 cut(s)	183, 232, 1100, 1201, 1223, 1668, 1684
SfcI	CTRYAG	5 cut(s)	848, 921, 1044, 1119, 1218
SgrAI	CRCCGGYG	1 cut(s)	201
SinI	GGWCC	2 cut(s)	1226, 1491
SmiMI	CAYNNNNRTG	1 cut(s)	371
SmlI	CTYRAG	2 cut(s)	34, 464
SmoI	CTYRAG	2 cut(s)	34, 464
SsiI	CCGC	8 cut(s)	5, 48, 81, 113, 134, 984, 1234, 1714
SspMI	CTAG	3 cut(s)	489, 1034, 1434
SstI	GAGCTC	1 cut(s)	465
StyD4I	CCNGG	9 cut(s)	174, 213, 231, 330, 814, 1054, 1440, 1585, 1737
StyI	CCWWGG	2 cut(s)	1229, 1867
TaaI	ACNGT	3 cut(s)	1255, 1511, 1965
TaiI	ACGT	4 cut(s)	173, 454, 1173, 1305
TaqI	TCGA	3 cut(s)	156, 1699, 1831
TatI	WGTACW	2 cut(s)	1177, 1393
TauI	GCSGC	2 cut(s)	8, 986
TfiI	GAWTC	8 cut(s)	181, 250, 411, 792, 926, 1792, 1822, 1847
TscAI	CASTG	4 cut(s)	652, 754, 1501, 1618
TseFI	GTSAC	1 cut(s)	1681
TseI	GCWGC	5 cut(s)	478, 980, 1013, 1144, 1321
Tsp45I	GTSAC	1 cut(s)	1681
TspDTI	ATGAA	5 cut(s)	290, 419, 675, 821, 1297
TspGWI	ACGGA	1 cut(s)	1573
TspRI	CASTG	4 cut(s)	652, 754, 1501, 1618
Van91I	CCANNNNNTGG	1 cut(s)	976
VpaK11BI	GGWCC	2 cut(s)	1226, 1491
VspI	ATTAAT	2 cut(s)	567, 1389
XagI	CCTNNNNNAGG	1 cut(s)	1758
XapI	RAATTY	2 cut(s)	854, 993
XceI	RCATGY	2 cut(s)	485, 1091
XmiI	GTMKAC	2 cut(s)	156, 692
XmnI	GAANNNNTTC	1 cut(s)	1377
XspI	CTAG	3 cut(s)	489, 1034, 1434
Zsp2I	ATGCAT	2 cut(s)	1093, 1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.