RchiOBHm_Chr5g0000681

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0010534
Physical Location & Seq
Forward (+)
384605 .. 387737
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28221

Sequence Viewer

Length: 2076 bp
ATGAATTGTATGCCATCGAAAAACATATGGATTCGGCGGCAACAATGCCCATGTGGGGATTGGAAATGTTATGTTACATATGAGGGAGACTCTGAAGAGACCTCCCTTGCAGCCCAATTGGTAAAGAATGATACTTCAACCTCAGAAGCTATGGTTTCACCTTATGTTGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAGTATTATGGCAATTTCGCTAGAAAAAATGGGTTTTCTATTAGGAAAGAGAGGTCCAGACTTAGCCCACAGTTGGGTATTTATAAGCGTGACTTTGTTTGCTATCGGTCTGGGTTTGCTCCGGCCAAGAAGAAGCCAACAGGGGAACACCATAGGGATAGGAAGTCGGTTCGGTGTGGATGTGATGCAAAAATGTATTTGTCAAAGGAGGTTGTTGATGGGGTTTCTCAATGGTTTGTTGTCCAATTTAGTAACGTGCATAATCATGAGCTTTTGGAAGATGATCAAGTACGCCTCCTTCCTGCTTATCGTAAAATTCAAGAGGCGGATCAACAGCGGATACTGTTACTTTCCAAAGCTGGGTTCCCTATACATCGGATAGTGAAGGTGTTGGAGTTGGAAAAGGGGATTCAAGGCGGACAGTTGCCCTTTTTAGAGAGGGATGTCAGAAACTTTGTCCAAAATCGTAAGAAGGTTGTTCAAGAAAATGATGCCTTGATCACTGAAAAAAGGGAAAATGATACACTAGAACTTCTTGAGGCATGCAAGGTAACAAAGGAGGCTGATGAAGACTTTGTTTATGATTTTACAGTTGATGAGAATGATAAGGTGGAACACATTGCATGGTCTTATGGTGATTCAGTCCATGCGTATACTATGTTTGGTGATGCAGTTTATTTTGACACTATGTATCAATCAATCACATATGGCATGCTTTTTGGAGCATGGCTTGGCATCGACAACCATGGAAGAACCATTTTCTTTGGTTGTGTTCTGCTGCAAGATGAAACACCTCGTTCCTTCTCATGGGCTTTACAGACTTTTGTTCGTTTCATGAGAGGAAGATGGCCACAAACAATTATAACTGATCTTGATACCGGGCTTAGAGATGCAATAACAAGTGAACTGCCTAACACTAAGCATGTCATTTCTCTGTGGAATATTCTTCCTAAGGTATCCAGCTGGTTCTCTGTATCACTTGGATCTCGATATGCAGAGTTTAAATCTGAGCTTGACGTTTTATATCGGGTGGAGAGTACAGAGGATTTTGAACTCCAATGGAATCAAATGAATTTAATATACGGCTTATCTACAGATAAGCACATTGCTTTACTTCATTCATTTCGGGCATCTTGGGCTTTGTGCTATATGAGGGGTTGCTTTGTCGCTAGAATGGCAACAACAGATTATTCAAAGTCTATAGAAGCATTCTTAAAAGGTGTTTTCAGCACACAAACGTGTCTGCGCAGCTTTTTCGAGCAGGTTGGTATTTCTGCCAATTTTCAAAATCAGGCACGTCGAGAGATGCAGTATATGCATACAAAAACATGCATTCCCATTGAAGAGCACGCAAGGAGTATTTTGACGCCTTTTGCCTTCAATGCTTTGCAGCGTGAGCTTGTGCTTGCCATGCAGTATGCAGTATCTGAAATGCCCAATGGATCATGTATTGTTCGCCATTTCAAGGAGATAGATGGAGAACGTCTCGTGATTTGGATACCAGAAGATGAACAGATTCACTGTTCCTGTAAAGAGTTTGAATCTTCAGGACTACTGTGCAGACATTTGTTGCGGGTATTTATAGTAAAGAACTACTTTCAGCTTCCTGACAAGTACTATTTGAACAGATGGCAGAGAGAAAGCTCTCTTGATTTTTATGATCCCCACATTACTCAAAATAGTGATGATCAATGGTATCAAGATTATCAGTGTCTGGCTGAAACGCTGTTTACAGAATCTTCAATCACAAAGGAGCGTTCTGAGTATGTTCAAAGGGAAGTGACAACACATCTCACAAGGATTCTTAATGAGGTTAGAAACATGCCAGAATCTGAAGGAGTCGCTATGGATCTGACATTTTCCCCTGCTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

691

Amino Acids

80.35

Weight (kDa)

5.78

Isoelectric Point (pI)

45.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 68 - 159 2.3e-22 FAR1 DNA-binding domain
HTH_FAR1 PF26175 172 - 226 2.6e-25 FAR1 HTH-like domain
ZSWIM1-3_RNaseH-like PF21056 256 - 374 2.2e-08 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 292 - 383 2.6e-17 MULE transposase domain
SWIM PF04434 570 - 598 3.3e-07 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 285, 1064
Acc16I TGCGCA 1 cut(s) 1448
Acc36I ACCTGC 1 cut(s) 1453
AccI GTMKAC 1 cut(s) 854
AciI CCGC 5 cut(s) 37, 527, 538, 618, 1774
AclWI GGATC 5 cut(s) 537, 1192, 1651, 1856, 2058
AcoI YGGCCR 2 cut(s) 324, 1049
AcsI RAATTY 2 cut(s) 516, 1273
AcuI CTGAAG 3 cut(s) 114, 1731, 2055
AcyI GRCGYC 1 cut(s) 1568
AfaI GTAC 3 cut(s) 492, 1240, 1817
AfiI CCNNNNNNNGG 7 cut(s) 55, 167, 274, 275, 561, 1008, 1666
AflIII ACRYGT 1 cut(s) 1439
AjiI CACGTC 1 cut(s) 1499
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
AleI CACNNNNGTG 1 cut(s) 1438
AluBI AGCT 9 cut(s) 149, 472, 560, 1164, 1213, 1452, 1600, 1804, 1845
AluI AGCT 9 cut(s) 149, 472, 560, 1164, 1213, 1452, 1600, 1804, 1845
Alw21I GWGCWC 1 cut(s) 1551
Alw26I GTCTC 3 cut(s) 81, 92, 1691
AlwI GGATC 5 cut(s) 537, 1192, 1651, 1856, 2058
AlwNI CAGNNNCTG 3 cut(s) 1628, 1915, 2033
AoxI GGCC 2 cut(s) 324, 1049
ApeKI GCWGC 4 cut(s) 110, 979, 1449, 1591
ApoI RAATTY 2 cut(s) 516, 1273
Asp700I GAANNNNTTC 1 cut(s) 1716
AspLEI GCGC 1 cut(s) 1449
AspS9I GGNCC 1 cut(s) 255
AsuC2I CCSGG 1 cut(s) 1081
AsuHPI GGTGA 3 cut(s) 150, 848, 878
AvaII GGWCC 1 cut(s) 255
AxyI CCTNAGG 1 cut(s) 1152
BalI TGGCCA 1 cut(s) 1051
BarI GAAGNNNNNNTAC 2 cut(s) 483, 515
BauI CACGAG 1 cut(s) 1688
BbsI GAAGAC 1 cut(s) 777
Bbv12I GWGCWC 1 cut(s) 1551
BbvI GCAGC 4 cut(s) 122, 966, 1461, 1603
BccI CCATC 5 cut(s) 22, 413, 1041, 1670, 1824
BceAI ACGGC 1 cut(s) 1300
BcgI CGANNNNNNTGC 2 cut(s) 1438, 1472
BciVI GTATCC 3 cut(s) 534, 1168, 1692
BclI TGATCA 3 cut(s) 484, 699, 1888
BcnI CCSGG 1 cut(s) 1081
BcoDI GTCTC 3 cut(s) 81, 92, 1691
BfaI CTAG 3 cut(s) 222, 728, 1371
BfmI CTRYAG 2 cut(s) 1293, 1401
BfuAI ACCTGC 1 cut(s) 1453
BfuI GTATCC 3 cut(s) 534, 1168, 1692
BisI GCNGC 5 cut(s) 38, 111, 980, 1450, 1592
BlsI GCNGC 5 cut(s) 39, 112, 981, 1451, 1593
BmcAI AGTACT 1 cut(s) 1817
Bme1390I CCNGG 1 cut(s) 1081
Bme18I GGWCC 1 cut(s) 255
BmgBI CACGTC 1 cut(s) 1499
BmgT120I GGNCC 1 cut(s) 255
BmiI GGNNCC 1 cut(s) 566
BmrFI CCNGG 1 cut(s) 1081
BmsI GCATC 8 cut(s) 184, 376, 682, 859, 945, 1081, 1340, 1497
BpiI GAAGAC 1 cut(s) 777
BplI GAGNNNNNCTC 4 cut(s) 74, 106, 1671, 1703
BpuEI CTTGAG 1 cut(s) 758
BpuMI CCSGG 1 cut(s) 1081
BsaHI GRCGYC 1 cut(s) 1568
BsaI GGTCTC 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 946
Bsc4I CCNNNNNNNGG 7 cut(s) 55, 167, 274, 275, 561, 1008, 1666
Bse21I CCTNAGG 1 cut(s) 1152
Bse3DI GCAATG 2 cut(s) 819, 1305
BseDI CCNNGG 1 cut(s) 946
BseGI GGATG 2 cut(s) 386, 649
BseLI CCNNNNNNNGG 7 cut(s) 55, 167, 274, 275, 561, 1008, 1666
BseMI GCAATG 2 cut(s) 819, 1305
BseMII CTCAG 3 cut(s) 156, 1200, 1953
BseXI GCAGC 4 cut(s) 122, 966, 1461, 1603
BseYI CCCAGC 1 cut(s) 560
BsgI GTGCAG 1 cut(s) 1780
BshFI GGCC 2 cut(s) 326, 1051
BsiHKAI GWGCWC 1 cut(s) 1551
BsiSI CCGG 2 cut(s) 323, 1080
BslI CCNNNNNNNGG 7 cut(s) 55, 167, 274, 275, 561, 1008, 1666
BsmAI GTCTC 3 cut(s) 81, 92, 1691
BsmBI CGTCTC 1 cut(s) 1691
BsmI GAATGC 2 cut(s) 1409, 1533
BsnI GGCC 2 cut(s) 326, 1051
Bso31I GGTCTC 1 cut(s) 92
Bsp1286I GDGCHC 1 cut(s) 1551
Bsp143I GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
Bsp19I CCATGG 1 cut(s) 946
BspACI CCGC 5 cut(s) 37, 527, 538, 618, 1774
BspANI GGCC 2 cut(s) 326, 1051
BspCNI CTCAG 3 cut(s) 155, 1201, 1954
BspHI TCATGA 2 cut(s) 466, 1035
BspLI GGNNCC 1 cut(s) 566
BspMI ACCTGC 1 cut(s) 1453
BspPI GGATC 5 cut(s) 537, 1192, 1651, 1856, 2058
BspQI GCTCTTC 1 cut(s) 1539
BspTNI GGTCTC 1 cut(s) 92
BsrDI GCAATG 2 cut(s) 819, 1305
BssECI CCNNGG 1 cut(s) 946
BssMI GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
BssNAI GTATAC 1 cut(s) 855
BssNI GRCGYC 1 cut(s) 1568
BssSI CACGAG 1 cut(s) 1688
BssT1I CCWWGG 1 cut(s) 946
Bst1107I GTATAC 1 cut(s) 855
Bst2BI CACGAG 1 cut(s) 1688
Bst4CI ACNGT 6 cut(s) 273, 546, 624, 793, 1724, 1758
Bst6I CTCTTC 2 cut(s) 90, 1539
BstACI GRCGYC 1 cut(s) 1568
BstAPI GCANNNNNTGC 1 cut(s) 1516
BstC8I GCNNGC 4 cut(s) 745, 914, 1551, 1608
BstDEI CTNAG 7 cut(s) 142, 263, 1085, 1119, 1152, 1209, 1962
BstDSI CCRYGG 1 cut(s) 946
BstF5I GGATG 2 cut(s) 386, 649
BstHHI GCGC 1 cut(s) 1449
BstKTI GATC 9 cut(s) 487, 532, 702, 1072, 1187, 1646, 1864, 1891, 2053
BstMAI GTCTC 3 cut(s) 81, 92, 1691
BstMBI GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
BstMWI GCNNNNNNNGC 6 cut(s) 1337, 1376, 1516, 1583, 1597, 1612
BstNSI RCATGY 5 cut(s) 747, 916, 1127, 1533, 2026
BstSCI CCNGG 1 cut(s) 1079
BstSFI CTRYAG 2 cut(s) 1293, 1401
BstV1I GCAGC 4 cut(s) 122, 966, 1461, 1603
BstV2I GAAGAC 1 cut(s) 777
BstX2I RGATCY 2 cut(s) 1184, 2050
BstYI RGATCY 2 cut(s) 1184, 2050
BstZ17I GTATAC 1 cut(s) 855
Bsu36I CCTNAGG 1 cut(s) 1152
BsuI GTATCC 3 cut(s) 534, 1168, 1692
BsuRI GGCC 2 cut(s) 326, 1051
BtgI CCRYGG 1 cut(s) 946
BtrI CACGTC 1 cut(s) 1499
BtsCI GGATG 2 cut(s) 386, 649
BtsIMutI CAGTG 3 cut(s) 702, 1720, 1916
BveI ACCTGC 1 cut(s) 1453
Cac8I GCNNGC 4 cut(s) 745, 914, 1551, 1608
CaiI CAGNNNCTG 3 cut(s) 1628, 1915, 2033
CciI TCATGA 2 cut(s) 466, 1035
CfoI GCGC 1 cut(s) 1449
Cfr13I GGNCC 1 cut(s) 255
CseI GACGC 1 cut(s) 1576
Csp6I GTAC 3 cut(s) 491, 1239, 1816
CviQI GTAC 3 cut(s) 491, 1239, 1816
DdeI CTNAG 7 cut(s) 142, 263, 1085, 1119, 1152, 1209, 1962
DpnI GATC 9 cut(s) 486, 531, 701, 1071, 1186, 1645, 1863, 1890, 2052
DpnII GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
DraI TTTAAA 1 cut(s) 1204
EaeI YGGCCR 2 cut(s) 324, 1049
Eam1104I CTCTTC 2 cut(s) 90, 1539
EarI CTCTTC 2 cut(s) 90, 1539
EciI GGCGGA 2 cut(s) 542, 633
Eco130I CCWWGG 1 cut(s) 946
Eco31I GGTCTC 1 cut(s) 92
Eco47I GGWCC 1 cut(s) 255
Eco57I CTGAAG 3 cut(s) 114, 1731, 2055
Eco81I CCTNAGG 1 cut(s) 1152
EcoT14I CCWWGG 1 cut(s) 946
EcoT22I ATGCAT 3 cut(s) 199, 1521, 1535
ErhI CCWWGG 1 cut(s) 946
Esp3I CGTCTC 1 cut(s) 1691
FalI AAGNNNNNCTT 4 cut(s) 278, 310, 1781, 1813
FauI CCCGC 1 cut(s) 1767
FauNDI CATATG 3 cut(s) 26, 79, 907
FbaI TGATCA 3 cut(s) 484, 699, 1888
FblI GTMKAC 1 cut(s) 854
Fnu4HI GCNGC 5 cut(s) 38, 111, 980, 1450, 1592
FokI GGATG 2 cut(s) 393, 656
Fsp4HI GCNGC 5 cut(s) 38, 111, 980, 1450, 1592
FspBI CTAG 3 cut(s) 222, 728, 1371
FspI TGCGCA 1 cut(s) 1448
GlaI GCGC 1 cut(s) 1448
GluI GCNGC 5 cut(s) 38, 111, 980, 1450, 1592
GsaI CCCAGC 1 cut(s) 564
HaeIII GGCC 2 cut(s) 326, 1051
HapII CCGG 2 cut(s) 323, 1080
HgaI GACGC 1 cut(s) 1576
HhaI GCGC 1 cut(s) 1449
Hin1I GRCGYC 1 cut(s) 1568
Hin6I GCGC 1 cut(s) 1447
HinP1I GCGC 1 cut(s) 1447
HpaII CCGG 2 cut(s) 323, 1080
HphI GGTGA 3 cut(s) 150, 848, 878
Hpy166II GTNNAC 3 cut(s) 855, 1106, 1932
Hpy188I TCNGA 9 cut(s) 94, 145, 579, 650, 1210, 1630, 1963, 2035, 2055
Hpy8I GTNNAC 3 cut(s) 855, 1106, 1932
Hpy99I CGWCG 1 cut(s) 1503
HpyAV CCTTC 6 cut(s) 509, 580, 667, 1012, 1588, 2030
HpyCH4III ACNGT 6 cut(s) 273, 546, 624, 793, 1724, 1758
HpyCH4IV ACGT 5 cut(s) 456, 1218, 1439, 1498, 1684
HpyF10VI GCNNNNNNNGC 6 cut(s) 1337, 1376, 1516, 1583, 1597, 1612
HpyF3I CTNAG 7 cut(s) 142, 263, 1085, 1119, 1152, 1209, 1962
HpySE526I ACGT 5 cut(s) 456, 1218, 1439, 1498, 1684
Hsp92I GRCGYC 1 cut(s) 1568
HspAI GCGC 1 cut(s) 1447
Ksp22I TGATCA 3 cut(s) 484, 699, 1888
Kzo9I GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
LguI GCTCTTC 1 cut(s) 1539
LmnI GCTCC 3 cut(s) 325, 923, 1954
Lsp1109I GCAGC 4 cut(s) 122, 966, 1461, 1603
LweI GCATC 8 cut(s) 184, 376, 682, 859, 945, 1081, 1340, 1497
MaeI CTAG 3 cut(s) 222, 728, 1371
MaeII ACGT 5 cut(s) 456, 1218, 1439, 1498, 1684
MaeIII GTNAC 6 cut(s) 73, 290, 452, 546, 751, 1981
MalI GATC 9 cut(s) 486, 531, 701, 1071, 1186, 1645, 1863, 1890, 2052
MboI GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
MfeI CAATTG 1 cut(s) 116
MflI RGATCY 2 cut(s) 1184, 2050
MhlI GDGCHC 1 cut(s) 1551
MlsI TGGCCA 1 cut(s) 1051
MluCI AATT 8 cut(s) 4, 116, 214, 446, 516, 1059, 1273, 1480
MluNI TGGCCA 1 cut(s) 1051
MlyI GAGTC 2 cut(s) 83, 2049
MmeI TCCRAC 3 cut(s) 148, 573, 579
Mox20I TGGCCA 1 cut(s) 1051
Mph1103I ATGCAT 3 cut(s) 199, 1521, 1535
MroXI GAANNNNTTC 1 cut(s) 1716
MscI TGGCCA 1 cut(s) 1051
MseI TTAA 6 cut(s) 180, 1203, 1277, 1415, 2007, 2074
MslI CAYNNNNRTG 2 cut(s) 465, 1438
Msp20I TGGCCA 1 cut(s) 1051
MspA1I CMGCKG 2 cut(s) 538, 1164
MspI CCGG 2 cut(s) 323, 1080
MspR9I CCNGG 1 cut(s) 1081
MunI CAATTG 1 cut(s) 116
Mva1269I GAATGC 2 cut(s) 1409, 1533
MwoI GCNNNNNNNGC 6 cut(s) 1337, 1376, 1516, 1583, 1597, 1612
NciI CCSGG 1 cut(s) 1081
NcoI CCATGG 1 cut(s) 946
NdeI CATATG 3 cut(s) 26, 79, 907
NdeII GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
NlaIV GGNNCC 1 cut(s) 566
NmuCI GTSAC 2 cut(s) 290, 1981
NsbI TGCGCA 1 cut(s) 1448
NsiI ATGCAT 3 cut(s) 199, 1521, 1535
NspI RCATGY 5 cut(s) 747, 916, 1127, 1533, 2026
OliI CACNNNNGTG 1 cut(s) 1438
PaeI GCATGC 2 cut(s) 747, 916
PagI TCATGA 2 cut(s) 466, 1035
PciSI GCTCTTC 1 cut(s) 1539
PctI GAATGC 2 cut(s) 1409, 1533
PdmI GAANNNNTTC 1 cut(s) 1716
PfeI GAWTC 9 cut(s) 31, 610, 839, 1264, 1717, 1742, 1937, 2002, 2030
PkrI GCNGC 5 cut(s) 39, 112, 981, 1451, 1593
PleI GAGTC 2 cut(s) 83, 2048
PpsI GAGTC 2 cut(s) 83, 2048
PsiI TTATAA 2 cut(s) 285, 1064
PspFI CCCAGC 1 cut(s) 560
PspN4I GGNNCC 1 cut(s) 566
PspPI GGNCC 1 cut(s) 255
PstNI CAGNNNCTG 3 cut(s) 1628, 1915, 2033
PsuI RGATCY 2 cut(s) 1184, 2050
PvuII CAGCTG 1 cut(s) 1164
RsaI GTAC 3 cut(s) 492, 1240, 1817
RsaNI GTAC 3 cut(s) 491, 1239, 1816
RseI CAYNNNNRTG 2 cut(s) 465, 1438
SapI GCTCTTC 1 cut(s) 1539
SaqAI TTAA 6 cut(s) 180, 1203, 1277, 1415, 2007, 2074
SatI GCNGC 5 cut(s) 38, 111, 980, 1450, 1592
Sau3AI GATC 9 cut(s) 484, 529, 699, 1069, 1184, 1643, 1861, 1888, 2050
Sau96I GGNCC 1 cut(s) 255
ScaI AGTACT 1 cut(s) 1817
SchI GAGTC 2 cut(s) 83, 2049
ScrFI CCNGG 1 cut(s) 1081
SduI GDGCHC 1 cut(s) 1551
SfaNI GCATC 8 cut(s) 184, 376, 682, 859, 945, 1081, 1340, 1497
SfcI CTRYAG 2 cut(s) 1293, 1401
SinI GGWCC 1 cut(s) 255
SmiMI CAYNNNNRTG 2 cut(s) 465, 1438
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
SphI GCATGC 2 cut(s) 747, 916
Sse9I AATT 8 cut(s) 4, 116, 214, 446, 516, 1059, 1273, 1480
SsiI CCGC 5 cut(s) 37, 527, 538, 618, 1774
SspI AATATT 1 cut(s) 1144
SspMI CTAG 3 cut(s) 222, 728, 1371
StyD4I CCNGG 1 cut(s) 1079
StyI CCWWGG 1 cut(s) 946
TaaI ACNGT 6 cut(s) 273, 546, 624, 793, 1724, 1758
TaiI ACGT 5 cut(s) 459, 1221, 1442, 1501, 1687
TaqI TCGA 5 cut(s) 17, 939, 1189, 1458, 1501
TaqII GACCGA 1 cut(s) 297
TasI AATT 8 cut(s) 4, 116, 214, 446, 516, 1059, 1273, 1480
TatI WGTACW 2 cut(s) 1238, 1815
TauI GCSGC 1 cut(s) 40
TfiI GAWTC 9 cut(s) 31, 610, 839, 1264, 1717, 1742, 1937, 2002, 2030
Tru1I TTAA 6 cut(s) 180, 1203, 1277, 1415, 2007, 2074
Tru9I TTAA 6 cut(s) 180, 1203, 1277, 1415, 2007, 2074
TscAI CASTG 3 cut(s) 709, 1727, 1916
TseFI GTSAC 2 cut(s) 290, 1981
TseI GCWGC 4 cut(s) 110, 979, 1449, 1591
Tsp45I GTSAC 2 cut(s) 290, 1981
TspDTI ATGAA 8 cut(s) 17, 783, 1002, 1024, 1286, 1307, 1311, 1725
TspRI CASTG 3 cut(s) 709, 1727, 1916
VpaK11BI GGWCC 1 cut(s) 255
XapI RAATTY 2 cut(s) 516, 1273
XceI RCATGY 5 cut(s) 747, 916, 1127, 1533, 2026
XcmI CCANNNNNNNNNTGG 1 cut(s) 57
XmiI GTMKAC 1 cut(s) 854
XmnI GAANNNNTTC 1 cut(s) 1716
XspI CTAG 3 cut(s) 222, 728, 1371
ZrmI AGTACT 1 cut(s) 1817
Zsp2I ATGCAT 3 cut(s) 199, 1521, 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.