Rorug04G0385800

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0010534
Physical Location & Seq
Reverse (-)
55573946 .. 55579017
5072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0385800.1

Sequence Viewer

Length: 3399 bp
ATGAGATGGTGTGGCCTCAGAAACACCCTGTTTTCCCTCAAAGTCTTCTCCTTTTTGTTGTGCTTTTCAGTTTCCGGCGACAGAAACCGCTGGTCGGAGAAGTCGGTTCTGCTCGAGCTGAAGACCTCGGTGTCGGACCCAGATGGGGTTCTGTCCACCTGGGCCCACGGCAGCTCTGATCACCACTGTTCCTGGTTCGGGGTCTCCTGCGACTCGAAATCCAAGGTTGTCTCGCTCAGCATAGCCGGGAGTAGTGAAAATAAAGGAGGTAACTTTGAAGCTTTTACTTGCTCTGAGACTGTGAGATTTCAATTTCAGTTCGATGGGTTTGGGGCTTGGAGGAGGAGGAGTGGTGGGAAATTAGGTGGAAAGCTTTCACCTTTGGTTGGGAAACTTACTGAGCTTAGAGTTTTATCGCTGCCGTTTAATGAACTTAGTGGTGAGATTCCCAAGGAGGTTTGGGGGTTAGAGAAACTTGAAGTGCTTGATCTTGAGGGTAATTTGTTGGAGGGGAAGTTGCCGAGTTGGTTCTCGGGTTTGAGAAAGTTGAGGGTTTTGAATGTTGGGTTTAATAGGATTGTTGGGGAGGTTCCGGTTTCGCTTTCGAAATGTAGGGATTTGGAGGTTTTGAGTTTAGCTGGAAATGAAGTGAGTGGAGCCATTCCTGTGTTTTTTGGTGGTTTTGCAAAGTTGCAGGGGCTTTATTTGGCTCAAAATAGGTTGAATGGATCTATTCCGGCCAAATTTGGTAGGTCTTGTTTGAATCTTGAGCATTTTGATGTGTCGGGGAATTTCCTTGTTGGGAAGATTCCGCCTACTTTGGGGACTTGTGTGCGGTTACGGACACTGTTGTTGTTTTCGAATACTCTGGACGGTGGCATTCCTGGTGAACTTGGTAAGATTCGGGGGCTTGAAGTTCTGGATGTGTCTAGAAATAGCCTTAGCGGTCCAATCCCCGCTGAGCTCGGACAATGTGTCAATTTGTCGGTACTTGTCCTGTCGAATCTCTTTAATCCGTTGCCAATCAATCAGAATGCAAATGGAGATTCATCGGTTGAGTTATATAAAGGAGTGGATGATGATTACAATTTTTATGAAGGCTCCATTCCCCAGGAGATTACAAGCTTACCAAATTTGAGAATAGTTTGGGCACCAAGGGCAACCCTCGAAGGCCAGCTTCCGAGCAATTGGGGTGGTTGTGAGAACTTGGAAATGGTGAACTTGGCTCAGAACCTTTTCACTGGAGAAGTGATTGGAGTGTTTGATAGATGCAAGAAGCTGCAGTATCTGAATTTGAGCTCAAATAAGCTGAGTGGGAAGCTTGATGACAAACTCCCAGTTCCTTGTATGACTGTTTTCAGTGTCAGTGGGAACCTCTTGTTTGGATCCATCCCCACATTTAATTTCGCAGTGTGCCCCCACGTGCCCCGAAATTCAGATCTTGTCCGAGTCCAGAATCCATCATTTGCATATCAAGTTCTCTTTACTTGCAGAACTTATCTTGACACCCATTTACCACTTTTTGGTGCTAGTTTCACATTGATTCACGATTTTAGTGGTAACAACTTCACTGGTCCAATCCAACACCTTCCTCTTGCACGTGAGAGATTGGGGAAGCGAACTGTTTATGCATTTCTTGCTGGTGGGAACAAGTTCACTGGATCATTTGCTGAAACCTTAAAAGGAAAGTGTGATGGCTTACATGGAATGATATTTAATGTTAGCAACAACAAGTTATCAGGCCACATTCCTTTCAAGATTGGCATGATTTGCAGATCTCTTAGACTCTTGGATGCCTCTGGAAATCTCTTATCTGGGTCAATACCTCCAGATCTTGGGGATGTGAAGCCTCTTGTCTTTCTTGACTTGAGCAGGAACCAGTTGCAGGGTCAAATTCCCGCAGGTATCAGTAATTTGAAGTATCTCAAGTATCTGTCCTTGGCTAATAACAACCTTACTGGTACGATTCCTGCTAGCTTTGTGGAGTTACGCTCCCTTGAAGTGTTAAAGCTATCTTCAAACTCTCTTTCTGGTGATATCCCGCAAGGTCTTGTTAAGTTGAAAAACCTAACTATTTTTATGCTTGACAACAATAAGCTCTCTGGCCGCATCCCTTCTGGTTTGACTAATGTGAGATCCCTGTCTACATTTAATGTCTCATATAATAACCTGTCTGGTTCATTTCCATTGAACAATAATATGATGAACTGTAGCGGTGTCCTTGGAAACCCTTTCGTTAATCAATGCCGCATTGTTTCCCTCGCTGCGCCATACTCAGCTCAGCCAGGTAGCTCTGCCAATTCACCACCAGGTAGTTCTGAGATTCAGTCAGCAAGTGCTCCTGGAAAGGATGGAATAAACTCAATTGAGATTGCATCCATAGTATCTGCATCAGCTGTCGTGTTGGTTCTCTTCACTCTTGTTATCCTCTTCTTTTACACAAGAAAATGGATTCCAGATTCCAGAGTTCAGGGTTTTGAAAATAAAGAAATTACAATTTTCACGGAAATTGGGGCACCATTGACGTTTGAGAATATTGTTCAAGCAACAGGGAATTTTAATGCCAGTAACTACATTGGGAGTGGAGGATTTGGGGCAACTTACAAAGCAGAAATCACTCCAGGAACCATAATAGCTGTAAAGAGGCTTGCCGTTGGAAGGTTTCACGGTGTTCAACAGTTCCATGCTGAGATTAAGACCCTCGGAAGGGTGAGACACCCCAACCTGGTAACTTTAATAGGTTACCATGCCAGTGAAACCGAGATGCTACTCATATATAATTATTTACCAGGAGGGAATTTGGAAAATTTTATTCAGGAAAGATCTAGAAGATCTTTTACTTGGAAGATTCTCCACAAGATTGCTCTGGATATTGCCCATGCACTTTCTTATCTGCATGATGAGTGTATCCCGCGTGTCCTACACCGTGATGTCAAGCCAAGCAATATACTGTTAGATGATAACTTGAATGCTTATTTGTCTGACTTTGGATTGTCTAGGCTGCTGGGAACTTCTGAAACGCATGCTACAACTGGTGTTGCAGGAACTTTTGGGTATGTAGCACCCGAGTATGCTATGACCTGTCGTGTGTCTGAGAAGGCTGATGTTTACAGTTACGGTGTTGTGCTGCTTGAATTGATTTCTGATAAGAAAGCCCTGGACCCATCATTTTCTTCACATGGAAATGGTTTCAACATTGTTTCTTGGGCGTGCATGCTGTTAAGAATGGGTCGGGCTAAGGACGTATTCATGGAAGGACTATGGGAGGCCGGACCTGAAGATGATCTGGTTGAGATGCTGTACTTGGCTGTCAAATGTACTGTTGAGACCCTCTCCATTAGGCCTACAATGAAGCAAGTTGTCCAAATACTGAAGCGAATACAACCTGCTTCAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

1132

Amino Acids

123.6

Weight (kDa)

8.59

Isoelectric Point (pI)

31.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 71 8.4e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 129 - 215 5.9e-09 Leucine-rich repeat region
LRR_14 PF23598 593 - 718 2.5e-10 Leucine-rich repeat region
LRR_8 PF13855 621 - 676 4.6e-09 Leucine rich repeat
Pkinase PF00069 855 - 1056 5.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 856 - 1123 8.4e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 130
Acc36I ACCTGC 2 cut(s) 1892, 3394
AccB1I GGYRCC 2 cut(s) 1150, 2515
AccB7I CCANNNNNTGG 2 cut(s) 1523, 1835
AccI GTMKAC 1 cut(s) 2144
AccII CGCG 1 cut(s) 2914
AclWI GGATC 5 cut(s) 736, 1380, 1393, 1669, 2130
AcoI YGGCCR 2 cut(s) 738, 2104
AcsI RAATTY 9 cut(s) 743, 790, 1132, 1291, 1432, 1893, 2554, 2797, 2806
AcuI CTGAAG 3 cut(s) 140, 3297, 3392
AcvI CACGTG 2 cut(s) 1423, 1601
AfaI GTAC 4 cut(s) 990, 1963, 3302, 3319
AhdI GACNNNNNGTC 1 cut(s) 974
Alw21I GWGCWC 3 cut(s) 966, 1301, 2341
Alw26I GTCTC 6 cut(s) 208, 235, 290, 2161, 2707, 3320
AlwI GGATC 5 cut(s) 736, 1380, 1393, 1669, 2130
AlwNI CAGNNNCTG 1 cut(s) 1288
Ama87I CYCGRG 3 cut(s) 113, 532, 3065
AoxI GGCC 8 cut(s) 13, 162, 738, 1171, 1741, 2104, 3267, 3341
ApaI GGGCCC 1 cut(s) 166
ApeKI GCWGC 6 cut(s) 171, 418, 1279, 2264, 3001, 3127
ApoI RAATTY 9 cut(s) 743, 790, 1132, 1291, 1432, 1893, 2554, 2797, 2806
Asp700I GAANNNNTTC 3 cut(s) 373, 1235, 1652
AspLEI GCGC 1 cut(s) 2269
AspS9I GGNCC 7 cut(s) 136, 162, 163, 947, 1574, 3160, 3272
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 8 cut(s) 173, 369, 452, 899, 1228, 2045, 2295, 2722
AsuII TTCGAA 2 cut(s) 605, 860
AsuNHI GCTAGC 1 cut(s) 1973
AvaI CYCGRG 3 cut(s) 113, 532, 3065
AvaII GGWCC 5 cut(s) 136, 947, 1574, 3160, 3272
BaeGI GKGCMC 5 cut(s) 166, 1153, 1418, 1428, 2518
BamHI GGATCC 1 cut(s) 1385
BanI GGYRCC 2 cut(s) 1150, 2515
BanII GRGCYC 3 cut(s) 166, 966, 1301
BarI GAAGNNNNNNTAC 2 cut(s) 2821, 2853
BbrPI CACGTG 2 cut(s) 1423, 1601
BbsI GAAGAC 2 cut(s) 37, 128
Bbv12I GWGCWC 3 cut(s) 966, 1301, 2341
BbvI GCAGC 6 cut(s) 183, 405, 1266, 2251, 2988, 3114
BccI CCATC 7 cut(s) 137, 317, 1397, 1468, 1688, 2345, 3172
BceAI ACGGC 3 cut(s) 184, 406, 2636
BciVI GTATCC 1 cut(s) 2918
BclI TGATCA 1 cut(s) 178
BcnI CCSGG 1 cut(s) 247
BcoDI GTCTC 6 cut(s) 208, 235, 290, 2161, 2707, 3320
BfaI CTAG 6 cut(s) 930, 1530, 1974, 2826, 2997, 3397
BfmI CTRYAG 2 cut(s) 1280, 2209
BfuAI ACCTGC 2 cut(s) 1892, 3394
BfuI GTATCC 1 cut(s) 2918
BglII AGATCT 5 cut(s) 1438, 1775, 1831, 2822, 2831
BisI GCNGC 8 cut(s) 172, 419, 1280, 2107, 2248, 2265, 3002, 3128
BlpI GCTNAGC 3 cut(s) 236, 960, 2280
BlsI GCNGC 8 cut(s) 173, 420, 1281, 2108, 2249, 2266, 3003, 3129
Bme18I GGWCC 5 cut(s) 136, 947, 1574, 3160, 3272
BmeRI GACNNNNNGTC 1 cut(s) 974
BmeT110I CYCGRG 3 cut(s) 113, 532, 3065
BmgT120I GGNCC 7 cut(s) 136, 162, 163, 947, 1574, 3160, 3272
BmrI ACTGGG 1 cut(s) 1331
BmsI GCATC 7 cut(s) 1259, 1783, 2118, 2384, 2399, 2754, 3285
BmtI GCTAGC 1 cut(s) 1977
BmuI ACTGGG 1 cut(s) 1331
BpiI GAAGAC 2 cut(s) 37, 128
BplI GAGNNNNNCTC 4 cut(s) 1976, 2008, 3317, 3349
BpmI CTGGAG 3 cut(s) 1263, 1812, 2604
Bpu10I CCTNAGC 2 cut(s) 941, 3237
Bpu1102I GCTNAGC 3 cut(s) 236, 960, 2280
Bpu14I TTCGAA 2 cut(s) 605, 860
BpuEI CTTGAG 4 cut(s) 512, 788, 1888, 1910
BpuMI CCSGG 1 cut(s) 247
BsaAI YACGTR 2 cut(s) 1423, 1601
BsaI GGTCTC 2 cut(s) 208, 3320
BsaWI WCCGGW 1 cut(s) 592
BsaXI ACNNNNNCTCC 6 cut(s) 334, 337, 364, 367, 500, 530
Bse1I ACTGG 9 cut(s) 1246, 1337, 1576, 1663, 1879, 1963, 2565, 2751, 3037
BseGI GGATG 8 cut(s) 928, 1081, 1389, 1798, 1846, 2109, 2356, 2375
BseNI ACTGG 9 cut(s) 1246, 1337, 1576, 1663, 1879, 1963, 2565, 2751, 3037
BseRI GAGGAG 3 cut(s) 355, 358, 361
BseSI GKGCMC 5 cut(s) 166, 1153, 1418, 1428, 2518
BseXI GCAGC 6 cut(s) 183, 405, 1266, 2251, 2988, 3114
BseYI CCCAGC 1 cut(s) 3004
Bsh1236I CGCG 1 cut(s) 2914
BshFI GGCC 8 cut(s) 15, 164, 740, 1173, 1743, 2106, 3269, 3343
BshNI GGYRCC 2 cut(s) 1150, 2515
BsiHKAI GWGCWC 3 cut(s) 966, 1301, 2341
BsiHKCI CYCGRG 3 cut(s) 113, 532, 3065
BsiSI CCGG 5 cut(s) 75, 246, 593, 737, 3270
BslFI GGGAC 1 cut(s) 838
BsmAI GTCTC 6 cut(s) 208, 235, 290, 2161, 2707, 3320
BsmFI GGGAC 1 cut(s) 838
BsmI GAATGC 3 cut(s) 879, 1039, 2974
BsnI GGCC 8 cut(s) 15, 164, 740, 1173, 1743, 2106, 3269, 3343
Bso31I GGTCTC 2 cut(s) 208, 3320
BsoBI CYCGRG 3 cut(s) 113, 532, 3065
Bsp119I TTCGAA 2 cut(s) 605, 860
Bsp120I GGGCCC 1 cut(s) 162
Bsp1286I GDGCHC 8 cut(s) 166, 966, 1153, 1301, 1418, 1428, 2341, 2518
Bsp1720I GCTNAGC 3 cut(s) 236, 960, 2280
BspANI GGCC 8 cut(s) 15, 164, 740, 1173, 1743, 2106, 3269, 3343
BspFNI CGCG 1 cut(s) 2914
BspMAI CTGCAG 1 cut(s) 1284
BspMI ACCTGC 2 cut(s) 1892, 3394
BspOI GCTAGC 1 cut(s) 1977
BspPI GGATC 5 cut(s) 736, 1380, 1393, 1669, 2130
BspT104I TTCGAA 2 cut(s) 605, 860
BspT107I GGYRCC 2 cut(s) 1150, 2515
BspTNI GGTCTC 2 cut(s) 208, 3320
BsrI ACTGG 9 cut(s) 1246, 1337, 1576, 1663, 1879, 1963, 2565, 2751, 3037
BssT1I CCWWGG 5 cut(s) 222, 450, 1154, 1938, 2221
Bst6I CTCTTC 2 cut(s) 2417, 2435
BstAPI GCANNNNNTGC 2 cut(s) 1637, 1770
BstBAI YACGTR 2 cut(s) 1423, 1601
BstBI TTCGAA 2 cut(s) 605, 860
BstC8I GCNNGC 6 cut(s) 1175, 1975, 2649, 3024, 3211, 3215
BstDSI CCRYGG 1 cut(s) 166
BstEII GGTNACC 1 cut(s) 2741
BstF5I GGATG 8 cut(s) 928, 1081, 1389, 1798, 1846, 2109, 2356, 2375
BstFNI CGCG 1 cut(s) 2914
BstHHI GCGC 1 cut(s) 2269
BstMAI GTCTC 6 cut(s) 208, 235, 290, 2161, 2707, 3320
BstMWI GCNNNNNNNGC 3 cut(s) 1157, 1637, 1770
BstNSI RCATGY 2 cut(s) 3026, 3217
BstPI GGTNACC 1 cut(s) 2741
BstSFI CTRYAG 2 cut(s) 1280, 2209
BstSLI GKGCMC 5 cut(s) 166, 1153, 1418, 1428, 2518
BstUI CGCG 1 cut(s) 2914
BstV1I GCAGC 6 cut(s) 183, 405, 1266, 2251, 2988, 3114
BstV2I GAAGAC 2 cut(s) 37, 128
BstX2I RGATCY 8 cut(s) 728, 1385, 1438, 1775, 1831, 2135, 2822, 2831
BstYI RGATCY 8 cut(s) 728, 1385, 1438, 1775, 1831, 2135, 2822, 2831
BsuI GTATCC 1 cut(s) 2918
BsuRI GGCC 8 cut(s) 15, 164, 740, 1173, 1743, 2106, 3269, 3343
BtgI CCRYGG 1 cut(s) 166
BtsCI GGATG 8 cut(s) 928, 1081, 1389, 1798, 1846, 2109, 2356, 2375
BtsI GCAGTG 1 cut(s) 1416
BtsIMutI CAGTG 9 cut(s) 184, 845, 1239, 1366, 1372, 1416, 1569, 1656, 2758
BveI ACCTGC 2 cut(s) 1892, 3394
Cac8I GCNNGC 6 cut(s) 1175, 1975, 2649, 3024, 3211, 3215
CaiI CAGNNNCTG 1 cut(s) 1288
CfoI GCGC 1 cut(s) 2269
Cfr13I GGNCC 7 cut(s) 136, 162, 163, 947, 1574, 3160, 3272
CsiI ACCWGGT 2 cut(s) 2308, 2724
Csp6I GTAC 4 cut(s) 989, 1962, 3301, 3318
CspCI CAANNNNNGTGG 2 cut(s) 1174, 1209
CviQI GTAC 4 cut(s) 989, 1962, 3301, 3318
DrdI GACNNNNNNGTC 1 cut(s) 130
DriI GACNNNNNGTC 1 cut(s) 974
DseDI GACNNNNNNGTC 1 cut(s) 130
EaeI YGGCCR 2 cut(s) 738, 2104
Eam1104I CTCTTC 2 cut(s) 2417, 2435
Eam1105I GACNNNNNGTC 1 cut(s) 974
EarI CTCTTC 2 cut(s) 2417, 2435
EciI GGCGGA 1 cut(s) 801
Ecl136II GAGCTC 2 cut(s) 964, 1299
Eco130I CCWWGG 5 cut(s) 222, 450, 1154, 1938, 2221
Eco147I AGGCCT 1 cut(s) 3343
Eco24I GRGCYC 3 cut(s) 166, 966, 1301
Eco31I GGTCTC 2 cut(s) 208, 3320
Eco32I GATATC 1 cut(s) 2038
Eco47I GGWCC 5 cut(s) 136, 947, 1574, 3160, 3272
Eco53kI GAGCTC 2 cut(s) 964, 1299
Eco57I CTGAAG 3 cut(s) 140, 3297, 3392
Eco72I CACGTG 2 cut(s) 1423, 1601
Eco88I CYCGRG 3 cut(s) 113, 532, 3065
Eco91I GGTNACC 1 cut(s) 2741
EcoICRI GAGCTC 2 cut(s) 964, 1299
EcoO65I GGTNACC 1 cut(s) 2741
EcoRV GATATC 1 cut(s) 2038
EcoT14I CCWWGG 5 cut(s) 222, 450, 1154, 1938, 2221
EcoT22I ATGCAT 1 cut(s) 1633
EcoT38I GRGCYC 3 cut(s) 166, 966, 1301
ErhI CCWWGG 5 cut(s) 222, 450, 1154, 1938, 2221
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FaqI GGGAC 1 cut(s) 838
FauI CCCGC 4 cut(s) 964, 1906, 2049, 2919
FbaI TGATCA 1 cut(s) 178
FblI GTMKAC 1 cut(s) 2144
Fnu4HI GCNGC 8 cut(s) 172, 419, 1280, 2107, 2248, 2265, 3002, 3128
FokI GGATG 8 cut(s) 935, 1088, 1376, 1805, 1853, 2096, 2362, 2363
FriOI GRGCYC 3 cut(s) 166, 966, 1301
Fsp4HI GCNGC 8 cut(s) 172, 419, 1280, 2107, 2248, 2265, 3002, 3128
FspBI CTAG 6 cut(s) 930, 1530, 1974, 2826, 2997, 3397
GlaI GCGC 1 cut(s) 2268
GluI GCNGC 8 cut(s) 172, 419, 1280, 2107, 2248, 2265, 3002, 3128
GsaI CCCAGC 1 cut(s) 3008
GsuI CTGGAG 3 cut(s) 1263, 1812, 2604
HaeIII GGCC 8 cut(s) 15, 164, 740, 1173, 1743, 2106, 3269, 3343
HapII CCGG 5 cut(s) 75, 246, 593, 737, 3270
HhaI GCGC 1 cut(s) 2269
Hin6I GCGC 1 cut(s) 2267
HinP1I GCGC 1 cut(s) 2267
HindIII AAGCTT 4 cut(s) 279, 371, 1123, 1319
HpaII CCGG 5 cut(s) 75, 246, 593, 737, 3270
HphI GGTGA 8 cut(s) 173, 369, 452, 899, 1228, 2045, 2295, 2722
Hpy166II GTNNAC 6 cut(s) 156, 890, 1219, 1656, 2145, 3109
Hpy8I GTNNAC 6 cut(s) 156, 890, 1219, 1656, 2145, 3109
HpyAV CCTTC 8 cut(s) 1091, 1163, 1598, 2124, 2652, 2700, 3091, 3248
HpyCH4IV ACGT 4 cut(s) 1422, 1600, 2525, 3243
HpyF10VI GCNNNNNNNGC 3 cut(s) 1157, 1637, 1770
HpySE526I ACGT 4 cut(s) 1422, 1600, 2525, 3243
HspAI GCGC 1 cut(s) 2267
Ksp22I TGATCA 1 cut(s) 178
LmnI GCTCC 4 cut(s) 656, 1106, 1997, 2344
Lsp1109I GCAGC 6 cut(s) 183, 405, 1266, 2251, 2988, 3114
LweI GCATC 7 cut(s) 1259, 1783, 2118, 2384, 2399, 2754, 3285
MabI ACCWGGT 2 cut(s) 2308, 2724
MaeI CTAG 6 cut(s) 930, 1530, 1974, 2826, 2997, 3397
MaeII ACGT 4 cut(s) 1422, 1600, 2525, 3243
MaeIII GTNAC 8 cut(s) 269, 837, 1559, 1986, 2567, 2728, 2741, 3113
MfeI CAATTG 2 cut(s) 1186, 2364
MflI RGATCY 8 cut(s) 728, 1385, 1438, 1775, 1831, 2135, 2822, 2831
MhlI GDGCHC 8 cut(s) 166, 966, 1153, 1301, 1418, 1428, 2341, 2518
MlyI GAGTC 3 cut(s) 206, 1458, 1779
MmeI TCCRAC 5 cut(s) 75, 114, 486, 1606, 2635
Mph1103I ATGCAT 1 cut(s) 1633
MroXI GAANNNNTTC 3 cut(s) 373, 1235, 1652
MslI CAYNNNNRTG 5 cut(s) 665, 777, 2751, 2928, 3183
MspA1I CMGCKG 3 cut(s) 90, 959, 2396
MspI CCGG 5 cut(s) 75, 246, 593, 737, 3270
MunI CAATTG 2 cut(s) 1186, 2364
Mva1269I GAATGC 3 cut(s) 879, 1039, 2974
MvnI CGCG 1 cut(s) 2914
MwoI GCNNNNNNNGC 3 cut(s) 1157, 1637, 1770
NciI CCSGG 1 cut(s) 247
NheI GCTAGC 1 cut(s) 1973
NmeAIII GCCGAG 1 cut(s) 546
NsiI ATGCAT 1 cut(s) 1633
NspI RCATGY 2 cut(s) 3026, 3217
NspV TTCGAA 2 cut(s) 605, 860
PaeI GCATGC 2 cut(s) 3026, 3217
PaeR7I CTCGAG 1 cut(s) 113
PceI AGGCCT 1 cut(s) 3343
PctI GAATGC 3 cut(s) 879, 1039, 2974
PdmI GAANNNNTTC 3 cut(s) 373, 1235, 1652
PflMI CCANNNNNTGG 2 cut(s) 1523, 1835
PfoI TCCNGGA 2 cut(s) 2341, 2620
PkrI GCNGC 8 cut(s) 173, 420, 1281, 2108, 2249, 2266, 3003, 3129
PleI GAGTC 3 cut(s) 206, 1457, 1779
PmaCI CACGTG 2 cut(s) 1423, 1601
PmlI CACGTG 2 cut(s) 1423, 1601
PpsI GAGTC 3 cut(s) 206, 1457, 1779
Ppu21I YACGTR 2 cut(s) 1423, 1601
Psp124BI GAGCTC 2 cut(s) 966, 1301
PspCI CACGTG 2 cut(s) 1423, 1601
PspEI GGTNACC 1 cut(s) 2741
PspFI CCCAGC 1 cut(s) 3004
PspOMI GGGCCC 1 cut(s) 162
PspPI GGNCC 7 cut(s) 136, 162, 163, 947, 1574, 3160, 3272
PspXI VCTCGAGB 1 cut(s) 113
PstI CTGCAG 1 cut(s) 1284
PstNI CAGNNNCTG 1 cut(s) 1288
PsuI RGATCY 8 cut(s) 728, 1385, 1438, 1775, 1831, 2135, 2822, 2831
PvuII CAGCTG 1 cut(s) 2396
RsaI GTAC 4 cut(s) 990, 1963, 3302, 3319
RsaNI GTAC 4 cut(s) 989, 1962, 3301, 3318
RseI CAYNNNNRTG 5 cut(s) 665, 777, 2751, 2928, 3183
SacI GAGCTC 2 cut(s) 966, 1301
SatI GCNGC 8 cut(s) 172, 419, 1280, 2107, 2248, 2265, 3002, 3128
Sau96I GGNCC 7 cut(s) 136, 162, 163, 947, 1574, 3160, 3272
SchI GAGTC 3 cut(s) 206, 1458, 1779
SduI GDGCHC 8 cut(s) 166, 966, 1153, 1301, 1418, 1428, 2341, 2518
SexAI ACCWGGT 2 cut(s) 2308, 2724
SfaNI GCATC 7 cut(s) 1259, 1783, 2118, 2384, 2399, 2754, 3285
SfcI CTRYAG 2 cut(s) 1280, 2209
Sfr274I CTCGAG 1 cut(s) 113
SfuI TTCGAA 2 cut(s) 605, 860
SinI GGWCC 5 cut(s) 136, 947, 1574, 3160, 3272
SlaI CTCGAG 1 cut(s) 113
SmiMI CAYNNNNRTG 5 cut(s) 665, 777, 2751, 2928, 3183
SmlI CTYRAG 5 cut(s) 113, 491, 767, 1867, 1925
SmoI CTYRAG 5 cut(s) 113, 491, 767, 1867, 1925
SphI GCATGC 2 cut(s) 3026, 3217
SseBI AGGCCT 1 cut(s) 3343
SspI AATATT 1 cut(s) 2536
SspMI CTAG 6 cut(s) 930, 1530, 1974, 2826, 2997, 3397
SstI GAGCTC 2 cut(s) 966, 1301
StuI AGGCCT 1 cut(s) 3343
StyI CCWWGG 5 cut(s) 222, 450, 1154, 1938, 2221
TaiI ACGT 4 cut(s) 1425, 1603, 2528, 3246
TaqI TCGA 7 cut(s) 114, 215, 321, 605, 860, 1001, 1167
TatI WGTACW 2 cut(s) 3300, 3317
TauI GCSGC 2 cut(s) 2109, 2250
TscAI CASTG 9 cut(s) 191, 852, 1246, 1366, 1372, 1416, 1576, 1663, 2758
TseI GCWGC 6 cut(s) 171, 418, 1279, 2264, 3001, 3127
TspDTI ATGAA 8 cut(s) 444, 660, 1038, 1110, 2169, 2219, 3238, 3365
TspGWI ACGGA 3 cut(s) 856, 1005, 2519
TspRI CASTG 9 cut(s) 191, 852, 1246, 1366, 1372, 1416, 1576, 1663, 2758
Van91I CCANNNNNTGG 2 cut(s) 1523, 1835
VpaK11BI GGWCC 5 cut(s) 136, 947, 1574, 3160, 3272
XapI RAATTY 9 cut(s) 743, 790, 1132, 1291, 1432, 1893, 2554, 2797, 2806
XbaI TCTAGA 2 cut(s) 929, 2825
XceI RCATGY 2 cut(s) 3026, 3217
XhoI CTCGAG 1 cut(s) 113
XmiI GTMKAC 1 cut(s) 2144
XmnI GAANNNNTTC 3 cut(s) 373, 1235, 1652
XspI CTAG 6 cut(s) 930, 1530, 1974, 2826, 2997, 3397
Zsp2I ATGCAT 1 cut(s) 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.