RchiOBHm_Chr5g0004831

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0006391
Physical Location & Seq
Forward (+)
3190712 .. 3193738
3027 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28606

Sequence Viewer

Length: 1329 bp
ATGGCAGAGGAGTATCAGGGCGGGATTTGCGGTGGCAACTGGTGGAGCAGTGCATCGAGACATGCGCTCGTGGCGACGTCGCCGTGTTCTGTAGGTTTCAATGATCATATGGGAAGCTTTGGCTGCCCGAACGACGTGGACATGATCAAGTCAAGGTCTACTTGCGGCGGTTTTGGTCTTAATTCATCGTCTTCCACACTGCCCTCAGATTTGAACCAAGCGTTGCTCCTTCGCGGTAGTAGTGGAAGAGGTGAGAGCAATTTTCATAATTCCATGCTCCAAGAAGACATGGGTTCTTTCAAGCAGCCTATGAATAATCAAGATTTTCCATTAGACCAAAGCAGCTCCTCCTCTGGGTTTCCTATAACCTCATCGCCAGCTAATAATTCTTACGGTGGGGGCTTCCCTTCACAATTGTTGCAAAGTTTGTATGATCCGGAAGAAGTAGTTGTACCCCAACCACAGCTACAATCACTATTCAACAACGGCTCGTCATCCATGAGTTATTCTTCAGCTGAAAGTTATGGCACACTTGGTTCCAATGATTTATTATCATCACCAACTTCTAGTACTACCTGTTGGCCTAGATACTCTCCCAGCTGCCTAAGACCTTCCCTGCAGCCAAGGCAACAACAACAACAACAACAACCCAGAGGCGGCAGTGGCAGTGGCGGTGGCGGTGGATTGCACTTTTCGAATATTAATACACCCTTCTGGAATGCTCCCGCGGCCGCTTTAAACCATGACATCCGATCAACTGGTCTTTTTCCCTCATTGTCACAGTCACAATATACAGCACCTACTGCAGCAATATATGATGAACATAAACCCATTACTTCCGGTAACTTCACTAAGCCCACTACTACTGAAGATGTTCAGGACTCGAGCTCCAGTACAGTCAAGAAGAGCGGCAGCAGCTTCTGTAGTAGTACTGAACCCGTATTCAAAAGAGCTCGGATTGAAACACCTTCACCATTACCGACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGGATCACAGCTCTCCAGCAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCTTCTGTCCTCCACGAAGCTATTGAGTACATCAAATTCCTCCACGATCAAGTCGGTGTTTTAAGCACTCCATATATGAAAAATGGAGCTCCCATGCAACACCAACAGGGTTGTGATAAATTGAAGGAGGCAGAACAAGAAGGAAAGCACGATCTAAAAAGTCGAGGGTTGTGCTTGGTTCCAATTTCAAGTACATTCCCTGTTGCTAATGAGACCACGGCTGACTTTTGGACTCCGACATTTGGAGCAACGTCTTTCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000820 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000987 GO:0001012 GO:0001067 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006521 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031668 GO:0032774 GO:0032870 GO:0033238 GO:0033554 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0097306 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2000214 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

442

Amino Acids

47.5

Weight (kDa)

6.07

Isoelectric Point (pI)

66.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 80
AccB7I CCANNNNNTGG 1 cut(s) 1036
AccBSI CCGCTC 1 cut(s) 909
AccI GTMKAC 1 cut(s) 158
AccII CGCG 2 cut(s) 234, 728
AccIII TCCGGA 1 cut(s) 436
AclWI GGATC 2 cut(s) 428, 1025
AcoI YGGCCR 1 cut(s) 729
AcsI RAATTY 1 cut(s) 1100
AcuI CTGAAG 2 cut(s) 495, 888
AcyI GRCGYC 1 cut(s) 77
AfaI GTAC 6 cut(s) 453, 571, 895, 931, 1094, 1258
AfiI CCNNNNNNNGG 4 cut(s) 354, 656, 1036, 1307
AgsI TTSAA 8 cut(s) 100, 214, 301, 481, 946, 962, 1189, 1254
AjiI CACGTC 1 cut(s) 136
Alw21I GWGCWC 3 cut(s) 890, 955, 1156
Alw26I GTCTC 2 cut(s) 52, 1271
AlwI GGATC 2 cut(s) 428, 1025
AlwNI CAGNNNCTG 2 cut(s) 921, 1070
Ama87I CYCGRG 1 cut(s) 883
Aor13HI TCCGGA 1 cut(s) 436
AoxI GGCC 2 cut(s) 581, 729
ApeKI GCWGC 8 cut(s) 123, 304, 342, 600, 619, 806, 912, 915
ApoI RAATTY 1 cut(s) 1100
AseI ATTAAT 1 cut(s) 702
Asp700I GAANNNNTTC 1 cut(s) 873
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 1 cut(s) 1012
AsuHPI GGTGA 3 cut(s) 263, 549, 963
AsuII TTCGAA 1 cut(s) 695
AvaI CYCGRG 1 cut(s) 883
AvaII GGWCC 1 cut(s) 1012
BanII GRGCYC 3 cut(s) 890, 955, 1156
BarI GAAGNNNNNNTAC 2 cut(s) 435, 467
BauI CACGAG 1 cut(s) 68
BbsI GAAGAC 2 cut(s) 183, 291
Bbv12I GWGCWC 3 cut(s) 890, 955, 1156
BbvI GCAGC 8 cut(s) 110, 316, 354, 587, 631, 818, 924, 927
BceAI ACGGC 3 cut(s) 67, 502, 1299
BcgI CGANNNNNNTGC 2 cut(s) 1218, 1252
BclI TGATCA 2 cut(s) 103, 144
BcoDI GTCTC 2 cut(s) 52, 1271
BfaI CTAG 3 cut(s) 567, 585, 1007
BfmI CTRYAG 4 cut(s) 90, 617, 804, 922
BmcAI AGTACT 2 cut(s) 571, 931
Bme18I GGWCC 1 cut(s) 1012
BmeT110I CYCGRG 1 cut(s) 883
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 1012
BmiI GGNNCC 3 cut(s) 538, 1013, 1245
BmsI GCATC 1 cut(s) 62
BpiI GAAGAC 2 cut(s) 183, 291
BpmI CTGGAG 2 cut(s) 874, 1013
Bpu14I TTCGAA 1 cut(s) 695
BsaHI GRCGYC 1 cut(s) 77
BsaI GGTCTC 1 cut(s) 1271
BsaJI CCNNGG 3 cut(s) 623, 726, 1281
BsaWI WCCGGW 3 cut(s) 436, 839, 1014
BsaXI ACNNNNNCTCC 2 cut(s) 872, 902
Bsc4I CCNNNNNNNGG 4 cut(s) 354, 656, 1036, 1307
Bse1I ACTGG 3 cut(s) 44, 763, 891
BseAI TCCGGA 1 cut(s) 436
BseDI CCNNGG 3 cut(s) 623, 726, 1281
BseGI GGATG 2 cut(s) 494, 747
BseLI CCNNNNNNNGG 4 cut(s) 354, 656, 1036, 1307
BseMII CTCAG 1 cut(s) 219
BseNI ACTGG 3 cut(s) 44, 763, 891
BseRI GAGGAG 3 cut(s) 23, 337, 340
BseX3I CGGCCG 1 cut(s) 729
BseXI GCAGC 8 cut(s) 110, 316, 354, 587, 631, 818, 924, 927
BseYI CCCAGC 1 cut(s) 596
Bsh1236I CGCG 2 cut(s) 234, 728
Bsh1285I CGRYCG 1 cut(s) 732
BshFI GGCC 2 cut(s) 583, 731
BsiEI CGRYCG 1 cut(s) 732
BsiHKAI GWGCWC 3 cut(s) 890, 955, 1156
BsiHKCI CYCGRG 1 cut(s) 883
BsiSI CCGG 3 cut(s) 437, 840, 1015
BslFI GGGAC 1 cut(s) 1025
BslI CCNNNNNNNGG 4 cut(s) 354, 656, 1036, 1307
BsmAI GTCTC 2 cut(s) 52, 1271
BsmFI GGGAC 1 cut(s) 1025
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 2 cut(s) 583, 731
Bso31I GGTCTC 1 cut(s) 1271
BsoBI CYCGRG 1 cut(s) 883
Bsp119I TTCGAA 1 cut(s) 695
Bsp1286I GDGCHC 3 cut(s) 890, 955, 1156
Bsp13I TCCGGA 1 cut(s) 436
Bsp143I GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
BspANI GGCC 2 cut(s) 583, 731
BspCNI CTCAG 1 cut(s) 218
BspEI TCCGGA 1 cut(s) 436
BspFNI CGCG 2 cut(s) 234, 728
BspLI GGNNCC 3 cut(s) 538, 1013, 1245
BspMAI CTGCAG 2 cut(s) 621, 808
BspPI GGATC 2 cut(s) 428, 1025
BspQI GCTCTTC 1 cut(s) 899
BspT104I TTCGAA 1 cut(s) 695
BspTNI GGTCTC 1 cut(s) 1271
BsrBI CCGCTC 1 cut(s) 909
BsrI ACTGG 3 cut(s) 44, 763, 891
BssECI CCNNGG 3 cut(s) 623, 726, 1281
BssMI GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
BssNI GRCGYC 1 cut(s) 77
BssSI CACGAG 1 cut(s) 68
BssT1I CCWWGG 1 cut(s) 623
Bst2BI CACGAG 1 cut(s) 68
Bst4CI ACNGT 3 cut(s) 395, 783, 898
Bst6I CTCTTC 2 cut(s) 241, 899
BstACI GRCGYC 1 cut(s) 77
BstAPI GCANNNNNTGC 1 cut(s) 803
BstBI TTCGAA 1 cut(s) 695
BstC8I GCNNGC 1 cut(s) 378
BstDEI CTNAG 3 cut(s) 205, 605, 852
BstDSI CCRYGG 2 cut(s) 726, 1281
BstF5I GGATG 2 cut(s) 494, 747
BstFNI CGCG 2 cut(s) 234, 728
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 7 cut(s) 106, 147, 436, 755, 1020, 1114, 1219
BstMAI GTCTC 2 cut(s) 52, 1271
BstMBI GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
BstMCI CGRYCG 1 cut(s) 732
BstMWI GCNNNNNNNGC 8 cut(s) 27, 71, 123, 625, 663, 728, 803, 915
BstNSI RCATGY 1 cut(s) 65
BstSFI CTRYAG 4 cut(s) 90, 617, 804, 922
BstUI CGCG 2 cut(s) 234, 728
BstV1I GCAGC 8 cut(s) 110, 316, 354, 587, 631, 818, 924, 927
BstV2I GAAGAC 2 cut(s) 183, 291
BstZI CGGCCG 1 cut(s) 729
BsuRI GGCC 2 cut(s) 583, 731
BtgI CCRYGG 2 cut(s) 726, 1281
BtgZI GCGATG 1 cut(s) 357
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 2 cut(s) 494, 747
BtsI GCAGTG 4 cut(s) 55, 197, 667, 673
BtsIMutI CAGTG 4 cut(s) 55, 197, 667, 673
Cac8I GCNNGC 1 cut(s) 378
CaiI CAGNNNCTG 2 cut(s) 921, 1070
CciNI GCGGCCGC 1 cut(s) 729
CfoI GCGC 1 cut(s) 67
Cfr13I GGNCC 1 cut(s) 1012
Cfr42I CCGCGG 1 cut(s) 729
Csp6I GTAC 6 cut(s) 452, 570, 894, 930, 1093, 1257
CviAII CATG 7 cut(s) 62, 142, 274, 289, 499, 743, 1159
CviQI GTAC 6 cut(s) 452, 570, 894, 930, 1093, 1257
DdeI CTNAG 3 cut(s) 205, 605, 852
DpnI GATC 7 cut(s) 105, 146, 435, 754, 1019, 1113, 1218
DpnII GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
DraI TTTAAA 1 cut(s) 738
EaeI YGGCCR 1 cut(s) 729
EagI CGGCCG 1 cut(s) 729
Eam1104I CTCTTC 2 cut(s) 241, 899
EarI CTCTTC 2 cut(s) 241, 899
Ecl136II GAGCTC 3 cut(s) 888, 953, 1154
EclXI CGGCCG 1 cut(s) 729
Eco130I CCWWGG 1 cut(s) 623
Eco24I GRGCYC 3 cut(s) 890, 955, 1156
Eco31I GGTCTC 1 cut(s) 1271
Eco47I GGWCC 1 cut(s) 1012
Eco52I CGGCCG 1 cut(s) 729
Eco53kI GAGCTC 3 cut(s) 888, 953, 1154
Eco57I CTGAAG 2 cut(s) 495, 888
Eco88I CYCGRG 1 cut(s) 883
EcoICRI GAGCTC 3 cut(s) 888, 953, 1154
EcoT14I CCWWGG 1 cut(s) 623
EcoT38I GRGCYC 3 cut(s) 890, 955, 1156
ErhI CCWWGG 1 cut(s) 623
FaeI CATG 7 cut(s) 65, 145, 277, 292, 502, 746, 1162
FalI AAGNNNNNCTT 2 cut(s) 145, 177
FaqI GGGAC 1 cut(s) 1025
FatI CATG 7 cut(s) 61, 141, 273, 288, 498, 742, 1158
FauI CCCGC 2 cut(s) 14, 733
FauNDI CATATG 1 cut(s) 108
FbaI TGATCA 2 cut(s) 103, 144
FblI GTMKAC 1 cut(s) 158
FokI GGATG 2 cut(s) 481, 734
FriOI GRGCYC 3 cut(s) 890, 955, 1156
FspBI CTAG 3 cut(s) 567, 585, 1007
GlaI GCGC 1 cut(s) 66
GsaI CCCAGC 1 cut(s) 600
GsuI CTGGAG 2 cut(s) 874, 1013
HaeIII GGCC 2 cut(s) 583, 731
HapII CCGG 3 cut(s) 437, 840, 1015
HhaI GCGC 1 cut(s) 67
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 7 cut(s) 65, 145, 277, 292, 502, 746, 1162
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HindIII AAGCTT 1 cut(s) 115
HinfI GANTC 2 cut(s) 881, 1297
HpaII CCGG 3 cut(s) 437, 840, 1015
HphI GGTGA 3 cut(s) 263, 549, 963
Hpy166II GTNNAC 2 cut(s) 139, 159
Hpy188I TCNGA 6 cut(s) 208, 752, 957, 996, 1052, 1302
Hpy188III TCNNGA 6 cut(s) 57, 320, 437, 715, 878, 901
Hpy8I GTNNAC 2 cut(s) 139, 159
Hpy99I CGWCG 3 cut(s) 79, 82, 137
HpyAV CCTTC 7 cut(s) 239, 417, 621, 721, 978, 1183, 1199
HpyCH4III ACNGT 3 cut(s) 395, 783, 898
HpyCH4IV ACGT 3 cut(s) 77, 135, 1316
HpyCH4V TGCA 6 cut(s) 53, 421, 619, 688, 806, 1162
HpyF10VI GCNNNNNNNGC 8 cut(s) 27, 71, 123, 625, 663, 728, 803, 915
HpyF3I CTNAG 3 cut(s) 205, 605, 852
HpySE526I ACGT 3 cut(s) 77, 135, 1316
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 7 cut(s) 65, 145, 277, 292, 502, 746, 1162
HspAI GCGC 1 cut(s) 65
Kpn2I TCCGGA 1 cut(s) 436
Ksp22I TGATCA 2 cut(s) 103, 144
KspI CCGCGG 1 cut(s) 729
Kzo9I GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
LguI GCTCTTC 1 cut(s) 899
LmnI GCTCC 9 cut(s) 45, 231, 282, 350, 727, 893, 1151, 1159, 1310
Lsp1109I GCAGC 8 cut(s) 110, 316, 354, 587, 631, 818, 924, 927
LweI GCATC 1 cut(s) 62
MaeI CTAG 3 cut(s) 567, 585, 1007
MaeII ACGT 3 cut(s) 77, 135, 1316
MaeIII GTNAC 3 cut(s) 777, 783, 842
MalI GATC 7 cut(s) 105, 146, 435, 754, 1019, 1113, 1218
MbiI CCGCTC 1 cut(s) 909
MboI GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
MboII GAAGA 7 cut(s) 183, 258, 296, 452, 501, 881, 916
MfeI CAATTG 2 cut(s) 413, 1034
MhlI GDGCHC 3 cut(s) 890, 955, 1156
MluCI AATT 9 cut(s) 181, 259, 268, 385, 413, 1034, 1100, 1184, 1248
MlyI GAGTC 2 cut(s) 875, 1291
MmeI TCCRAC 1 cut(s) 1325
MroI TCCGGA 1 cut(s) 436
MroXI GAANNNNTTC 1 cut(s) 873
MseI TTAA 5 cut(s) 180, 702, 737, 987, 1127
MspA1I CMGCKG 3 cut(s) 515, 600, 728
MspI CCGG 3 cut(s) 437, 840, 1015
MunI CAATTG 2 cut(s) 413, 1034
Mva1269I GAATGC 1 cut(s) 724
MvnI CGCG 2 cut(s) 234, 728
MwoI GCNNNNNNNGC 8 cut(s) 27, 71, 123, 625, 663, 728, 803, 915
NdeI CATATG 1 cut(s) 108
NdeII GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
NlaIII CATG 7 cut(s) 65, 145, 277, 292, 502, 746, 1162
NlaIV GGNNCC 3 cut(s) 538, 1013, 1245
NmuCI GTSAC 2 cut(s) 777, 783
NotI GCGGCCGC 1 cut(s) 729
NspI RCATGY 1 cut(s) 65
NspV TTCGAA 1 cut(s) 695
PaeR7I CTCGAG 1 cut(s) 883
PciSI GCTCTTC 1 cut(s) 899
PcsI WCGNNNNNNNCGW 1 cut(s) 1056
PctI GAATGC 1 cut(s) 724
PdmI GAANNNNTTC 1 cut(s) 873
PflMI CCANNNNNTGG 1 cut(s) 1036
PleI GAGTC 2 cut(s) 875, 1291
PpsI GAGTC 2 cut(s) 875, 1291
PshBI ATTAAT 1 cut(s) 702
Psp124BI GAGCTC 3 cut(s) 890, 955, 1156
PspFI CCCAGC 1 cut(s) 596
PspN4I GGNNCC 3 cut(s) 538, 1013, 1245
PspPI GGNCC 1 cut(s) 1012
PspXI VCTCGAGB 1 cut(s) 883
PstI CTGCAG 2 cut(s) 621, 808
PstNI CAGNNNCTG 2 cut(s) 921, 1070
PvuII CAGCTG 2 cut(s) 515, 600
RsaI GTAC 6 cut(s) 453, 571, 895, 931, 1094, 1258
RsaNI GTAC 6 cut(s) 452, 570, 894, 930, 1093, 1257
SacI GAGCTC 3 cut(s) 890, 955, 1156
SacII CCGCGG 1 cut(s) 729
SapI GCTCTTC 1 cut(s) 899
SaqAI TTAA 5 cut(s) 180, 702, 737, 987, 1127
Sau3AI GATC 7 cut(s) 103, 144, 433, 752, 1017, 1111, 1216
Sau96I GGNCC 1 cut(s) 1012
ScaI AGTACT 2 cut(s) 571, 931
SchI GAGTC 2 cut(s) 875, 1291
SduI GDGCHC 3 cut(s) 890, 955, 1156
SfaNI GCATC 1 cut(s) 62
SfcI CTRYAG 4 cut(s) 90, 617, 804, 922
Sfr274I CTCGAG 1 cut(s) 883
Sfr303I CCGCGG 1 cut(s) 729
SfuI TTCGAA 1 cut(s) 695
SgrBI CCGCGG 1 cut(s) 729
SinI GGWCC 1 cut(s) 1012
SlaI CTCGAG 1 cut(s) 883
SmlI CTYRAG 1 cut(s) 883
SmoI CTYRAG 1 cut(s) 883
Sse9I AATT 9 cut(s) 181, 259, 268, 385, 413, 1034, 1100, 1184, 1248
SspI AATATT 1 cut(s) 700
SspMI CTAG 3 cut(s) 567, 585, 1007
SstI GAGCTC 3 cut(s) 890, 955, 1156
StyI CCWWGG 1 cut(s) 623
TaaI ACNGT 3 cut(s) 395, 783, 898
TaiI ACGT 3 cut(s) 80, 138, 1319
TaqI TCGA 4 cut(s) 56, 695, 884, 1228
TaqII GACCGA 1 cut(s) 1073
TasI AATT 9 cut(s) 181, 259, 268, 385, 413, 1034, 1100, 1184, 1248
TatI WGTACW 5 cut(s) 569, 893, 929, 1092, 1256
TauI GCSGC 5 cut(s) 168, 660, 731, 734, 912
Tru1I TTAA 5 cut(s) 180, 702, 737, 987, 1127
Tru9I TTAA 5 cut(s) 180, 702, 737, 987, 1127
TscAI CASTG 4 cut(s) 55, 204, 667, 673
TseFI GTSAC 2 cut(s) 777, 783
TseI GCWGC 8 cut(s) 123, 304, 342, 600, 619, 806, 912, 915
Tsp45I GTSAC 2 cut(s) 777, 783
TspDTI ATGAA 5 cut(s) 174, 254, 326, 834, 1157
TspRI CASTG 4 cut(s) 55, 204, 667, 673
Van91I CCANNNNNTGG 1 cut(s) 1036
VpaK11BI GGWCC 1 cut(s) 1012
VspI ATTAAT 1 cut(s) 702
XapI RAATTY 1 cut(s) 1100
XceI RCATGY 1 cut(s) 65
XhoI CTCGAG 1 cut(s) 883
XmiI GTMKAC 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 873
XspI CTAG 3 cut(s) 567, 585, 1007
ZraI GACGTC 1 cut(s) 78
ZrmI AGTACT 2 cut(s) 571, 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.