Rh5AG042100

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0006391
Physical Location & Seq
Forward (+)
3183513 .. 3186759
3247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG042100.1

Sequence Viewer

Length: 1188 bp
ATGGCAGAGGAGTATCAGGGCGGGATTTGCGGTGGCAACTGGTGGAGCAGTGCATCGAGACATGCGCTCGTGGCGACGTCGCCGTGTTCTGTAGGTTTCAATGATCATATGGGAAGCTTTGGCTGCCCGAACGACGTGGACATGATCAAGTCAAGGTCTACTTGCGGCGGTGAGATTAATATTAGCTCATCAGATGTAGTCTCGCTTAATATGGATCATGATCAAGATCATGTTCAAAATCCTCATGAGAATACTGATATTTCTGCTACTGATTCAACCTTGCAAATGATAGGTTTTGGTCTTAATTCATCGTCTTCTACACTGCCCTCAGATTTGAACCAAGCGTTACTCCTTCGCAGTAGTAGTGGAAGAGGTGAGAGCAATTTTCATAATTCCATGCTCCAAGAAGAAATGGGTTCTTTCAAGCAGGCTATGAATAATCAAGATTTTCCATTAGACCAAAGCAGCTCCTCCACTGGGTTTCCTATAACCTCATCGCCAGCTAATAATTCTTACGGTGGGGGCTTCCCTTCACAATTGTTGCAAAGTTTGTATGATCCGGAAGAAGTAGTTGTACCCCAACCACAGCTACAATCACTATTCAACAACGGCTCGTCATCCATGAGTTATTCTTCAGCTGAAAGTTATGGCACACTTGGTTCCAATGATTTATTATCATCACCAACTTCTAGTACTACCTGTTGGCCTAGATACTCTCCCAGCTGCCTAAGACCTTCCCTGCAGCCAAGGCAACAACAACAACAACAACAACCCAGAGGCGGCAGTGGCAGTGGCGGTGGCGGTGGATTGCACTTTTCGAATATTAATACACCCTTCTGGAATGCTCCCGCGGCCGCTCTAAACCATGACATCCGATCAACTGGTCTTTTTCCCTCATTGTCACAGTCACAATATACAGCACCTACTGCAGCAATATATGATGAACATAAACCCATTACTTCCGGTAACTTCACTAAGCCCACTACTAATGAAGATGTTCAGGACTCGAGCTCCAGTACAGTCAAGAAGAGCGGCAGCAGCTTCTGTAGTAGTACTGAACCCGTATTCAAAAGAGCTCGGATTGAAACACCTTCACCATTACCGACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGGATCACAGCTCTCCAGCAATTGGTTTCGCCTTTCGGAAAGGTGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000820 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000987 GO:0001012 GO:0001067 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006521 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031668 GO:0032774 GO:0032870 GO:0033238 GO:0033554 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0097306 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2000214 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

395

Amino Acids

42.31

Weight (kDa)

5.33

Isoelectric Point (pI)

73.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 80
AccB7I CCANNNNNTGG 1 cut(s) 1159
AccBSI CCGCTC 2 cut(s) 857, 1032
AccI GTMKAC 1 cut(s) 158
AccII CGCG 1 cut(s) 851
AccIII TCCGGA 1 cut(s) 559
AclWI GGATC 3 cut(s) 222, 551, 1148
AcoI YGGCCR 1 cut(s) 852
AcuI CTGAAG 1 cut(s) 618
AcyI GRCGYC 1 cut(s) 77
AfaI GTAC 4 cut(s) 576, 694, 1018, 1054
AfiI CCNNNNNNNGG 3 cut(s) 477, 779, 1159
AgsI TTSAA 8 cut(s) 100, 236, 276, 337, 424, 604, 1069, 1085
AjiI CACGTC 1 cut(s) 136
Alw21I GWGCWC 2 cut(s) 1013, 1078
Alw26I GTCTC 2 cut(s) 52, 205
AlwI GGATC 3 cut(s) 222, 551, 1148
AlwNI CAGNNNCTG 1 cut(s) 1044
Ama87I CYCGRG 1 cut(s) 1006
Aor13HI TCCGGA 1 cut(s) 559
AoxI GGCC 2 cut(s) 704, 852
ApeKI GCWGC 7 cut(s) 123, 465, 723, 742, 929, 1035, 1038
AseI ATTAAT 2 cut(s) 177, 825
Asp700I GAANNNNTTC 1 cut(s) 996
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 1 cut(s) 1135
AsuHPI GGTGA 4 cut(s) 182, 386, 672, 1086
AsuII TTCGAA 1 cut(s) 818
AvaI CYCGRG 1 cut(s) 1006
AvaII GGWCC 1 cut(s) 1135
BanII GRGCYC 2 cut(s) 1013, 1078
BarI GAAGNNNNNNTAC 2 cut(s) 558, 590
BauI CACGAG 1 cut(s) 68
BbsI GAAGAC 1 cut(s) 306
Bbv12I GWGCWC 2 cut(s) 1013, 1078
BbvI GCAGC 7 cut(s) 110, 477, 710, 754, 941, 1047, 1050
BceAI ACGGC 2 cut(s) 67, 625
BclI TGATCA 3 cut(s) 103, 144, 220
BcoDI GTCTC 2 cut(s) 52, 205
BfaI CTAG 3 cut(s) 690, 708, 1130
BfmI CTRYAG 4 cut(s) 90, 740, 927, 1045
BmcAI AGTACT 2 cut(s) 694, 1054
Bme18I GGWCC 1 cut(s) 1135
BmeT110I CYCGRG 1 cut(s) 1006
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 1135
BmiI GGNNCC 2 cut(s) 661, 1136
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 1 cut(s) 62
BmuI ACTGGG 1 cut(s) 486
BpiI GAAGAC 1 cut(s) 306
BpmI CTGGAG 2 cut(s) 997, 1136
Bpu14I TTCGAA 1 cut(s) 818
BsaBI GATNNNNATC 2 cut(s) 219, 225
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 746, 849
BsaWI WCCGGW 3 cut(s) 559, 962, 1137
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 3 cut(s) 477, 779, 1159
Bse1I ACTGG 4 cut(s) 44, 481, 886, 1014
Bse8I GATNNNNATC 2 cut(s) 219, 225
BseAI TCCGGA 1 cut(s) 559
BseDI CCNNGG 2 cut(s) 746, 849
BseGI GGATG 2 cut(s) 617, 870
BseJI GATNNNNATC 2 cut(s) 219, 225
BseLI CCNNNNNNNGG 3 cut(s) 477, 779, 1159
BseMII CTCAG 1 cut(s) 342
BseNI ACTGG 4 cut(s) 44, 481, 886, 1014
BseRI GAGGAG 2 cut(s) 23, 460
BseX3I CGGCCG 1 cut(s) 852
BseXI GCAGC 7 cut(s) 110, 477, 710, 754, 941, 1047, 1050
BseYI CCCAGC 1 cut(s) 719
Bsh1236I CGCG 1 cut(s) 851
Bsh1285I CGRYCG 1 cut(s) 855
BshFI GGCC 2 cut(s) 706, 854
BsiEI CGRYCG 1 cut(s) 855
BsiHKAI GWGCWC 2 cut(s) 1013, 1078
BsiHKCI CYCGRG 1 cut(s) 1006
BsiSI CCGG 3 cut(s) 560, 963, 1138
BslFI GGGAC 1 cut(s) 1148
BslI CCNNNNNNNGG 3 cut(s) 477, 779, 1159
BsmAI GTCTC 2 cut(s) 52, 205
BsmFI GGGAC 1 cut(s) 1148
BsmI GAATGC 1 cut(s) 847
BsnI GGCC 2 cut(s) 706, 854
BsoBI CYCGRG 1 cut(s) 1006
Bsp119I TTCGAA 1 cut(s) 818
Bsp1286I GDGCHC 2 cut(s) 1013, 1078
Bsp13I TCCGGA 1 cut(s) 559
Bsp143I GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
BspANI GGCC 2 cut(s) 706, 854
BspCNI CTCAG 1 cut(s) 341
BspEI TCCGGA 1 cut(s) 559
BspFNI CGCG 1 cut(s) 851
BspHI TCATGA 2 cut(s) 217, 244
BspLI GGNNCC 2 cut(s) 661, 1136
BspMAI CTGCAG 2 cut(s) 744, 931
BspPI GGATC 3 cut(s) 222, 551, 1148
BspQI GCTCTTC 1 cut(s) 1022
BspT104I TTCGAA 1 cut(s) 818
BsrBI CCGCTC 2 cut(s) 857, 1032
BsrI ACTGG 4 cut(s) 44, 481, 886, 1014
BssECI CCNNGG 2 cut(s) 746, 849
BssMI GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
BssNI GRCGYC 1 cut(s) 77
BssSI CACGAG 1 cut(s) 68
BssT1I CCWWGG 1 cut(s) 746
Bst2BI CACGAG 1 cut(s) 68
Bst4CI ACNGT 3 cut(s) 518, 906, 1021
Bst6I CTCTTC 2 cut(s) 364, 1022
BstACI GRCGYC 1 cut(s) 77
BstAPI GCANNNNNTGC 1 cut(s) 926
BstBI TTCGAA 1 cut(s) 818
BstC8I GCNNGC 2 cut(s) 429, 501
BstDEI CTNAG 3 cut(s) 328, 728, 975
BstDSI CCRYGG 1 cut(s) 849
BstF5I GGATG 2 cut(s) 617, 870
BstFNI CGCG 1 cut(s) 851
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 8 cut(s) 106, 147, 217, 223, 229, 559, 878, 1143
BstMAI GTCTC 2 cut(s) 52, 205
BstMBI GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
BstMCI CGRYCG 1 cut(s) 855
BstMWI GCNNNNNNNGC 8 cut(s) 27, 71, 123, 748, 786, 851, 926, 1038
BstNSI RCATGY 1 cut(s) 65
BstSFI CTRYAG 4 cut(s) 90, 740, 927, 1045
BstUI CGCG 1 cut(s) 851
BstV1I GCAGC 7 cut(s) 110, 477, 710, 754, 941, 1047, 1050
BstV2I GAAGAC 1 cut(s) 306
BstZI CGGCCG 1 cut(s) 852
BsuRI GGCC 2 cut(s) 706, 854
BtgI CCRYGG 1 cut(s) 849
BtgZI GCGATG 1 cut(s) 480
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 2 cut(s) 617, 870
BtsI GCAGTG 4 cut(s) 55, 320, 790, 796
BtsIMutI CAGTG 5 cut(s) 55, 320, 474, 790, 796
Cac8I GCNNGC 2 cut(s) 429, 501
CaiI CAGNNNCTG 1 cut(s) 1044
CciI TCATGA 2 cut(s) 217, 244
CciNI GCGGCCGC 1 cut(s) 852
CfoI GCGC 1 cut(s) 67
Cfr13I GGNCC 1 cut(s) 1135
Cfr42I CCGCGG 1 cut(s) 852
Csp6I GTAC 4 cut(s) 575, 693, 1017, 1053
CviAII CATG 8 cut(s) 62, 142, 218, 230, 245, 397, 622, 866
CviQI GTAC 4 cut(s) 575, 693, 1017, 1053
DdeI CTNAG 3 cut(s) 328, 728, 975
DpnI GATC 8 cut(s) 105, 146, 216, 222, 228, 558, 877, 1142
DpnII GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
EaeI YGGCCR 1 cut(s) 852
EagI CGGCCG 1 cut(s) 852
Eam1104I CTCTTC 2 cut(s) 364, 1022
EarI CTCTTC 2 cut(s) 364, 1022
Ecl136II GAGCTC 2 cut(s) 1011, 1076
EclXI CGGCCG 1 cut(s) 852
Eco130I CCWWGG 1 cut(s) 746
Eco24I GRGCYC 2 cut(s) 1013, 1078
Eco47I GGWCC 1 cut(s) 1135
Eco52I CGGCCG 1 cut(s) 852
Eco53kI GAGCTC 2 cut(s) 1011, 1076
Eco57I CTGAAG 1 cut(s) 618
Eco88I CYCGRG 1 cut(s) 1006
EcoICRI GAGCTC 2 cut(s) 1011, 1076
EcoT14I CCWWGG 1 cut(s) 746
EcoT38I GRGCYC 2 cut(s) 1013, 1078
ErhI CCWWGG 1 cut(s) 746
FaeI CATG 8 cut(s) 65, 145, 221, 233, 248, 400, 625, 869
FalI AAGNNNNNCTT 2 cut(s) 145, 177
FaqI GGGAC 1 cut(s) 1148
FatI CATG 8 cut(s) 61, 141, 217, 229, 244, 396, 621, 865
FauI CCCGC 2 cut(s) 14, 856
FauNDI CATATG 1 cut(s) 108
FbaI TGATCA 3 cut(s) 103, 144, 220
FblI GTMKAC 1 cut(s) 158
FokI GGATG 2 cut(s) 604, 857
FriOI GRGCYC 2 cut(s) 1013, 1078
FspBI CTAG 3 cut(s) 690, 708, 1130
GlaI GCGC 1 cut(s) 66
GsaI CCCAGC 1 cut(s) 723
GsuI CTGGAG 2 cut(s) 997, 1136
HaeIII GGCC 2 cut(s) 706, 854
HapII CCGG 3 cut(s) 560, 963, 1138
HhaI GCGC 1 cut(s) 67
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 8 cut(s) 65, 145, 221, 233, 248, 400, 625, 869
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HindIII AAGCTT 1 cut(s) 115
HinfI GANTC 2 cut(s) 272, 1004
HpaII CCGG 3 cut(s) 560, 963, 1138
HphI GGTGA 4 cut(s) 182, 386, 672, 1086
Hpy166II GTNNAC 2 cut(s) 139, 159
Hpy188I TCNGA 6 cut(s) 193, 331, 875, 1080, 1119, 1175
Hpy188III TCNNGA 9 cut(s) 57, 218, 224, 245, 443, 560, 838, 1001, 1024
Hpy8I GTNNAC 2 cut(s) 139, 159
Hpy99I CGWCG 3 cut(s) 79, 82, 137
HpyAV CCTTC 5 cut(s) 362, 540, 744, 844, 1101
HpyCH4III ACNGT 3 cut(s) 518, 906, 1021
HpyCH4IV ACGT 2 cut(s) 77, 135
HpyCH4V TGCA 6 cut(s) 53, 283, 544, 742, 811, 929
HpyF10VI GCNNNNNNNGC 8 cut(s) 27, 71, 123, 748, 786, 851, 926, 1038
HpyF3I CTNAG 3 cut(s) 328, 728, 975
HpySE526I ACGT 2 cut(s) 77, 135
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 8 cut(s) 65, 145, 221, 233, 248, 400, 625, 869
HspAI GCGC 1 cut(s) 65
Kpn2I TCCGGA 1 cut(s) 559
Ksp22I TGATCA 3 cut(s) 103, 144, 220
KspI CCGCGG 1 cut(s) 852
Kzo9I GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
LguI GCTCTTC 1 cut(s) 1022
LmnI GCTCC 5 cut(s) 45, 405, 473, 850, 1016
Lsp1109I GCAGC 7 cut(s) 110, 477, 710, 754, 941, 1047, 1050
LweI GCATC 1 cut(s) 62
MaeI CTAG 3 cut(s) 690, 708, 1130
MaeII ACGT 2 cut(s) 77, 135
MaeIII GTNAC 4 cut(s) 345, 900, 906, 965
MalI GATC 8 cut(s) 105, 146, 216, 222, 228, 558, 877, 1142
MbiI CCGCTC 2 cut(s) 857, 1032
MboI GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
MboII GAAGA 7 cut(s) 306, 381, 419, 575, 624, 1004, 1039
MfeI CAATTG 2 cut(s) 536, 1157
MhlI GDGCHC 2 cut(s) 1013, 1078
MluCI AATT 6 cut(s) 304, 382, 391, 508, 536, 1157
MlyI GAGTC 1 cut(s) 998
MnlI CCTC 7 cut(s) 252, 337, 365, 481, 502, 770, 904
MroI TCCGGA 1 cut(s) 559
MroXI GAANNNNTTC 1 cut(s) 996
MseI TTAA 5 cut(s) 177, 207, 303, 825, 1110
MspA1I CMGCKG 3 cut(s) 638, 723, 851
MspI CCGG 3 cut(s) 560, 963, 1138
MunI CAATTG 2 cut(s) 536, 1157
Mva1269I GAATGC 1 cut(s) 847
MvnI CGCG 1 cut(s) 851
MwoI GCNNNNNNNGC 8 cut(s) 27, 71, 123, 748, 786, 851, 926, 1038
NdeI CATATG 1 cut(s) 108
NdeII GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
NlaIII CATG 8 cut(s) 65, 145, 221, 233, 248, 400, 625, 869
NlaIV GGNNCC 2 cut(s) 661, 1136
NmuCI GTSAC 2 cut(s) 900, 906
NotI GCGGCCGC 1 cut(s) 852
NspI RCATGY 1 cut(s) 65
NspV TTCGAA 1 cut(s) 818
PaeR7I CTCGAG 1 cut(s) 1006
PagI TCATGA 2 cut(s) 217, 244
PciSI GCTCTTC 1 cut(s) 1022
PctI GAATGC 1 cut(s) 847
PdmI GAANNNNTTC 1 cut(s) 996
PfeI GAWTC 1 cut(s) 272
PflMI CCANNNNNTGG 1 cut(s) 1159
PleI GAGTC 1 cut(s) 998
PpsI GAGTC 1 cut(s) 998
PshBI ATTAAT 2 cut(s) 177, 825
Psp124BI GAGCTC 2 cut(s) 1013, 1078
PspFI CCCAGC 1 cut(s) 719
PspN4I GGNNCC 2 cut(s) 661, 1136
PspPI GGNCC 1 cut(s) 1135
PspXI VCTCGAGB 1 cut(s) 1006
PstI CTGCAG 2 cut(s) 744, 931
PstNI CAGNNNCTG 1 cut(s) 1044
PvuII CAGCTG 2 cut(s) 638, 723
RsaI GTAC 4 cut(s) 576, 694, 1018, 1054
RsaNI GTAC 4 cut(s) 575, 693, 1017, 1053
SacI GAGCTC 2 cut(s) 1013, 1078
SacII CCGCGG 1 cut(s) 852
SapI GCTCTTC 1 cut(s) 1022
SaqAI TTAA 5 cut(s) 177, 207, 303, 825, 1110
Sau3AI GATC 8 cut(s) 103, 144, 214, 220, 226, 556, 875, 1140
Sau96I GGNCC 1 cut(s) 1135
ScaI AGTACT 2 cut(s) 694, 1054
SchI GAGTC 1 cut(s) 998
SduI GDGCHC 2 cut(s) 1013, 1078
SfaNI GCATC 1 cut(s) 62
SfcI CTRYAG 4 cut(s) 90, 740, 927, 1045
Sfr274I CTCGAG 1 cut(s) 1006
Sfr303I CCGCGG 1 cut(s) 852
SfuI TTCGAA 1 cut(s) 818
SgrBI CCGCGG 1 cut(s) 852
SinI GGWCC 1 cut(s) 1135
SlaI CTCGAG 1 cut(s) 1006
SmlI CTYRAG 1 cut(s) 1006
SmoI CTYRAG 1 cut(s) 1006
Sse9I AATT 6 cut(s) 304, 382, 391, 508, 536, 1157
SspI AATATT 2 cut(s) 181, 823
SspMI CTAG 3 cut(s) 690, 708, 1130
SstI GAGCTC 2 cut(s) 1013, 1078
StyI CCWWGG 1 cut(s) 746
TaaI ACNGT 3 cut(s) 518, 906, 1021
TaiI ACGT 2 cut(s) 80, 138
TaqI TCGA 3 cut(s) 56, 818, 1007
TasI AATT 6 cut(s) 304, 382, 391, 508, 536, 1157
TatI WGTACW 3 cut(s) 692, 1016, 1052
TauI GCSGC 5 cut(s) 168, 783, 854, 857, 1035
TfiI GAWTC 1 cut(s) 272
Tru1I TTAA 5 cut(s) 177, 207, 303, 825, 1110
Tru9I TTAA 5 cut(s) 177, 207, 303, 825, 1110
TscAI CASTG 5 cut(s) 55, 327, 481, 790, 796
TseFI GTSAC 2 cut(s) 900, 906
TseI GCWGC 7 cut(s) 123, 465, 723, 742, 929, 1035, 1038
Tsp45I GTSAC 2 cut(s) 900, 906
TspDTI ATGAA 5 cut(s) 297, 377, 449, 957, 1005
TspRI CASTG 5 cut(s) 55, 327, 481, 790, 796
Van91I CCANNNNNTGG 1 cut(s) 1159
VpaK11BI GGWCC 1 cut(s) 1135
VspI ATTAAT 2 cut(s) 177, 825
XceI RCATGY 1 cut(s) 65
XhoI CTCGAG 1 cut(s) 1006
XmiI GTMKAC 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 996
XspI CTAG 3 cut(s) 690, 708, 1130
ZraI GACGTC 1 cut(s) 78
ZrmI AGTACT 2 cut(s) 694, 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.