Rorug04G0414200

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0006391
Physical Location & Seq
Forward (+)
57577194 .. 57582941
5748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0414200.1

Sequence Viewer

Length: 1704 bp
ATGCACCCATACAACCGGCTACCGAGTAGCGGACACAGCAGCCCGTCGCCGCCGCATTCCCCGCTCCGTTCGCCCCGGTTCCGCCAAACCCGGTCCAAAGCCTCGGGCCGGTTCATTAACCAGCCGGGTCGGACCCTAATCCAGCGCATCGCCTGGCACCTCCTCTCCGTCCTCATCCGCCGCCAAGGCTTCTTCCTCTTCGCTCCTCTCCTCTACATCTCCGGCATGCTCCTCTACATGGGCTCCGGCTCCTTCCCCGACGACCGCCTCCCCATCATCCCCCGCCATTTCGCTCCCGGCTCCCGCTACCGGAGCCCCCAGCTCTACGACAAGCTCCGCCCCGAAATGGACGCCGATAACTCCTCCGCCGATGCGATTTCAACTGTCTGGAAGCATTCGTTCAGTGCCTATAAGGGTGTGGAATGGAGACCCTGTGTAAACACCTCCTCTGGAGTTTTACCCGAGTCAAATGGTTATATATATGTTGAGGCAAATGGTGGTCTAAATCAGCAGAGGACTTCTATATGCAATGCGGTTGCCGTTGCAGGATATCTTAATGCAACACTTTTAATTCCCAATTTTCATTTTCATAGCATCTGGAGAGATCCAAGTAAATTTGGTGACATTTATGATGAAGAATATTTCATCAGTTCGTTGGAAAATGATGTGCGAGTGGTCAACAGGATTCCTGAGTATTTGATGGAACGATTTGATCACAATATGACCAATGTTTACAACTTCAGAATTAAAGCATGGTCGCCAATTTCGTATTATAAGGATGCGGTTCTCCCGAGGCTACTTGAAGAAAAGGTTATACGGATTTCTCCTTTTGCCAATCGGTTGTCATTTGATTCTCCTCCTGCTGTTCAACGACTTAGATGCTTGGCTAATTATAAAGCTTTAAGGTTTTCAAGTCCTATATTAACGTTGGGAGAAACTTTAGTTGCAAGAATGAAAGAACGCAGTGCAAATTACGGTGGCAAATATATTTCTGTGCATCTTCGATTTGAAGAGGACATGGTTGCCTTTTCTTGTTGTGAATTTGATGGTGGAGCGCAAGAAAAGGAAGACATGACAGAAGCAAGGGAAAGGGGTTGGAAAGGGAAATTTAACAAACCTGGAAGGGTTATACGTCCTGGAGCAAACAGGATCAATGGAAAATGTCCCCTCACTCCTTTAGAGGTTGGCTTGATGCTTAGGGGAATGGGATTTGATGAGAACTCATTTATCTACTTGGCATCTGGAAAGATATACGATGCTGAGAGAACAATGGCTCCATTGCTGGAAATGTTTCCGAATTTGATCACAAAACAGATGATTGCTACAGATGAGGAACTTGCTCCATACAAGAATTATTCTTCCAGGATGGCTGCAATAGATTACACTGTTTGTCTTCACAGTGAGGTATTTGTGACAACTCAAGGAGGAAACTTTCCCCATTTTCTGATGGGACACAGAAGATACTTGTATGGTGGACACTCCAAGACTATTAGGCCTGACAAGCGGAAGTTAGCATTACTCTTTGATAATCCAAAAATCGGATGGAAGACTTTCAAGCGGCAATTGCTTAGTATGCGGTCTCATAGTGATTCAAAGGGGTTTGAGCTTAAGAGGCCAAATGATTCTATATATACCTTCCCTTGCCCAGATTGCATGTGCCGAACAAACAAGTCAGAGGATTCAAGACCGTCATTAGCTACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000820 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000987 GO:0001012 GO:0001067 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006521 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031668 GO:0032774 GO:0032870 GO:0033238 GO:0033554 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0097306 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2000214 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

567

Amino Acids

64.8

Weight (kDa)

9.47

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 159 - 489 4.9e-102 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 774, 894
AccB1I GGYRCC 1 cut(s) 156
AccBSI CCGCTC 1 cut(s) 64
AclI AACGTT 1 cut(s) 926
AclWI GGATC 2 cut(s) 599, 1157
AcsI RAATTY 4 cut(s) 614, 1040, 1106, 1297
AcuI CTGAAG 1 cut(s) 724
AcyI GRCGYC 1 cut(s) 351
AfiI CCNNNNNNNGG 6 cut(s) 29, 108, 238, 309, 346, 1538
AflII CTTAAG 1 cut(s) 1607
AgsI TTSAA 8 cut(s) 381, 803, 869, 912, 1010, 1555, 1593, 1683
AjnI CCWGG 4 cut(s) 152, 1117, 1135, 1361
AloI GAACNNNNNNTCC 2 cut(s) 1258, 1290
AluBI AGCT 5 cut(s) 322, 334, 899, 1606, 1697
AluI AGCT 5 cut(s) 322, 334, 899, 1606, 1697
Alw26I GTCTC 2 cut(s) 421, 1584
AlwI GGATC 2 cut(s) 599, 1157
Ama87I CYCGRG 3 cut(s) 103, 461, 790
AoxI GGCC 3 cut(s) 106, 1493, 1613
ApeKI GCWGC 2 cut(s) 39, 1370
ApoI RAATTY 4 cut(s) 614, 1040, 1106, 1297
Asp700I GAANNNNTTC 2 cut(s) 1290, 1550
AspLEI GCGC 2 cut(s) 147, 1057
AspS9I GGNCC 3 cut(s) 93, 106, 132
AsuC2I CCSGG 4 cut(s) 76, 91, 126, 297
AsuHPI GGTGA 1 cut(s) 632
AvaI CYCGRG 3 cut(s) 103, 461, 790
AvaII GGWCC 2 cut(s) 93, 132
BanI GGYRCC 1 cut(s) 156
BanII GRGCYC 2 cut(s) 245, 317
BbsI GAAGAC 3 cut(s) 1074, 1385, 1553
BbvI GCAGC 2 cut(s) 51, 1357
BccI CCATC 6 cut(s) 281, 694, 1040, 1360, 1441, 1536
BceAI ACGGC 1 cut(s) 524
BcgI CGANNNNNNTGC 2 cut(s) 861, 895
BciT130I CCWGG 4 cut(s) 154, 1119, 1137, 1363
BclI TGATCA 2 cut(s) 712, 1302
BcnI CCSGG 4 cut(s) 76, 91, 126, 297
BcoDI GTCTC 2 cut(s) 421, 1584
BfmI CTRYAG 1 cut(s) 1323
BfrI CTTAAG 1 cut(s) 1607
BglI GCCNNNNNGGC 1 cut(s) 186
BisI GCNGC 6 cut(s) 40, 50, 53, 181, 1371, 1559
BlsI GCNGC 6 cut(s) 41, 51, 54, 182, 1372, 1560
Bme1390I CCNGG 8 cut(s) 76, 91, 126, 154, 297, 1119, 1137, 1363
Bme18I GGWCC 2 cut(s) 93, 132
BmeT110I CYCGRG 3 cut(s) 103, 461, 790
BmgT120I GGNCC 3 cut(s) 93, 106, 132
BmiI GGNNCC 8 cut(s) 80, 134, 158, 244, 250, 301, 314, 1275
BmrFI CCNGG 8 cut(s) 76, 91, 126, 154, 297, 1119, 1137, 1363
BmsI GCATC 9 cut(s) 156, 361, 603, 769, 869, 1006, 1182, 1246, 1247
BpiI GAAGAC 3 cut(s) 1074, 1385, 1553
BpmI CTGGAG 3 cut(s) 471, 619, 1158
Bpu10I CCTNAGC 1 cut(s) 1196
BpuEI CTTGAG 1 cut(s) 1404
BpuMI CCSGG 4 cut(s) 76, 91, 126, 297
BsaAI YACGTR 1 cut(s) 1701
BsaHI GRCGYC 1 cut(s) 351
BsaI GGTCTC 2 cut(s) 421, 1584
BsaJI CCNNGG 4 cut(s) 74, 102, 184, 791
BsaWI WCCGGW 1 cut(s) 309
BsaXI ACNNNNNCTCC 8 cut(s) 149, 179, 227, 257, 418, 448, 1258, 1288
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 108, 238, 309, 346, 1538
Bse118I RCCGGY 2 cut(s) 15, 108
Bse3DI GCAATG 2 cut(s) 535, 1277
BseBI CCWGG 4 cut(s) 154, 1119, 1137, 1363
BseDI CCNNGG 4 cut(s) 74, 102, 184, 791
BseGI GGATG 5 cut(s) 174, 276, 784, 1371, 1547
BseLI CCNNNNNNNGG 6 cut(s) 29, 108, 238, 309, 346, 1538
BseMI GCAATG 2 cut(s) 535, 1277
BseMII CTCAG 2 cut(s) 681, 1251
BseRI GAGGAG 7 cut(s) 152, 195, 200, 221, 352, 436, 846
BseXI GCAGC 2 cut(s) 51, 1357
BseYI CCCAGC 1 cut(s) 318
Bsh1285I CGRYCG 1 cut(s) 265
BshFI GGCC 3 cut(s) 108, 1495, 1615
BshNI GGYRCC 1 cut(s) 156
BsiEI CGRYCG 1 cut(s) 265
BsiHKCI CYCGRG 3 cut(s) 103, 461, 790
BsiSI CCGG 9 cut(s) 16, 76, 91, 109, 125, 222, 246, 297, 310
BslFI GGGAC 2 cut(s) 1149, 1464
BslI CCNNNNNNNGG 6 cut(s) 29, 108, 238, 309, 346, 1538
BsmAI GTCTC 2 cut(s) 421, 1584
BsmFI GGGAC 2 cut(s) 1149, 1464
BsmI GAATGC 2 cut(s) 55, 394
BsnI GGCC 3 cut(s) 108, 1495, 1615
Bso31I GGTCTC 2 cut(s) 421, 1584
BsoBI CYCGRG 3 cut(s) 103, 461, 790
Bsp1286I GDGCHC 2 cut(s) 245, 317
Bsp143I GATC 4 cut(s) 604, 712, 1149, 1302
BspANI GGCC 3 cut(s) 108, 1495, 1615
BspCNI CTCAG 2 cut(s) 682, 1252
BspLI GGNNCC 8 cut(s) 80, 134, 158, 244, 250, 301, 314, 1275
BspPI GGATC 2 cut(s) 599, 1157
BspT107I GGYRCC 1 cut(s) 156
BspTI CTTAAG 1 cut(s) 1607
BspTNI GGTCTC 2 cut(s) 421, 1584
BsrBI CCGCTC 1 cut(s) 64
BsrDI GCAATG 2 cut(s) 535, 1277
BsrFI RCCGGY 2 cut(s) 15, 108
BssAI RCCGGY 2 cut(s) 15, 108
BssECI CCNNGG 4 cut(s) 74, 102, 184, 791
BssMI GATC 4 cut(s) 604, 712, 1149, 1302
BssNI GRCGYC 1 cut(s) 351
BssT1I CCWWGG 1 cut(s) 184
Bst2UI CCWGG 4 cut(s) 154, 1119, 1137, 1363
Bst4CI ACNGT 5 cut(s) 385, 977, 1387, 1400, 1689
Bst6I CTCTTC 2 cut(s) 203, 1005
BstACI GRCGYC 1 cut(s) 351
BstAFI CTTAAG 1 cut(s) 1607
BstBAI YACGTR 1 cut(s) 1701
BstC8I GCNNGC 1 cut(s) 227
BstDEI CTNAG 5 cut(s) 690, 875, 1196, 1260, 1568
BstF5I GGATG 5 cut(s) 174, 276, 784, 1371, 1547
BstHHI GCGC 2 cut(s) 147, 1057
BstKTI GATC 4 cut(s) 607, 715, 1152, 1305
BstMAI GTCTC 2 cut(s) 421, 1584
BstMBI GATC 4 cut(s) 604, 712, 1149, 1302
BstMCI CGRYCG 1 cut(s) 265
BstNI CCWGG 4 cut(s) 154, 1119, 1137, 1363
BstNSI RCATGY 2 cut(s) 229, 1657
BstSCI CCNGG 8 cut(s) 74, 89, 124, 152, 295, 1117, 1135, 1361
BstSFI CTRYAG 1 cut(s) 1323
BstV1I GCAGC 2 cut(s) 51, 1357
BstV2I GAAGAC 3 cut(s) 1074, 1385, 1553
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
BsuRI GGCC 3 cut(s) 108, 1495, 1615
BtgZI GCGATG 1 cut(s) 133
BtsCI GGATG 5 cut(s) 174, 276, 784, 1371, 1547
BtsI GCAGTG 1 cut(s) 970
BtsIMutI CAGTG 4 cut(s) 409, 970, 1383, 1405
Cac8I GCNNGC 1 cut(s) 227
CfoI GCGC 2 cut(s) 147, 1057
Cfr10I RCCGGY 2 cut(s) 15, 108
Cfr13I GGNCC 3 cut(s) 93, 106, 132
CseI GACGC 1 cut(s) 359
CviAII CATG 6 cut(s) 226, 238, 753, 1018, 1072, 1654
DdeI CTNAG 5 cut(s) 690, 875, 1196, 1260, 1568
DpnI GATC 4 cut(s) 606, 714, 1151, 1304
DpnII GATC 4 cut(s) 604, 712, 1149, 1302
Eam1104I CTCTTC 2 cut(s) 203, 1005
EarI CTCTTC 2 cut(s) 203, 1005
EciI GGCGGA 4 cut(s) 71, 167, 326, 355
Eco130I CCWWGG 1 cut(s) 184
Eco147I AGGCCT 1 cut(s) 1495
Eco24I GRGCYC 2 cut(s) 245, 317
Eco31I GGTCTC 2 cut(s) 421, 1584
Eco32I GATATC 1 cut(s) 551
Eco47I GGWCC 2 cut(s) 93, 132
Eco57I CTGAAG 1 cut(s) 724
Eco88I CYCGRG 3 cut(s) 103, 461, 790
EcoRII CCWGG 4 cut(s) 152, 1117, 1135, 1361
EcoRV GATATC 1 cut(s) 551
EcoT14I CCWWGG 1 cut(s) 184
EcoT38I GRGCYC 2 cut(s) 245, 317
ErhI CCWWGG 1 cut(s) 184
FaeI CATG 6 cut(s) 229, 241, 756, 1021, 1075, 1657
FaqI GGGAC 2 cut(s) 1149, 1464
FatI CATG 6 cut(s) 225, 237, 752, 1017, 1071, 1653
FauI CCCGC 3 cut(s) 69, 290, 311
FbaI TGATCA 2 cut(s) 712, 1302
Fnu4HI GCNGC 6 cut(s) 40, 50, 53, 181, 1371, 1559
FokI GGATG 5 cut(s) 161, 263, 791, 1378, 1554
FriOI GRGCYC 2 cut(s) 245, 317
Fsp4HI GCNGC 6 cut(s) 40, 50, 53, 181, 1371, 1559
GlaI GCGC 2 cut(s) 146, 1056
GluI GCNGC 6 cut(s) 40, 50, 53, 181, 1371, 1559
GsaI CCCAGC 1 cut(s) 322
GsuI CTGGAG 3 cut(s) 471, 619, 1158
HaeIII GGCC 3 cut(s) 108, 1495, 1615
HapII CCGG 9 cut(s) 16, 76, 91, 109, 125, 222, 246, 297, 310
HgaI GACGC 1 cut(s) 359
HhaI GCGC 2 cut(s) 147, 1057
Hin1I GRCGYC 1 cut(s) 351
Hin1II CATG 6 cut(s) 229, 241, 756, 1021, 1075, 1657
Hin6I GCGC 2 cut(s) 145, 1055
HinP1I GCGC 2 cut(s) 145, 1055
HincII GTYRAC 1 cut(s) 679
HindII GTYRAC 1 cut(s) 679
HindIII AAGCTT 1 cut(s) 897
HinfI GANTC 6 cut(s) 464, 685, 851, 1589, 1622, 1679
HpaII CCGG 9 cut(s) 16, 76, 91, 109, 125, 222, 246, 297, 310
HphI GGTGA 1 cut(s) 632
Hpy166II GTNNAC 4 cut(s) 439, 679, 733, 1475
Hpy188I TCNGA 6 cut(s) 132, 743, 1296, 1446, 1541, 1675
Hpy188III TCNNGA 7 cut(s) 388, 450, 598, 689, 790, 1242, 1683
Hpy8I GTNNAC 4 cut(s) 439, 679, 733, 1475
Hpy99I CGWCG 2 cut(s) 49, 263
HpyAV CCTTC 3 cut(s) 262, 1116, 1645
HpyCH4III ACNGT 5 cut(s) 385, 977, 1387, 1400, 1689
HpyCH4IV ACGT 3 cut(s) 926, 1132, 1700
HpyCH4V TGCA 9 cut(s) 4, 528, 545, 560, 947, 968, 997, 1373, 1653
HpyF3I CTNAG 5 cut(s) 690, 875, 1196, 1260, 1568
HpySE526I ACGT 3 cut(s) 926, 1132, 1700
Hsp92I GRCGYC 1 cut(s) 351
Hsp92II CATG 6 cut(s) 229, 241, 756, 1021, 1075, 1657
HspAI GCGC 2 cut(s) 145, 1055
Ksp22I TGATCA 2 cut(s) 712, 1302
Kzo9I GATC 4 cut(s) 604, 712, 1149, 1302
Lsp1109I GCAGC 2 cut(s) 51, 1357
LweI GCATC 9 cut(s) 156, 361, 603, 769, 869, 1006, 1182, 1246, 1247
MaeII ACGT 3 cut(s) 926, 1132, 1700
MaeIII GTNAC 2 cut(s) 620, 1411
MalI GATC 4 cut(s) 606, 714, 1151, 1304
MbiI CCGCTC 1 cut(s) 64
MboI GATC 4 cut(s) 604, 712, 1149, 1302
MfeI CAATTG 1 cut(s) 1562
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 2 cut(s) 245, 317
MlyI GAGTC 1 cut(s) 473
MmeI TCCRAC 3 cut(s) 110, 636, 1076
MroXI GAANNNNTTC 2 cut(s) 1290, 1550
MseI TTAA 8 cut(s) 117, 555, 569, 747, 902, 923, 1110, 1608
MspCI CTTAAG 1 cut(s) 1607
MspI CCGG 9 cut(s) 16, 76, 91, 109, 125, 222, 246, 297, 310
MspR9I CCNGG 8 cut(s) 76, 91, 126, 154, 297, 1119, 1137, 1363
MunI CAATTG 1 cut(s) 1562
Mva1269I GAATGC 2 cut(s) 55, 394
MvaI CCWGG 4 cut(s) 154, 1119, 1137, 1363
NciI CCSGG 4 cut(s) 76, 91, 126, 297
NdeII GATC 4 cut(s) 604, 712, 1149, 1302
NlaIII CATG 6 cut(s) 229, 241, 756, 1021, 1075, 1657
NlaIV GGNNCC 8 cut(s) 80, 134, 158, 244, 250, 301, 314, 1275
NmuCI GTSAC 2 cut(s) 620, 1411
NspI RCATGY 2 cut(s) 229, 1657
PaeI GCATGC 1 cut(s) 229
PceI AGGCCT 1 cut(s) 1495
PcsI WCGNNNNNNNCGW 1 cut(s) 764
PctI GAATGC 2 cut(s) 55, 394
PdmI GAANNNNTTC 2 cut(s) 1290, 1550
PfeI GAWTC 5 cut(s) 685, 851, 1589, 1622, 1679
PfoI TCCNGGA 2 cut(s) 1135, 1361
PkrI GCNGC 6 cut(s) 41, 51, 54, 182, 1372, 1560
PleI GAGTC 1 cut(s) 472
PpsI GAGTC 1 cut(s) 472
Ppu21I YACGTR 1 cut(s) 1701
PsiI TTATAA 2 cut(s) 774, 894
Psp1406I AACGTT 1 cut(s) 926
Psp6I CCWGG 4 cut(s) 152, 1117, 1135, 1361
PspFI CCCAGC 1 cut(s) 318
PspGI CCWGG 4 cut(s) 152, 1117, 1135, 1361
PspN4I GGNNCC 8 cut(s) 80, 134, 158, 244, 250, 301, 314, 1275
PspPI GGNCC 3 cut(s) 93, 106, 132
PsuI RGATCY 1 cut(s) 604
SaqAI TTAA 8 cut(s) 117, 555, 569, 747, 902, 923, 1110, 1608
SatI GCNGC 6 cut(s) 40, 50, 53, 181, 1371, 1559
Sau3AI GATC 4 cut(s) 604, 712, 1149, 1302
Sau96I GGNCC 3 cut(s) 93, 106, 132
SchI GAGTC 1 cut(s) 473
ScrFI CCNGG 8 cut(s) 76, 91, 126, 154, 297, 1119, 1137, 1363
SduI GDGCHC 2 cut(s) 245, 317
SfaNI GCATC 9 cut(s) 156, 361, 603, 769, 869, 1006, 1182, 1246, 1247
SfcI CTRYAG 1 cut(s) 1323
SinI GGWCC 2 cut(s) 93, 132
SmlI CTYRAG 2 cut(s) 1419, 1607
SmoI CTYRAG 2 cut(s) 1419, 1607
SphI GCATGC 1 cut(s) 229
SseBI AGGCCT 1 cut(s) 1495
SspI AATATT 1 cut(s) 641
StuI AGGCCT 1 cut(s) 1495
StyD4I CCNGG 8 cut(s) 74, 89, 124, 152, 295, 1117, 1135, 1361
StyI CCWWGG 1 cut(s) 184
TaaI ACNGT 5 cut(s) 385, 977, 1387, 1400, 1689
TaiI ACGT 3 cut(s) 929, 1135, 1703
TaqI TCGA 1 cut(s) 1003
TauI GCSGC 4 cut(s) 52, 55, 183, 1561
TfiI GAWTC 5 cut(s) 685, 851, 1589, 1622, 1679
Tru1I TTAA 8 cut(s) 117, 555, 569, 747, 902, 923, 1110, 1608
Tru9I TTAA 8 cut(s) 117, 555, 569, 747, 902, 923, 1110, 1608
TscAI CASTG 4 cut(s) 409, 970, 1390, 1405
TseFI GTSAC 2 cut(s) 620, 1411
TseI GCWGC 2 cut(s) 39, 1370
Tsp45I GTSAC 2 cut(s) 620, 1411
TspDTI ATGAA 6 cut(s) 103, 572, 578, 634, 648, 968
TspGWI ACGGA 3 cut(s) 56, 157, 832
TspRI CASTG 4 cut(s) 409, 970, 1390, 1405
Vha464I CTTAAG 1 cut(s) 1607
VpaK11BI GGWCC 2 cut(s) 93, 132
XapI RAATTY 4 cut(s) 614, 1040, 1106, 1297
XceI RCATGY 2 cut(s) 229, 1657
XcmI CCANNNNNNNNNTGG 1 cut(s) 1539
XmnI GAANNNNTTC 2 cut(s) 1290, 1550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.