RchiOBHm_Chr5g0021871

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
16025299 .. 16026313
1015 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30190

Sequence Viewer

Length: 192 bp
ATGAGAATTGGATTGGATGGATTTGTAGAAGGGTTGATTCAAATGAAGGAAATGAGATTTGAGATATGGCTATTGGAGAAGTGGGGAATTAAGGTTTTGGGCGGCGGAGCTATGGCGTTGGTGATGACGGGTTTAGATGGAGCTCATGGGTTGTTGATGGGATTGTTTTGGTTTTCTTTTCTTTTTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.05

Weight (kDa)

5.6

Isoelectric Point (pI)

5.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019011)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 102, 105
AgsI TTSAA 1 cut(s) 41
AluBI AGCT 2 cut(s) 110, 143
AluI AGCT 2 cut(s) 110, 143
Alw21I GWGCWC 1 cut(s) 145
AsuHPI GGTGA 1 cut(s) 133
BanII GRGCYC 1 cut(s) 145
Bbv12I GWGCWC 1 cut(s) 145
BccI CCATC 3 cut(s) 11, 131, 151
BisI GCNGC 1 cut(s) 103
BlsI GCNGC 1 cut(s) 104
BseGI GGATG 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 145
Bsp1286I GDGCHC 1 cut(s) 145
BspACI CCGC 2 cut(s) 102, 105
BstF5I GGATG 1 cut(s) 22
BtsCI GGATG 1 cut(s) 22
CviAII CATG 1 cut(s) 146
CviJI RGCY 3 cut(s) 70, 110, 143
CviKI_1 RGCY 3 cut(s) 70, 110, 143
EciI GGCGGA 1 cut(s) 120
Ecl136II GAGCTC 1 cut(s) 143
Eco24I GRGCYC 1 cut(s) 145
Eco53kI GAGCTC 1 cut(s) 143
EcoICRI GAGCTC 1 cut(s) 143
EcoT38I GRGCYC 1 cut(s) 145
FaeI CATG 1 cut(s) 149
FaiI YATR 3 cut(s) 67, 113, 147
FatI CATG 1 cut(s) 145
Fnu4HI GCNGC 1 cut(s) 103
FokI GGATG 1 cut(s) 29
FriOI GRGCYC 1 cut(s) 145
Fsp4HI GCNGC 1 cut(s) 103
GluI GCNGC 1 cut(s) 103
Hin1II CATG 1 cut(s) 149
HinfI GANTC 1 cut(s) 37
HphI GGTGA 1 cut(s) 133
HpyAV CCTTC 2 cut(s) 23, 40
Hsp92II CATG 1 cut(s) 149
LmnI GCTCC 2 cut(s) 107, 140
MhlI GDGCHC 1 cut(s) 145
MluCI AATT 2 cut(s) 6, 87
MseI TTAA 1 cut(s) 90
NlaIII CATG 1 cut(s) 149
PfeI GAWTC 1 cut(s) 37
PkrI GCNGC 1 cut(s) 104
Psp124BI GAGCTC 1 cut(s) 145
SacI GAGCTC 1 cut(s) 145
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 1 cut(s) 103
SduI GDGCHC 1 cut(s) 145
SetI ASST 3 cut(s) 96, 112, 145
SgeI CNNG 2 cut(s) 141, 158
Sse9I AATT 2 cut(s) 6, 87
SsiI CCGC 2 cut(s) 102, 105
SstI GAGCTC 1 cut(s) 145
TasI AATT 2 cut(s) 6, 87
TauI GCSGC 1 cut(s) 105
TfiI GAWTC 1 cut(s) 37
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TspDTI ATGAA 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.