Rh7DG332100

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
40725399 .. 40728107
2709 bp
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UTR
Exon/CDS
Intron
Rh7DG332100.1

Sequence Viewer

Length: 282 bp
ATGGCGTCAATTCAGATGAAATTAGCAGCAGCTCAGAGTTCTCAAGTGAAGGGGGGCTATGATGACTCCACCGCCACGTCAGTATTGCAGAAGGATAATTCAGCCCAGAAGAAAGCATTCATTGTCATTGGAATTAACACTGCTTTGAGTAGTAGGAAGCGGCAAGATTCGGTTAGAGAGACTTGGATGCCTCAAGGTCAGTTGGCTACAAGATCCGTCAACAACATCAAGTCTTTAGGGTGGGTTGAGTCCATTGAATTGATTTTGGAGGATCGCCGTTGA

Protein Analysis

93

Amino Acids

10.25

Weight (kDa)

9.77

Isoelectric Point (pI)

69.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019011)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 72, 160
AclWI GGATC 2 cut(s) 207, 279
AcyI GRCGYC 1 cut(s) 5
AgsI TTSAA 1 cut(s) 257
AjiI CACGTC 1 cut(s) 78
AluBI AGCT 1 cut(s) 32
AluI AGCT 1 cut(s) 32
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 2 cut(s) 207, 279
ApeKI GCWGC 2 cut(s) 26, 29
Asp700I GAANNNNTTC 1 cut(s) 116
BbvI GCAGC 2 cut(s) 38, 41
BceAI ACGGC 1 cut(s) 261
BcoDI GTCTC 1 cut(s) 173
BisI GCNGC 3 cut(s) 27, 30, 161
BlsI GCNGC 3 cut(s) 28, 31, 162
BmgBI CACGTC 1 cut(s) 78
BmsI GCATC 1 cut(s) 177
BpuEI CTTGAG 2 cut(s) 27, 177
BsaHI GRCGYC 1 cut(s) 5
BseGI GGATG 1 cut(s) 192
BseMII CTCAG 1 cut(s) 47
BseXI GCAGC 2 cut(s) 38, 41
BsmAI GTCTC 1 cut(s) 173
BsmI GAATGC 1 cut(s) 116
Bsp143I GATC 2 cut(s) 212, 271
BspACI CCGC 2 cut(s) 72, 160
BspCNI CTCAG 1 cut(s) 46
BspPI GGATC 2 cut(s) 207, 279
BssMI GATC 2 cut(s) 212, 271
BssNI GRCGYC 1 cut(s) 5
BstACI GRCGYC 1 cut(s) 5
BstDEI CTNAG 1 cut(s) 33
BstF5I GGATG 1 cut(s) 192
BstKTI GATC 2 cut(s) 215, 274
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 2 cut(s) 212, 271
BstV1I GCAGC 2 cut(s) 38, 41
BstX2I RGATCY 1 cut(s) 212
BstYI RGATCY 1 cut(s) 212
BtrI CACGTC 1 cut(s) 78
BtsCI GGATG 1 cut(s) 192
BtsI GCAGTG 1 cut(s) 138
BtsIMutI CAGTG 1 cut(s) 138
CviJI RGCY 4 cut(s) 32, 57, 104, 206
CviKI_1 RGCY 4 cut(s) 32, 57, 104, 206
DdeI CTNAG 1 cut(s) 33
DpnI GATC 2 cut(s) 214, 273
DpnII GATC 2 cut(s) 212, 271
FaiI YATR 1 cut(s) 60
Fnu4HI GCNGC 3 cut(s) 27, 30, 161
FokI GGATG 1 cut(s) 199
Fsp4HI GCNGC 3 cut(s) 27, 30, 161
GluI GCNGC 3 cut(s) 27, 30, 161
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 3 cut(s) 65, 167, 248
Hpy166II GTNNAC 1 cut(s) 220
Hpy188I TCNGA 2 cut(s) 15, 36
Hpy8I GTNNAC 1 cut(s) 220
HpyAV CCTTC 2 cut(s) 43, 85
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 1 cut(s) 88
HpyF3I CTNAG 1 cut(s) 33
HpySE526I ACGT 1 cut(s) 77
Hsp92I GRCGYC 1 cut(s) 5
Kzo9I GATC 2 cut(s) 212, 271
LpnPI CCDG 1 cut(s) 119
Lsp1109I GCAGC 2 cut(s) 38, 41
LweI GCATC 1 cut(s) 177
MaeII ACGT 1 cut(s) 77
MalI GATC 2 cut(s) 214, 273
MboI GATC 2 cut(s) 212, 271
MboII GAAGA 1 cut(s) 121
MflI RGATCY 1 cut(s) 212
MluCI AATT 5 cut(s) 9, 20, 97, 132, 257
MlyI GAGTC 2 cut(s) 59, 257
MnlI CCTC 2 cut(s) 201, 262
MroXI GAANNNNTTC 1 cut(s) 116
MseI TTAA 1 cut(s) 135
Mva1269I GAATGC 1 cut(s) 116
NdeII GATC 2 cut(s) 212, 271
PctI GAATGC 1 cut(s) 116
PdmI GAANNNNTTC 1 cut(s) 116
PfeI GAWTC 1 cut(s) 167
PkrI GCNGC 3 cut(s) 28, 31, 162
PleI GAGTC 2 cut(s) 59, 256
PpsI GAGTC 2 cut(s) 59, 256
PsuI RGATCY 1 cut(s) 212
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 3 cut(s) 27, 30, 161
Sau3AI GATC 2 cut(s) 212, 271
SchI GAGTC 2 cut(s) 59, 257
SetI ASST 3 cut(s) 34, 80, 199
SfaNI GCATC 1 cut(s) 177
SgeI CNNG 8 cut(s) 56, 88, 118, 176, 195, 206, 222, 241
SmlI CTYRAG 2 cut(s) 42, 192
SmoI CTYRAG 2 cut(s) 42, 192
Sse9I AATT 5 cut(s) 9, 20, 97, 132, 257
SsiI CCGC 2 cut(s) 72, 160
TaiI ACGT 1 cut(s) 80
TasI AATT 5 cut(s) 9, 20, 97, 132, 257
TauI GCSGC 1 cut(s) 163
TfiI GAWTC 1 cut(s) 167
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TscAI CASTG 1 cut(s) 145
TseI GCWGC 2 cut(s) 26, 29
TspDTI ATGAA 2 cut(s) 32, 109
TspGWI ACGGA 1 cut(s) 205
TspRI CASTG 1 cut(s) 145
XmnI GAANNNNTTC 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.