Rh2AG425700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
63264075 .. 63264353
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG425700.1

Sequence Viewer

Length: 279 bp
ATGCAGGAGCAGAGAGAAATGCGTATGAGAATTGGATTGGATGGATTTGTAGAAGGGTTGATTCAAATGAAGGAAATGAGATTTGAGAGATGGCCATTGGAGAAGTGGGGAATTAAGGTTTTGGGCGGCGGAGCTGTGGCGTTTTGGGGCATGGAGCTGTTTGGCCTAAGATTGGGATTTGATGGTATTGGGATTTTTGAAGAAGGTTTTGAGCAGGGTTTGGATGGAGCTCATGGGTTGTTAATGGAATCGTTTTGGTTTTCTTTTCTTTTTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

92

Amino Acids

10.61

Weight (kDa)

4.78

Isoelectric Point (pI)

20.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019011)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 126, 129
AcoI YGGCCR 1 cut(s) 92
AfiI CCNNNNNNNGG 1 cut(s) 172
AgsI TTSAA 2 cut(s) 65, 200
AluBI AGCT 3 cut(s) 134, 157, 230
AluI AGCT 3 cut(s) 134, 157, 230
Alw21I GWGCWC 1 cut(s) 232
AoxI GGCC 2 cut(s) 92, 163
BalI TGGCCA 1 cut(s) 94
BanII GRGCYC 1 cut(s) 232
Bbv12I GWGCWC 1 cut(s) 232
BccI CCATC 4 cut(s) 35, 84, 176, 218
BisI GCNGC 1 cut(s) 127
BlsI GCNGC 1 cut(s) 128
Bsc4I CCNNNNNNNGG 1 cut(s) 172
BseGI GGATG 2 cut(s) 46, 229
BseLI CCNNNNNNNGG 1 cut(s) 172
BshFI GGCC 2 cut(s) 94, 165
BsiHKAI GWGCWC 1 cut(s) 232
BslI CCNNNNNNNGG 1 cut(s) 172
BsnI GGCC 2 cut(s) 94, 165
Bsp1286I GDGCHC 1 cut(s) 232
BspACI CCGC 2 cut(s) 126, 129
BspANI GGCC 2 cut(s) 94, 165
BstDEI CTNAG 1 cut(s) 167
BstF5I GGATG 2 cut(s) 46, 229
BsuRI GGCC 2 cut(s) 94, 165
BtsCI GGATG 2 cut(s) 46, 229
CviAII CATG 2 cut(s) 151, 233
CviJI RGCY 5 cut(s) 94, 134, 157, 165, 230
CviKI_1 RGCY 5 cut(s) 94, 134, 157, 165, 230
DdeI CTNAG 1 cut(s) 167
EaeI YGGCCR 1 cut(s) 92
EciI GGCGGA 1 cut(s) 144
Ecl136II GAGCTC 1 cut(s) 230
Eco24I GRGCYC 1 cut(s) 232
Eco53kI GAGCTC 1 cut(s) 230
EcoICRI GAGCTC 1 cut(s) 230
EcoT38I GRGCYC 1 cut(s) 232
FaeI CATG 2 cut(s) 154, 236
FaiI YATR 3 cut(s) 26, 152, 234
FatI CATG 2 cut(s) 150, 232
Fnu4HI GCNGC 1 cut(s) 127
FokI GGATG 2 cut(s) 53, 236
FriOI GRGCYC 1 cut(s) 232
Fsp4HI GCNGC 1 cut(s) 127
GluI GCNGC 1 cut(s) 127
HaeIII GGCC 2 cut(s) 94, 165
Hin1II CATG 2 cut(s) 154, 236
HinfI GANTC 2 cut(s) 61, 248
HpyAV CCTTC 3 cut(s) 47, 64, 197
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 1 cut(s) 167
Hsp92II CATG 2 cut(s) 154, 236
LmnI GCTCC 4 cut(s) 7, 131, 154, 227
LpnPI CCDG 1 cut(s) 200
MboII GAAGA 1 cut(s) 212
MhlI GDGCHC 1 cut(s) 232
MlsI TGGCCA 1 cut(s) 94
MluCI AATT 2 cut(s) 30, 111
MluNI TGGCCA 1 cut(s) 94
Mox20I TGGCCA 1 cut(s) 94
MscI TGGCCA 1 cut(s) 94
MseI TTAA 2 cut(s) 114, 242
Msp20I TGGCCA 1 cut(s) 94
NlaIII CATG 2 cut(s) 154, 236
PfeI GAWTC 2 cut(s) 61, 248
PkrI GCNGC 1 cut(s) 128
Psp124BI GAGCTC 1 cut(s) 232
SacI GAGCTC 1 cut(s) 232
SaqAI TTAA 2 cut(s) 114, 242
SatI GCNGC 1 cut(s) 127
SduI GDGCHC 1 cut(s) 232
SetI ASST 5 cut(s) 120, 136, 159, 208, 232
SgeI CNNG 4 cut(s) 17, 163, 227, 245
Sse9I AATT 2 cut(s) 30, 111
SsiI CCGC 2 cut(s) 126, 129
SstI GAGCTC 1 cut(s) 232
TasI AATT 2 cut(s) 30, 111
TauI GCSGC 1 cut(s) 129
TfiI GAWTC 2 cut(s) 61, 248
Tru1I TTAA 2 cut(s) 114, 242
Tru9I TTAA 2 cut(s) 114, 242
TspDTI ATGAA 1 cut(s) 83
XcmI CCANNNNNNNNNTGG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.