Epimerase family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g10480 FvH4_2g10480 |
| rosa_chinensis | RchiOBHm_Chr4g0411071 RchiOBHm_Chr4g0411081 RchiOBHm_Chr4g0437651 RchiOBHm_Chr5g0026021 |
| rosa_roxburghii | Rroxscaffold_3G00236100 |
| rosa_rugosa | Rorug05G0260800 |
| rosa_samantha | Rh4DG102300 Rh6AG157900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjnI | CCWGG | 1 cut(s) | 138 |
| AsuC2I | CCSGG | 1 cut(s) | 117 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 6, 40 |
| BciT130I | CCWGG | 1 cut(s) | 140 |
| BcnI | CCSGG | 1 cut(s) | 117 |
| BfaI | CTAG | 1 cut(s) | 90 |
| Bme1390I | CCNGG | 2 cut(s) | 117, 140 |
| BmrFI | CCNGG | 2 cut(s) | 117, 140 |
| BpuMI | CCSGG | 1 cut(s) | 117 |
| BseBI | CCWGG | 1 cut(s) | 140 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BsiSI | CCGG | 1 cut(s) | 116 |
| BsmI | GAATGC | 1 cut(s) | 58 |
| Bsp143I | GATC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BssMI | GATC | 1 cut(s) | 92 |
| Bst2UI | CCWGG | 1 cut(s) | 140 |
| Bst4CI | ACNGT | 1 cut(s) | 87 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstKTI | GATC | 1 cut(s) | 95 |
| BstMBI | GATC | 1 cut(s) | 92 |
| BstNI | CCWGG | 1 cut(s) | 140 |
| BstNSI | RCATGY | 1 cut(s) | 77 |
| BstSCI | CCNGG | 2 cut(s) | 115, 138 |
| CviAII | CATG | 1 cut(s) | 74 |
| CviJI | RGCY | 1 cut(s) | 101 |
| CviKI_1 | RGCY | 1 cut(s) | 101 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 1 cut(s) | 94 |
| DpnII | GATC | 1 cut(s) | 92 |
| EcoRII | CCWGG | 1 cut(s) | 138 |
| FaeI | CATG | 1 cut(s) | 77 |
| FaiI | YATR | 3 cut(s) | 8, 66, 75 |
| FatI | CATG | 1 cut(s) | 73 |
| FspBI | CTAG | 1 cut(s) | 90 |
| HapII | CCGG | 1 cut(s) | 116 |
| Hin1II | CATG | 1 cut(s) | 77 |
| HinfI | GANTC | 1 cut(s) | 143 |
| HpaII | CCGG | 1 cut(s) | 116 |
| Hpy188III | TCNNGA | 3 cut(s) | 79, 90, 129 |
| HpyCH4III | ACNGT | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 3 cut(s) | 17, 56, 73 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 77 |
| Kzo9I | GATC | 1 cut(s) | 92 |
| LpnPI | CCDG | 2 cut(s) | 125, 129 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MalI | GATC | 1 cut(s) | 94 |
| MboI | GATC | 1 cut(s) | 92 |
| MboII | GAAGA | 1 cut(s) | 26 |
| MluCI | AATT | 2 cut(s) | 46, 108 |
| MseI | TTAA | 1 cut(s) | 107 |
| MspI | CCGG | 1 cut(s) | 116 |
| MspR9I | CCNGG | 2 cut(s) | 117, 140 |
| Mva1269I | GAATGC | 1 cut(s) | 58 |
| MvaI | CCWGG | 1 cut(s) | 140 |
| NciI | CCSGG | 1 cut(s) | 117 |
| NdeII | GATC | 1 cut(s) | 92 |
| NlaIII | CATG | 1 cut(s) | 77 |
| NspI | RCATGY | 1 cut(s) | 77 |
| PctI | GAATGC | 1 cut(s) | 58 |
| PfeI | GAWTC | 1 cut(s) | 143 |
| PflFI | GACNNNGTC | 1 cut(s) | 85 |
| PfoI | TCCNGGA | 1 cut(s) | 138 |
| Psp6I | CCWGG | 1 cut(s) | 138 |
| PspGI | CCWGG | 1 cut(s) | 138 |
| PsyI | GACNNNGTC | 1 cut(s) | 85 |
| SaqAI | TTAA | 1 cut(s) | 107 |
| Sau3AI | GATC | 1 cut(s) | 92 |
| ScrFI | CCNGG | 2 cut(s) | 117, 140 |
| SgeI | CNNG | 7 cut(s) | 86, 91, 96, 102, 128, 129, 141 |
| Sse9I | AATT | 2 cut(s) | 46, 108 |
| SspMI | CTAG | 1 cut(s) | 90 |
| StyD4I | CCNGG | 2 cut(s) | 115, 138 |
| TaaI | ACNGT | 1 cut(s) | 87 |
| TaqI | TCGA | 1 cut(s) | 26 |
| TasI | AATT | 2 cut(s) | 46, 108 |
| TfiI | GAWTC | 1 cut(s) | 143 |
| Tru1I | TTAA | 1 cut(s) | 107 |
| Tru9I | TTAA | 1 cut(s) | 107 |
| Tth111I | GACNNNGTC | 1 cut(s) | 85 |
| XbaI | TCTAGA | 1 cut(s) | 89 |
| XceI | RCATGY | 1 cut(s) | 77 |
| XspI | CTAG | 1 cut(s) | 90 |