DYW family of nucleic acid deaminases
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0415431 RchiOBHm_Chr5g0040881 |
| rosa_multiflora | Rmu_ssc0000416.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00039820 Rroxscaffold_5G00359190 |
| rosa_rugosa | Rorug05G0188300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 285 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 38 |
| AccII | CGCG | 1 cut(s) | 161 |
| AcsI | RAATTY | 1 cut(s) | 139 |
| AfaI | GTAC | 3 cut(s) | 65, 93, 294 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AluBI | AGCT | 1 cut(s) | 328 |
| AluI | AGCT | 1 cut(s) | 328 |
| ApoI | RAATTY | 1 cut(s) | 139 |
| AspS9I | GGNCC | 1 cut(s) | 31 |
| AvaII | GGWCC | 1 cut(s) | 31 |
| BccI | CCATC | 2 cut(s) | 139, 152 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BmcAI | AGTACT | 1 cut(s) | 294 |
| Bme18I | GGWCC | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 1 cut(s) | 31 |
| BmiI | GGNNCC | 1 cut(s) | 33 |
| BmsI | GCATC | 2 cut(s) | 75, 142 |
| Bsh1236I | CGCG | 1 cut(s) | 161 |
| Bsp143I | GATC | 3 cut(s) | 25, 222, 312 |
| BspFNI | CGCG | 1 cut(s) | 161 |
| BspLI | GGNNCC | 1 cut(s) | 33 |
| BssMI | GATC | 3 cut(s) | 25, 222, 312 |
| Bst4CI | ACNGT | 1 cut(s) | 7 |
| Bst6I | CTCTTC | 1 cut(s) | 20 |
| BstFNI | CGCG | 1 cut(s) | 161 |
| BstKTI | GATC | 3 cut(s) | 28, 225, 315 |
| BstMBI | GATC | 3 cut(s) | 25, 222, 312 |
| BstNSI | RCATGY | 1 cut(s) | 64 |
| BstUI | CGCG | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 1 cut(s) | 31 |
| Csp6I | GTAC | 3 cut(s) | 64, 92, 293 |
| CviAII | CATG | 1 cut(s) | 61 |
| CviJI | RGCY | 2 cut(s) | 71, 328 |
| CviKI_1 | RGCY | 2 cut(s) | 71, 328 |
| CviQI | GTAC | 3 cut(s) | 64, 92, 293 |
| DpnI | GATC | 3 cut(s) | 27, 224, 314 |
| DpnII | GATC | 3 cut(s) | 25, 222, 312 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 38 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 38 |
| Eam1104I | CTCTTC | 1 cut(s) | 20 |
| EarI | CTCTTC | 1 cut(s) | 20 |
| Eco47I | GGWCC | 1 cut(s) | 31 |
| EcoO109I | RGGNCCY | 1 cut(s) | 31 |
| EcoRI | GAATTC | 1 cut(s) | 139 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| FaeI | CATG | 1 cut(s) | 64 |
| FaiI | YATR | 8 cut(s) | 62, 149, 157, 239, 252, 265, 285, 317 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 317 |
| FatI | CATG | 1 cut(s) | 60 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| Hin1II | CATG | 1 cut(s) | 64 |
| HindIII | AAGCTT | 1 cut(s) | 326 |
| HinfI | GANTC | 2 cut(s) | 304, 320 |
| Hpy188III | TCNNGA | 1 cut(s) | 29 |
| HpyCH4III | ACNGT | 1 cut(s) | 7 |
| HpyCH4IV | ACGT | 1 cut(s) | 273 |
| HpyCH4V | TGCA | 1 cut(s) | 155 |
| HpySE526I | ACGT | 1 cut(s) | 273 |
| Hsp92II | CATG | 1 cut(s) | 64 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| Kzo9I | GATC | 3 cut(s) | 25, 222, 312 |
| LpnPI | CCDG | 3 cut(s) | 4, 14, 135 |
| LweI | GCATC | 2 cut(s) | 75, 142 |
| MaeII | ACGT | 1 cut(s) | 273 |
| MalI | GATC | 3 cut(s) | 27, 224, 314 |
| MboI | GATC | 3 cut(s) | 25, 222, 312 |
| MboII | GAAGA | 1 cut(s) | 7 |
| MluCI | AATT | 3 cut(s) | 79, 111, 139 |
| MnlI | CCTC | 2 cut(s) | 58, 184 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MseI | TTAA | 2 cut(s) | 114, 340 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| MvnI | CGCG | 1 cut(s) | 161 |
| NdeII | GATC | 3 cut(s) | 25, 222, 312 |
| NlaIII | CATG | 1 cut(s) | 64 |
| NlaIV | GGNNCC | 1 cut(s) | 33 |
| NmeAIII | GCCGAG | 1 cut(s) | 47 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| NspI | RCATGY | 1 cut(s) | 64 |
| PciI | ACATGT | 1 cut(s) | 60 |
| PfeI | GAWTC | 2 cut(s) | 304, 320 |
| PpuMI | RGGWCCY | 1 cut(s) | 31 |
| PscI | ACATGT | 1 cut(s) | 60 |
| PsiI | TTATAA | 1 cut(s) | 285 |
| Psp5II | RGGWCCY | 1 cut(s) | 31 |
| PspN4I | GGNNCC | 1 cut(s) | 33 |
| PspPI | GGNCC | 1 cut(s) | 31 |
| PspPPI | RGGWCCY | 1 cut(s) | 31 |
| RsaI | GTAC | 3 cut(s) | 65, 93, 294 |
| RsaNI | GTAC | 3 cut(s) | 64, 92, 293 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SaqAI | TTAA | 2 cut(s) | 114, 340 |
| Sau3AI | GATC | 3 cut(s) | 25, 222, 312 |
| Sau96I | GGNCC | 1 cut(s) | 31 |
| ScaI | AGTACT | 1 cut(s) | 294 |
| SetI | ASST | 7 cut(s) | 23, 50, 195, 249, 262, 276, 330 |
| SfaNI | GCATC | 2 cut(s) | 75, 142 |
| SinI | GGWCC | 1 cut(s) | 31 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| Sse9I | AATT | 3 cut(s) | 79, 111, 139 |
| TaaI | ACNGT | 1 cut(s) | 7 |
| TaiI | ACGT | 1 cut(s) | 276 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 3 cut(s) | 79, 111, 139 |
| TatI | WGTACW | 2 cut(s) | 63, 292 |
| TfiI | GAWTC | 2 cut(s) | 304, 320 |
| Tru1I | TTAA | 2 cut(s) | 114, 340 |
| Tru9I | TTAA | 2 cut(s) | 114, 340 |
| TspDTI | ATGAA | 2 cut(s) | 123, 216 |
| VpaK11BI | GGWCC | 1 cut(s) | 31 |
| XapI | RAATTY | 1 cut(s) | 139 |
| XceI | RCATGY | 1 cut(s) | 64 |
| ZrmI | AGTACT | 1 cut(s) | 294 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |