Belongs to the peroxidase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0251981 RchiOBHm_Chr6g0252121 RchiOBHm_Chr6g0252131 |
| rosa_multiflora | Rmu_sc0002522.1_g000007 |
| rosa_samantha | Rh6AG019500 Rh6BG015000 |
| rosa_wichuraiana | Rw6G000060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 242 |
| AclWI | GGATC | 3 cut(s) | 70, 130, 358 |
| AcsI | RAATTY | 1 cut(s) | 114 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 92 |
| AflIII | ACRYGT | 2 cut(s) | 29, 155 |
| AgsI | TTSAA | 2 cut(s) | 232, 282 |
| AjnI | CCWGG | 1 cut(s) | 366 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 318, 350 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 126, 158 |
| AluBI | AGCT | 1 cut(s) | 268 |
| AluI | AGCT | 1 cut(s) | 268 |
| AlwI | GGATC | 3 cut(s) | 70, 130, 358 |
| ApeKI | GCWGC | 1 cut(s) | 353 |
| ApoI | RAATTY | 1 cut(s) | 114 |
| BbvI | GCAGC | 1 cut(s) | 340 |
| BccI | CCATC | 2 cut(s) | 32, 124 |
| BceAI | ACGGC | 1 cut(s) | 118 |
| BciT130I | CCWGG | 1 cut(s) | 368 |
| BglII | AGATCT | 1 cut(s) | 197 |
| BisI | GCNGC | 1 cut(s) | 354 |
| BlsI | GCNGC | 1 cut(s) | 355 |
| Bme1390I | CCNGG | 1 cut(s) | 368 |
| BmrFI | CCNGG | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 2 cut(s) | 57, 367 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 330, 360 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 92 |
| Bse1I | ACTGG | 1 cut(s) | 324 |
| BseBI | CCWGG | 1 cut(s) | 368 |
| BseDI | CCNNGG | 2 cut(s) | 57, 367 |
| BseGI | GGATG | 3 cut(s) | 20, 43, 220 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseMII | CTCAG | 1 cut(s) | 255 |
| BseNI | ACTGG | 1 cut(s) | 324 |
| BseRI | GAGGAG | 1 cut(s) | 233 |
| BseXI | GCAGC | 1 cut(s) | 340 |
| BsgI | GTGCAG | 1 cut(s) | 351 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 92 |
| Bsp143I | GATC | 4 cut(s) | 62, 122, 197, 363 |
| Bsp19I | CCATGG | 1 cut(s) | 57 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BspPI | GGATC | 3 cut(s) | 70, 130, 358 |
| BsrI | ACTGG | 1 cut(s) | 324 |
| BssECI | CCNNGG | 2 cut(s) | 57, 367 |
| BssMI | GATC | 4 cut(s) | 62, 122, 197, 363 |
| BssT1I | CCWWGG | 1 cut(s) | 57 |
| Bst2UI | CCWGG | 1 cut(s) | 368 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 142 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 329, 350 |
| BstDEI | CTNAG | 2 cut(s) | 194, 264 |
| BstDSI | CCRYGG | 1 cut(s) | 57 |
| BstF5I | GGATG | 3 cut(s) | 20, 43, 220 |
| BstKTI | GATC | 4 cut(s) | 65, 125, 200, 366 |
| BstMBI | GATC | 4 cut(s) | 62, 122, 197, 363 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 329, 350 |
| BstNI | CCWGG | 1 cut(s) | 368 |
| BstNSI | RCATGY | 2 cut(s) | 33, 159 |
| BstSCI | CCNGG | 1 cut(s) | 366 |
| BstV1I | GCAGC | 1 cut(s) | 340 |
| BstX2I | RGATCY | 2 cut(s) | 62, 197 |
| BstYI | RGATCY | 2 cut(s) | 62, 197 |
| BtgI | CCRYGG | 1 cut(s) | 57 |
| BtsCI | GGATG | 3 cut(s) | 20, 43, 220 |
| CviAII | CATG | 3 cut(s) | 30, 58, 156 |
| CviJI | RGCY | 2 cut(s) | 268, 372 |
| CviKI_1 | RGCY | 2 cut(s) | 268, 372 |
| DdeI | CTNAG | 2 cut(s) | 194, 264 |
| DpnI | GATC | 4 cut(s) | 64, 124, 199, 365 |
| DpnII | GATC | 4 cut(s) | 62, 122, 197, 363 |
| Eco130I | CCWWGG | 1 cut(s) | 57 |
| EcoRII | CCWGG | 1 cut(s) | 366 |
| EcoT14I | CCWWGG | 1 cut(s) | 57 |
| ErhI | CCWWGG | 1 cut(s) | 57 |
| FaeI | CATG | 3 cut(s) | 33, 61, 159 |
| FatI | CATG | 3 cut(s) | 29, 57, 155 |
| Fnu4HI | GCNGC | 1 cut(s) | 354 |
| FokI | GGATG | 3 cut(s) | 27, 50, 227 |
| Fsp4HI | GCNGC | 1 cut(s) | 354 |
| GluI | GCNGC | 1 cut(s) | 354 |
| Hin1II | CATG | 3 cut(s) | 33, 61, 159 |
| HinfI | GANTC | 2 cut(s) | 97, 245 |
| Hpy166II | GTNNAC | 2 cut(s) | 83, 276 |
| Hpy188I | TCNGA | 3 cut(s) | 127, 147, 265 |
| Hpy188III | TCNNGA | 1 cut(s) | 66 |
| Hpy8I | GTNNAC | 2 cut(s) | 83, 276 |
| HpyAV | CCTTC | 1 cut(s) | 320 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 142 |
| HpyCH4V | TGCA | 3 cut(s) | 302, 332, 344 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 329, 350 |
| HpyF3I | CTNAG | 2 cut(s) | 194, 264 |
| Hsp92II | CATG | 3 cut(s) | 33, 61, 159 |
| Kzo9I | GATC | 4 cut(s) | 62, 122, 197, 363 |
| LpnPI | CCDG | 6 cut(s) | 51, 91, 197, 305, 353, 380 |
| Lsp1109I | GCAGC | 1 cut(s) | 340 |
| MaeIII | GTNAC | 2 cut(s) | 17, 23 |
| MalI | GATC | 4 cut(s) | 64, 124, 199, 365 |
| MboI | GATC | 4 cut(s) | 62, 122, 197, 363 |
| MflI | RGATCY | 2 cut(s) | 62, 197 |
| MluCI | AATT | 1 cut(s) | 114 |
| MmeI | TCCRAC | 1 cut(s) | 316 |
| MnlI | CCTC | 4 cut(s) | 96, 211, 214, 298 |
| MspR9I | CCNGG | 1 cut(s) | 368 |
| MvaI | CCWGG | 1 cut(s) | 368 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 329, 350 |
| NcoI | CCATGG | 1 cut(s) | 57 |
| NdeII | GATC | 4 cut(s) | 62, 122, 197, 363 |
| NlaIII | CATG | 3 cut(s) | 33, 61, 159 |
| NmuCI | GTSAC | 2 cut(s) | 17, 23 |
| NspI | RCATGY | 2 cut(s) | 33, 159 |
| PciI | ACATGT | 2 cut(s) | 29, 155 |
| PfeI | GAWTC | 2 cut(s) | 97, 245 |
| PkrI | GCNGC | 1 cut(s) | 355 |
| PscI | ACATGT | 2 cut(s) | 29, 155 |
| Psp6I | CCWGG | 1 cut(s) | 366 |
| PspGI | CCWGG | 1 cut(s) | 366 |
| PsuI | RGATCY | 2 cut(s) | 62, 197 |
| SatI | GCNGC | 1 cut(s) | 354 |
| Sau3AI | GATC | 4 cut(s) | 62, 122, 197, 363 |
| ScrFI | CCNGG | 1 cut(s) | 368 |
| SetI | ASST | 3 cut(s) | 88, 270, 331 |
| Sse9I | AATT | 1 cut(s) | 114 |
| SsiI | CCGC | 1 cut(s) | 242 |
| StyD4I | CCNGG | 1 cut(s) | 366 |
| StyI | CCWWGG | 1 cut(s) | 57 |
| TaaI | ACNGT | 2 cut(s) | 23, 142 |
| TasI | AATT | 1 cut(s) | 114 |
| TfiI | GAWTC | 2 cut(s) | 97, 245 |
| TseFI | GTSAC | 2 cut(s) | 17, 23 |
| TseI | GCWGC | 1 cut(s) | 353 |
| Tsp45I | GTSAC | 2 cut(s) | 17, 23 |
| TspDTI | ATGAA | 1 cut(s) | 396 |
| XapI | RAATTY | 1 cut(s) | 114 |
| XceI | RCATGY | 2 cut(s) | 33, 159 |