RchiOBHm_Chr6g0262421

C2H2-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0017239
Physical Location & Seq
Forward (+)
17172787 .. 17174265
1479 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23533

Sequence Viewer

Length: 1479 bp
ATGCCAACTCCGCCGGAGGCTTTAGAGCAAGCCCAGCACCGTGAAGTTTCTCCTCCATTGAATCACATATGTGATATTTGCCACAAGGGATTTCGGTCCGGCCAAGCCTTGGGAGGTCACAAGAGTATGCACTTTCGCGAGAGCGAGGCCATCATCACTAGTGCTACTACCAGTACCAGTGATCCAATTTGTTGTCTCGTTTGTGGGAAGAACTTCCTCTCCAAGAAATCGCTGTTTCGACACCTGAGGTCACACACTGGAAACCTGTCCCCTCGGGCGGGCTATAACAGCGGCAACTCTTCTTCCACTGTGTCAGATGAGCCTACGTTTGATGATGGCAAATGTGATGGGGTTGATTCGGGTTCGCGTTTTGATCTGTCCAAGACTCTACCTGCAGGTTGGTCTATCACTAGAAGGAGGAAAAGGAATGCCCTTGGTACCTCAGCCTCTGATTGCTCTGGCTCTGATGAAACTGCTGGCAACTCGGGGTTGGATTTGAGTCCCAAGTTGGAATTAGTAACTGTTGATCCGAAACTAGAAGCGGAGGAGTTCAGTGGTCTTGTGATGCTGGCTCAGGTCTGTGCCGAGGAGGCTAGTCGCAGAAATTTGATTAATAATAACCAGGTTTATCAGAATGGTCAGATCGAAATCAGGTATGTTGCAATCGAATGCAAGAGGAGGCGGCTGAATGATGGGTATGAAAGAAGATGGTCTGCAGCTGATCATTATGGTTACAATTGCAATGACATTGATTCTGATTTTAGATGCAAGCTTTGCAATAAAACATTCACAAGTTACCAAGCTTTGGGAGGTCACATGTCAAGCCATTACCGGCTCAAGATCAACTCAAAGGATCATGATCATGCCCAATTTAACTTCGAACAACACAATGAACAACATTCTCTTCTTCCTCAAGTGGTTAGCACATACAGCTGCAATGTTTGCGATAAAACATTCTCAGGTTACCAAGCCTTGGGAGCGCACATCTTAAGCCATTGCAAGGATGTGAACGACAACAACACGCACAATTCAGCACATAACAGGGTTATTAAAGATAACAATGTGCCTGAGCCTCGTCAAGTTGAATTGCACAGTTGCGGTGTTTGCAATAAAGAATTCACAAGTTACCAAGCTTTGGGAGGACACAAGTCAAGCCATACGAAGTACAATAACAACAATAATATGGATCGAGATCAATCTAATTCTGATATATCAACCGGTGGTGCTGAAGATAAGAATGAACGTCAAAAACTCTATGTAACAGTACCTCACCAATGCGAAGAATGCAAGAAGACTTTTCCAACAGGTCAGGCTTTGGGGGGTCATAAGAGGCTTCATTGGAAGGGCCCAACTGGAGCTACAGCGAAACCGAGTCAGCAGAGTAGTGCTCGTAGGCCGCTTGAATTTGACCTCAATGAGATTCCATCTATGGAGGATGAAGATGAAATAAATGTGCCGAGCGTCCTCTTGCAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_6

Protein Analysis

492

Amino Acids

54.69

Weight (kDa)

6.66

Isoelectric Point (pI)

58.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 22 - 44 1.8e-08 C2H2-type zinc finger
zf-C2H2_6 PF13912 254 - 278 3.4e-11 C2H2-type zinc finger
zf-C2H2_6 PF13912 364 - 387 9.3e-09 C2H2-type zinc finger
zf-C2H2_6 PF13912 424 - 448 3.2e-09 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g07960 FvH4_2g07970
rosa_chinensis RchiOBHm_Chr6g0262421
rosa_laevigata RLG00000014430
rosa_multiflora Rmu_sc0022687.1_g000001 Rmu_sc0022688.1_g000001
rosa_roxburghii Rroxscaffold_7G00205290
rosa_rugosa Rorug05G0597100
rosa_samantha Rh6AG117900 Rh6BG111900 Rh6CG109900 Rh6DG099500
rosa_wichuraiana Rw6G010230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1477
Acc36I ACCTGC 2 cut(s) 386, 400
Acc65I GGTACC 1 cut(s) 437
AccB1I GGYRCC 1 cut(s) 437
AccB7I CCANNNNNTGG 4 cut(s) 109, 805, 973, 1135
AccII CGCG 2 cut(s) 138, 367
AciI CCGC 7 cut(s) 11, 278, 291, 542, 682, 1098, 1397
AclWI GGATC 4 cut(s) 176, 521, 861, 1194
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 3 cut(s) 604, 1115, 1403
AcuI CTGAAG 1 cut(s) 1248
AfaI GTAC 4 cut(s) 175, 439, 1166, 1266
AfiI CCNNNNNNNGG 7 cut(s) 109, 277, 278, 805, 973, 1000, 1135
AflII CTTAAG 1 cut(s) 988
AflIII ACRYGT 1 cut(s) 816
AgeI ACCGGT 1 cut(s) 1217
AgsI TTSAA 3 cut(s) 61, 1085, 1403
AhlI ACTAGT 1 cut(s) 158
AjnI CCWGG 1 cut(s) 621
AleI CACNNNNGTG 1 cut(s) 69
AloI GAACNNNNNNTCC 2 cut(s) 203, 235
AluBI AGCT 6 cut(s) 719, 772, 803, 933, 1133, 1358
AluI AGCT 6 cut(s) 719, 772, 803, 933, 1133, 1358
Alw21I GWGCWC 1 cut(s) 1390
Alw26I GTCTC 1 cut(s) 200
AlwI GGATC 4 cut(s) 176, 521, 861, 1194
AlwNI CAGNNNCTG 1 cut(s) 449
Ama87I CYCGRG 2 cut(s) 273, 484
AoxI GGCC 4 cut(s) 100, 147, 1345, 1394
ApaI GGGCCC 1 cut(s) 1349
ApeKI GCWGC 2 cut(s) 716, 933
ApoI RAATTY 3 cut(s) 604, 1115, 1403
AseI ATTAAT 1 cut(s) 612
AsiGI ACCGGT 1 cut(s) 1217
Asp700I GAANNNNTTC 1 cut(s) 212
Asp718I GGTACC 1 cut(s) 437
AspLEI GCGC 1 cut(s) 982
AspS9I GGNCC 3 cut(s) 96, 1345, 1346
AsuHPI GGTGA 1 cut(s) 1262
AsuII TTCGAA 1 cut(s) 879
AvaI CYCGRG 2 cut(s) 273, 484
AvaII GGWCC 1 cut(s) 96
AxyI CCTNAGG 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 1349
BanI GGYRCC 1 cut(s) 437
BanII GRGCYC 1 cut(s) 1349
BbsI GAAGAC 1 cut(s) 1298
Bbv12I GWGCWC 1 cut(s) 1390
BbvCI CCTCAGC 1 cut(s) 442
BbvI GCAGC 2 cut(s) 728, 920
BccI CCATC 6 cut(s) 158, 329, 341, 686, 702, 1432
BciT130I CCWGG 1 cut(s) 623
BclI TGATCA 2 cut(s) 721, 859
BcoDI GTCTC 1 cut(s) 200
BcuI ACTAGT 1 cut(s) 158
BfaI CTAG 4 cut(s) 159, 411, 536, 594
BfmI CTRYAG 3 cut(s) 393, 714, 1359
BfrI CTTAAG 1 cut(s) 988
BfuAI ACCTGC 2 cut(s) 386, 400
BglI GCCNNNNNGGC 1 cut(s) 590
BisI GCNGC 5 cut(s) 292, 683, 717, 934, 1397
BlsI GCNGC 5 cut(s) 293, 684, 718, 935, 1398
Bme1390I CCNGG 1 cut(s) 623
Bme18I GGWCC 1 cut(s) 96
BmeT110I CYCGRG 2 cut(s) 273, 484
BmgT120I GGNCC 3 cut(s) 96, 1345, 1346
BmiI GGNNCC 2 cut(s) 439, 1347
BmrFI CCNGG 1 cut(s) 623
BmsI GCATC 2 cut(s) 555, 755
BoxI GACNNNNGTC 1 cut(s) 1147
BpiI GAAGAC 1 cut(s) 1298
BplI GAGNNNNNCTC 2 cut(s) 1372, 1404
BpmI CTGGAG 1 cut(s) 1374
Bpu10I CCTNAGC 3 cut(s) 442, 573, 1068
Bpu14I TTCGAA 1 cut(s) 879
BpuEI CTTGAG 2 cut(s) 821, 897
BsaBI GATNNNNATC 3 cut(s) 647, 858, 1191
BsaJI CCNNGG 5 cut(s) 108, 272, 433, 585, 972
BsaWI WCCGGW 1 cut(s) 1217
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 7 cut(s) 109, 277, 278, 805, 973, 1000, 1135
Bse118I RCCGGY 2 cut(s) 831, 1217
Bse1I ACTGG 4 cut(s) 171, 177, 262, 1357
Bse21I CCTNAGG 1 cut(s) 245
Bse3DI GCAATG 3 cut(s) 748, 943, 994
Bse8I GATNNNNATC 3 cut(s) 647, 858, 1191
BseBI CCWGG 1 cut(s) 623
BseDI CCNNGG 5 cut(s) 108, 272, 433, 585, 972
BseGI GGATG 2 cut(s) 1009, 1441
BseJI GATNNNNATC 3 cut(s) 647, 858, 1191
BseLI CCNNNNNNNGG 7 cut(s) 109, 277, 278, 805, 973, 1000, 1135
BseMI GCAATG 3 cut(s) 748, 943, 994
BseMII CTCAG 5 cut(s) 236, 456, 587, 972, 1059
BseNI ACTGG 4 cut(s) 171, 177, 262, 1357
BseRI GAGGAG 4 cut(s) 42, 560, 602, 691
BseSI GKGCMC 1 cut(s) 1349
BseXI GCAGC 2 cut(s) 728, 920
BseYI CCCAGC 1 cut(s) 33
Bsh1236I CGCG 2 cut(s) 138, 367
BshFI GGCC 4 cut(s) 102, 149, 1347, 1396
BshNI GGYRCC 1 cut(s) 437
BshTI ACCGGT 1 cut(s) 1217
BsiHKAI GWGCWC 1 cut(s) 1390
BsiHKCI CYCGRG 2 cut(s) 273, 484
BsiSI CCGG 4 cut(s) 14, 99, 832, 1218
BslFI GGGAC 2 cut(s) 253, 486
BslI CCNNNNNNNGG 7 cut(s) 109, 277, 278, 805, 973, 1000, 1135
BsmAI GTCTC 1 cut(s) 200
BsmFI GGGAC 2 cut(s) 253, 486
BsmI GAATGC 3 cut(s) 433, 674, 1289
BsnI GGCC 4 cut(s) 102, 149, 1347, 1396
BsoBI CYCGRG 2 cut(s) 273, 484
Bsp119I TTCGAA 1 cut(s) 879
Bsp120I GGGCCC 1 cut(s) 1345
Bsp1286I GDGCHC 2 cut(s) 1349, 1390
Bsp68I TCGCGA 1 cut(s) 138
BspACI CCGC 7 cut(s) 11, 278, 291, 542, 682, 1098, 1397
BspANI GGCC 4 cut(s) 102, 149, 1347, 1396
BspCNI CTCAG 5 cut(s) 237, 455, 586, 971, 1060
BspFNI CGCG 2 cut(s) 138, 367
BspHI TCATGA 1 cut(s) 856
BspLI GGNNCC 2 cut(s) 439, 1347
BspMAI CTGCAG 2 cut(s) 397, 718
BspMI ACCTGC 2 cut(s) 386, 400
BspPI GGATC 4 cut(s) 176, 521, 861, 1194
BspT104I TTCGAA 1 cut(s) 879
BspT107I GGYRCC 1 cut(s) 437
BspTI CTTAAG 1 cut(s) 988
BsrDI GCAATG 3 cut(s) 748, 943, 994
BsrFI RCCGGY 2 cut(s) 831, 1217
BsrI ACTGG 4 cut(s) 171, 177, 262, 1357
BssAI RCCGGY 2 cut(s) 831, 1217
BssECI CCNNGG 5 cut(s) 108, 272, 433, 585, 972
BssT1I CCWWGG 3 cut(s) 108, 433, 972
Bst2UI CCWGG 1 cut(s) 623
Bst4CI ACNGT 5 cut(s) 41, 310, 523, 1094, 1264
Bst6I CTCTTC 2 cut(s) 304, 909
BstAFI CTTAAG 1 cut(s) 988
BstAPI GCANNNNNTGC 2 cut(s) 774, 942
BstBI TTCGAA 1 cut(s) 879
BstC8I GCNNGC 5 cut(s) 30, 280, 478, 570, 770
BstDEI CTNAG 5 cut(s) 245, 442, 573, 958, 1068
BstEII GGTNACC 1 cut(s) 962
BstF5I GGATG 2 cut(s) 1009, 1441
BstFNI CGCG 2 cut(s) 138, 367
BstHHI GCGC 1 cut(s) 982
BstMAI GTCTC 1 cut(s) 200
BstNI CCWGG 1 cut(s) 623
BstNSI RCATGY 1 cut(s) 820
BstPAI GACNNNNGTC 1 cut(s) 1147
BstPI GGTNACC 1 cut(s) 962
BstSCI CCNGG 1 cut(s) 621
BstSFI CTRYAG 3 cut(s) 393, 714, 1359
BstSLI GKGCMC 1 cut(s) 1349
BstUI CGCG 2 cut(s) 138, 367
BstV1I GCAGC 2 cut(s) 728, 920
BstV2I GAAGAC 1 cut(s) 1298
Bsu36I CCTNAGG 1 cut(s) 245
BsuRI GGCC 4 cut(s) 102, 149, 1347, 1396
BtsCI GGATG 2 cut(s) 1009, 1441
BtsIMutI CAGTG 4 cut(s) 184, 255, 306, 559
BtuMI TCGCGA 1 cut(s) 138
BveI ACCTGC 2 cut(s) 386, 400
Cac8I GCNNGC 5 cut(s) 30, 280, 478, 570, 770
CaiI CAGNNNCTG 1 cut(s) 449
CciI TCATGA 1 cut(s) 856
CfoI GCGC 1 cut(s) 982
Cfr10I RCCGGY 2 cut(s) 831, 1217
Cfr13I GGNCC 3 cut(s) 96, 1345, 1346
CpoI CGGWCCG 1 cut(s) 96
CseI GACGC 1 cut(s) 1450
CsiI ACCWGGT 1 cut(s) 621
Csp6I GTAC 4 cut(s) 174, 438, 1165, 1265
CspAI ACCGGT 1 cut(s) 1217
CspI CGGWCCG 1 cut(s) 96
CviAII CATG 3 cut(s) 817, 857, 863
CviQI GTAC 4 cut(s) 174, 438, 1165, 1265
DdeI CTNAG 5 cut(s) 245, 442, 573, 958, 1068
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 2 cut(s) 304, 909
EarI CTCTTC 2 cut(s) 304, 909
Eco130I CCWWGG 3 cut(s) 108, 433, 972
Eco24I GRGCYC 1 cut(s) 1349
Eco47I GGWCC 1 cut(s) 96
Eco57I CTGAAG 1 cut(s) 1248
Eco81I CCTNAGG 1 cut(s) 245
Eco88I CYCGRG 2 cut(s) 273, 484
Eco91I GGTNACC 1 cut(s) 962
EcoO109I RGGNCCY 1 cut(s) 1345
EcoO65I GGTNACC 1 cut(s) 962
EcoRI GAATTC 1 cut(s) 1115
EcoRII CCWGG 1 cut(s) 621
EcoT14I CCWWGG 3 cut(s) 108, 433, 972
EcoT38I GRGCYC 1 cut(s) 1349
ErhI CCWWGG 3 cut(s) 108, 433, 972
FaeI CATG 3 cut(s) 820, 860, 866
FaqI GGGAC 2 cut(s) 253, 486
FatI CATG 3 cut(s) 816, 856, 862
FauI CCCGC 1 cut(s) 271
FauNDI CATATG 1 cut(s) 68
FbaI TGATCA 2 cut(s) 721, 859
Fnu4HI GCNGC 5 cut(s) 292, 683, 717, 934, 1397
FokI GGATG 2 cut(s) 1016, 1448
FriOI GRGCYC 1 cut(s) 1349
Fsp4HI GCNGC 5 cut(s) 292, 683, 717, 934, 1397
FspBI CTAG 4 cut(s) 159, 411, 536, 594
GlaI GCGC 1 cut(s) 981
GluI GCNGC 5 cut(s) 292, 683, 717, 934, 1397
GsaI CCCAGC 1 cut(s) 37
GsuI CTGGAG 1 cut(s) 1374
HaeIII GGCC 4 cut(s) 102, 149, 1347, 1396
HapII CCGG 4 cut(s) 14, 99, 832, 1218
HgaI GACGC 1 cut(s) 1450
HhaI GCGC 1 cut(s) 982
Hin1II CATG 3 cut(s) 820, 860, 866
Hin6I GCGC 1 cut(s) 980
HinP1I GCGC 1 cut(s) 980
HindIII AAGCTT 3 cut(s) 770, 801, 1131
HinfI GANTC 7 cut(s) 61, 356, 385, 499, 752, 1372, 1420
HpaII CCGG 4 cut(s) 14, 99, 832, 1218
HphI GGTGA 1 cut(s) 1262
Hpy166II GTNNAC 1 cut(s) 1009
Hpy188I TCNGA 8 cut(s) 316, 451, 466, 531, 633, 642, 757, 1207
Hpy188III TCNNGA 4 cut(s) 137, 838, 857, 1190
Hpy8I GTNNAC 1 cut(s) 1009
HpyAV CCTTC 2 cut(s) 408, 1336
HpyCH4III ACNGT 5 cut(s) 41, 310, 523, 1094, 1264
HpyCH4IV ACGT 2 cut(s) 326, 1243
HpyF3I CTNAG 5 cut(s) 245, 442, 573, 958, 1068
HpySE526I ACGT 2 cut(s) 326, 1243
Hsp92II CATG 3 cut(s) 820, 860, 866
HspAI GCGC 1 cut(s) 980
KpnI GGTACC 1 cut(s) 441
Ksp22I TGATCA 2 cut(s) 721, 859
LmnI GCTCC 2 cut(s) 977, 1355
Lsp1109I GCAGC 2 cut(s) 728, 920
LweI GCATC 2 cut(s) 555, 755
MabI ACCWGGT 1 cut(s) 621
MaeI CTAG 4 cut(s) 159, 411, 536, 594
MaeII ACGT 2 cut(s) 326, 1243
MaeIII GTNAC 9 cut(s) 116, 249, 517, 731, 794, 812, 962, 1124, 1258
MfeI CAATTG 1 cut(s) 736
MhlI GDGCHC 2 cut(s) 1349, 1390
MlyI GAGTC 3 cut(s) 379, 508, 1381
MmeI TCCRAC 3 cut(s) 471, 489, 1325
MroXI GAANNNNTTC 1 cut(s) 212
MseI TTAA 4 cut(s) 612, 873, 989, 1050
MslI CAYNNNNRTG 2 cut(s) 69, 861
MspA1I CMGCKG 3 cut(s) 291, 719, 933
MspCI CTTAAG 1 cut(s) 988
MspI CCGG 4 cut(s) 14, 99, 832, 1218
MspR9I CCNGG 1 cut(s) 623
MunI CAATTG 1 cut(s) 736
Mva1269I GAATGC 3 cut(s) 433, 674, 1289
MvaI CCWGG 1 cut(s) 623
MvnI CGCG 2 cut(s) 138, 367
NdeI CATATG 1 cut(s) 68
NlaIII CATG 3 cut(s) 820, 860, 866
NlaIV GGNNCC 2 cut(s) 439, 1347
NmeAIII GCCGAG 1 cut(s) 610
NmuCI GTSAC 3 cut(s) 116, 249, 812
NruI TCGCGA 1 cut(s) 138
NspI RCATGY 1 cut(s) 820
NspV TTCGAA 1 cut(s) 879
OliI CACNNNNGTG 1 cut(s) 69
PagI TCATGA 1 cut(s) 856
PciI ACATGT 1 cut(s) 816
PctI GAATGC 3 cut(s) 433, 674, 1289
PdmI GAANNNNTTC 1 cut(s) 212
PfeI GAWTC 4 cut(s) 61, 356, 752, 1420
PflMI CCANNNNNTGG 4 cut(s) 109, 805, 973, 1135
PinAI ACCGGT 1 cut(s) 1217
PkrI GCNGC 5 cut(s) 293, 684, 718, 935, 1398
PleI GAGTC 3 cut(s) 379, 507, 1380
PpsI GAGTC 3 cut(s) 379, 507, 1380
PscI ACATGT 1 cut(s) 816
PshAI GACNNNNGTC 1 cut(s) 1147
PshBI ATTAAT 1 cut(s) 612
PsiI TTATAA 1 cut(s) 1477
Psp6I CCWGG 1 cut(s) 621
PspEI GGTNACC 1 cut(s) 962
PspFI CCCAGC 1 cut(s) 33
PspGI CCWGG 1 cut(s) 621
PspN4I GGNNCC 2 cut(s) 439, 1347
PspOMI GGGCCC 1 cut(s) 1345
PspPI GGNCC 3 cut(s) 96, 1345, 1346
PstI CTGCAG 2 cut(s) 397, 718
PstNI CAGNNNCTG 1 cut(s) 449
PvuII CAGCTG 2 cut(s) 719, 933
RruI TCGCGA 1 cut(s) 138
RsaI GTAC 4 cut(s) 175, 439, 1166, 1266
RsaNI GTAC 4 cut(s) 174, 438, 1165, 1265
RseI CAYNNNNRTG 2 cut(s) 69, 861
Rsr2I CGGWCCG 1 cut(s) 96
RsrII CGGWCCG 1 cut(s) 96
SaqAI TTAA 4 cut(s) 612, 873, 989, 1050
SatI GCNGC 5 cut(s) 292, 683, 717, 934, 1397
Sau96I GGNCC 3 cut(s) 96, 1345, 1346
SbfI CCTGCAGG 1 cut(s) 397
SchI GAGTC 3 cut(s) 379, 508, 1381
ScrFI CCNGG 1 cut(s) 623
SdaI CCTGCAGG 1 cut(s) 397
SduI GDGCHC 2 cut(s) 1349, 1390
SexAI ACCWGGT 1 cut(s) 621
SfaNI GCATC 2 cut(s) 555, 755
SfcI CTRYAG 3 cut(s) 393, 714, 1359
SfuI TTCGAA 1 cut(s) 879
SinI GGWCC 1 cut(s) 96
SmiMI CAYNNNNRTG 2 cut(s) 69, 861
SmlI CTYRAG 3 cut(s) 836, 912, 988
SmoI CTYRAG 3 cut(s) 836, 912, 988
SpeI ACTAGT 1 cut(s) 158
Sse8387I CCTGCAGG 1 cut(s) 397
SsiI CCGC 7 cut(s) 11, 278, 291, 542, 682, 1098, 1397
SspMI CTAG 4 cut(s) 159, 411, 536, 594
StyD4I CCNGG 1 cut(s) 621
StyI CCWWGG 3 cut(s) 108, 433, 972
TaaI ACNGT 5 cut(s) 41, 310, 523, 1094, 1264
TaiI ACGT 2 cut(s) 329, 1246
TaqI TCGA 5 cut(s) 238, 645, 666, 879, 1189
TaqII GACCGA 1 cut(s) 84
TatI WGTACW 1 cut(s) 1164
TauI GCSGC 3 cut(s) 294, 685, 1399
TfiI GAWTC 4 cut(s) 61, 356, 752, 1420
Tru1I TTAA 4 cut(s) 612, 873, 989, 1050
Tru9I TTAA 4 cut(s) 612, 873, 989, 1050
TscAI CASTG 4 cut(s) 184, 262, 313, 559
TseFI GTSAC 3 cut(s) 116, 249, 812
TseI GCWGC 2 cut(s) 716, 933
Tsp45I GTSAC 3 cut(s) 116, 249, 812
TspDTI ATGAA 7 cut(s) 483, 714, 906, 1254, 1325, 1452, 1458
TspRI CASTG 4 cut(s) 184, 262, 313, 559
Van91I CCANNNNNTGG 4 cut(s) 109, 805, 973, 1135
Vha464I CTTAAG 1 cut(s) 988
VpaK11BI GGWCC 1 cut(s) 96
VspI ATTAAT 1 cut(s) 612
XapI RAATTY 3 cut(s) 604, 1115, 1403
XceI RCATGY 1 cut(s) 820
XmnI GAANNNNTTC 1 cut(s) 212
XspI CTAG 4 cut(s) 159, 411, 536, 594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.