Rroxscaffold_7G00205290

C2H2-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0017239
Physical Location & Seq
Reverse (-)
54857027 .. 54858574
1548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00205290.1

Sequence Viewer

Length: 1548 bp
ATGGATGCTGATCACAAAGAAACTCAGGTACTTCTTCCCAACTCCATTGATCTACAACAACCCACTAAGATGCCAACTCCGCCGGAGGCTTTAGAGCAAGCCCAGCACCGTGAAGTTTCTCCTCCATTGAATCACATATGTGATATTTGCCACAAGGGATTTCGGTCCGGCCAAGCCTTGGGAGGTCACAAGAGTATGCACTTTCGCGAGAGCGAGGCAATCACCAGTGCTACTACCAGTACCAGTGACCCAATTTGTTGTCTCGTTTGTGGGAAGAACTTCCTCTCCAAGAAATCGCTGTTTCGACACCTGAGGTCACACACTGGAAATCTGTCCCCTCGGGCGGGTTATAACAGCGGCAACTCTTCTTCCACTGTATCAGATGAGCCTACGTTTGATGATGGCAAATGTGATGGGGTTGATTCGGGTTCGCGTTTTGATCTGTCCAAGACTCTACCTGCAGGTTGGTCTATCACTAGAAAAAGGAAAAGAACAGCCCTTGGTACCTCAGCCTCTGACTGCTCTGGCTCTGATGAAACTGCTGGCAACTCGGGGTTGGATTCGAGTCCCAAGTTGGAATTAGTAACTGTTGATCCGAAACTGGAAGCGGAGGAGTTCAGTGGTCTTGTGATGCTGGCTCAGGTCTGTGCGGAGGAGGCTAGTCGCAGAAATTTGATTAATAATAACCAGGTTTATCATAATGGTCAGATCGAAATCAAGTATGTTGCAATCGAATGCAAGAGGAGGCGGCTCAATGATGGATATGAAAGAAGATGGTCTGCAGCTGATCATTATGGTTACAATTGCAATGACATTGATTCTGATTTTAGATGCAAGCTTTGCAATAAAACATTCACTAGTTACCAAGCTTTGGGAGGTCACATGTCAAGCCATTACCGGCTCAAGATCAACTCAAAGGATCATGATCATGCCCAATTTAACTTCGAACAACACAATGAACAACATCCTCTTCCTCCTCAAGTGGTTAGCACATACAGCTGCAATGTTTGCGATAAAACATTCTCAGGTTACCAAACCTTGGGAGCGCACATCTTAAGCCATTGCAAGGATGTGAACGACAACAACACCCACAACTCAGCAGATAACAGTGTTGTTAAAGATAACAATGTGCCTGAGCCTCGTCAAGTTGAATTGCACAGTTGCGGTGTTTGCAATAAAGAATTCACAAGTTACCAAGCTTTGGGAGGACACAAGTCAAGCCATACGAAGTACAATAACAACAATAATATGGATCGAGATCAATCTAATTCTGCGGATATATCAACCGGTCGTGCTGAAGATAAGAATGAACGTCAAAAACTCTATGTAACAGTACCTCACCAATGCGAAGAATGCAAGAAGACTTTTCCCACAGGTCAGGCTTTGGGGGGTCATAAGAGGCTTCATTGGAAGGGCCCAACTGGAGCGACAGCGAAACCGAGTCAGCAGAGTAGTGCTCGTAGGCCCCTTGAATTTGACCTCAATGAGATTCCATCTATGGAGGATGAAGATGAAATAAATGTGCCGAGCGTCCTCTTGCAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_6

Protein Analysis

515

Amino Acids

57.18

Weight (kDa)

6.41

Isoelectric Point (pI)

58.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 45 - 67 1.9e-08 C2H2-type zinc finger
zf-C2H2_6 PF13912 276 - 300 3.6e-11 C2H2-type zinc finger
zf-C2H2_6 PF13912 386 - 409 9.8e-09 C2H2-type zinc finger
zf-C2H2_6 PF13912 447 - 471 3.4e-09 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g07960 FvH4_2g07970
rosa_chinensis RchiOBHm_Chr6g0262421
rosa_laevigata RLG00000014430
rosa_multiflora Rmu_sc0022687.1_g000001 Rmu_sc0022688.1_g000001
rosa_roxburghii Rroxscaffold_7G00205290
rosa_rugosa Rorug05G0597100
rosa_samantha Rh6AG117900 Rh6BG111900 Rh6CG109900 Rh6DG099500
rosa_wichuraiana Rw6G010230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 351, 1546
Acc36I ACCTGC 2 cut(s) 452, 466
Acc65I GGTACC 1 cut(s) 503
AccB1I GGYRCC 1 cut(s) 503
AccB7I CCANNNNNTGG 4 cut(s) 178, 871, 1039, 1201
AccII CGCG 2 cut(s) 207, 433
AciI CCGC 8 cut(s) 80, 344, 357, 608, 650, 748, 1164, 1274
AclWI GGATC 3 cut(s) 587, 927, 1260
AcoI YGGCCR 1 cut(s) 169
AcsI RAATTY 3 cut(s) 670, 1181, 1472
AcuI CTGAAG 1 cut(s) 1317
AfaI GTAC 5 cut(s) 30, 241, 505, 1232, 1335
AfiI CCNNNNNNNGG 7 cut(s) 178, 343, 344, 871, 1039, 1066, 1201
AflII CTTAAG 1 cut(s) 1054
AflIII ACRYGT 1 cut(s) 882
AgeI ACCGGT 1 cut(s) 1286
AgsI TTSAA 3 cut(s) 130, 1151, 1472
AhlI ACTAGT 1 cut(s) 857
AjnI CCWGG 1 cut(s) 687
AleI CACNNNNGTG 1 cut(s) 138
AloI GAACNNNNNNTCC 2 cut(s) 269, 301
AluBI AGCT 5 cut(s) 785, 838, 869, 999, 1199
AluI AGCT 5 cut(s) 785, 838, 869, 999, 1199
Alw21I GWGCWC 1 cut(s) 1459
Alw26I GTCTC 1 cut(s) 266
AlwI GGATC 3 cut(s) 587, 927, 1260
AlwNI CAGNNNCTG 1 cut(s) 515
Ama87I CYCGRG 2 cut(s) 339, 550
AoxI GGCC 3 cut(s) 169, 1414, 1463
ApaI GGGCCC 1 cut(s) 1418
ApeKI GCWGC 2 cut(s) 782, 999
ApoI RAATTY 3 cut(s) 670, 1181, 1472
AseI ATTAAT 1 cut(s) 678
AsiGI ACCGGT 1 cut(s) 1286
Asp700I GAANNNNTTC 1 cut(s) 278
Asp718I GGTACC 1 cut(s) 503
AspLEI GCGC 1 cut(s) 1048
AspS9I GGNCC 4 cut(s) 165, 1414, 1415, 1464
AsuHPI GGTGA 2 cut(s) 214, 1331
AsuII TTCGAA 1 cut(s) 945
AvaI CYCGRG 2 cut(s) 339, 550
AvaII GGWCC 1 cut(s) 165
AxyI CCTNAGG 1 cut(s) 311
BaeGI GKGCMC 1 cut(s) 1418
BanI GGYRCC 1 cut(s) 503
BanII GRGCYC 1 cut(s) 1418
BbsI GAAGAC 1 cut(s) 1367
Bbv12I GWGCWC 1 cut(s) 1459
BbvCI CCTCAGC 1 cut(s) 508
BbvI GCAGC 2 cut(s) 794, 986
BccI CCATC 5 cut(s) 395, 407, 752, 768, 1501
BciT130I CCWGG 1 cut(s) 689
BclI TGATCA 3 cut(s) 10, 787, 925
BcoDI GTCTC 1 cut(s) 266
BcuI ACTAGT 1 cut(s) 857
BfaI CTAG 3 cut(s) 477, 660, 858
BfmI CTRYAG 2 cut(s) 459, 780
BfrI CTTAAG 1 cut(s) 1054
BfuAI ACCTGC 2 cut(s) 452, 466
BisI GCNGC 4 cut(s) 358, 749, 783, 1000
BlsI GCNGC 4 cut(s) 359, 750, 784, 1001
Bme1390I CCNGG 1 cut(s) 689
Bme18I GGWCC 1 cut(s) 165
BmeT110I CYCGRG 2 cut(s) 339, 550
BmgT120I GGNCC 4 cut(s) 165, 1414, 1415, 1464
BmiI GGNNCC 3 cut(s) 505, 1416, 1466
BmrFI CCNGG 1 cut(s) 689
BmsI GCATC 3 cut(s) 60, 621, 821
BoxI GACNNNNGTC 1 cut(s) 1213
BpiI GAAGAC 1 cut(s) 1367
BplI GAGNNNNNCTC 2 cut(s) 1441, 1473
BpmI CTGGAG 1 cut(s) 1443
Bpu10I CCTNAGC 3 cut(s) 508, 639, 1134
Bpu14I TTCGAA 1 cut(s) 945
BpuEI CTTGAG 2 cut(s) 887, 963
BsaBI GATNNNNATC 4 cut(s) 9, 713, 924, 1257
BsaJI CCNNGG 4 cut(s) 177, 338, 499, 1038
BsaWI WCCGGW 1 cut(s) 1286
BsaXI ACNNNNNCTCC 2 cut(s) 269, 299
Bsc4I CCNNNNNNNGG 7 cut(s) 178, 343, 344, 871, 1039, 1066, 1201
Bse118I RCCGGY 2 cut(s) 897, 1286
Bse1I ACTGG 6 cut(s) 225, 237, 243, 328, 606, 1426
Bse21I CCTNAGG 1 cut(s) 311
Bse3DI GCAATG 3 cut(s) 814, 1009, 1060
Bse8I GATNNNNATC 4 cut(s) 9, 713, 924, 1257
BseBI CCWGG 1 cut(s) 689
BseDI CCNNGG 4 cut(s) 177, 338, 499, 1038
BseGI GGATG 4 cut(s) 10, 964, 1075, 1510
BseJI GATNNNNATC 4 cut(s) 9, 713, 924, 1257
BseLI CCNNNNNNNGG 7 cut(s) 178, 343, 344, 871, 1039, 1066, 1201
BseMI GCAATG 3 cut(s) 814, 1009, 1060
BseMII CTCAG 7 cut(s) 38, 302, 522, 653, 1038, 1110, 1125
BseNI ACTGG 6 cut(s) 225, 237, 243, 328, 606, 1426
BseRI GAGGAG 5 cut(s) 111, 626, 668, 757, 966
BseSI GKGCMC 1 cut(s) 1418
BseXI GCAGC 2 cut(s) 794, 986
BseYI CCCAGC 1 cut(s) 102
Bsh1236I CGCG 2 cut(s) 207, 433
Bsh1285I CGRYCG 1 cut(s) 1291
BshFI GGCC 3 cut(s) 171, 1416, 1465
BshNI GGYRCC 1 cut(s) 503
BshTI ACCGGT 1 cut(s) 1286
BsiEI CGRYCG 1 cut(s) 1291
BsiHKAI GWGCWC 1 cut(s) 1459
BsiHKCI CYCGRG 2 cut(s) 339, 550
BsiSI CCGG 4 cut(s) 83, 168, 898, 1287
BslFI GGGAC 2 cut(s) 319, 552
BslI CCNNNNNNNGG 7 cut(s) 178, 343, 344, 871, 1039, 1066, 1201
BsmAI GTCTC 1 cut(s) 266
BsmFI GGGAC 2 cut(s) 319, 552
BsmI GAATGC 2 cut(s) 740, 1358
BsnI GGCC 3 cut(s) 171, 1416, 1465
BsoBI CYCGRG 2 cut(s) 339, 550
Bsp119I TTCGAA 1 cut(s) 945
Bsp120I GGGCCC 1 cut(s) 1414
Bsp1286I GDGCHC 2 cut(s) 1418, 1459
Bsp68I TCGCGA 1 cut(s) 207
BspACI CCGC 8 cut(s) 80, 344, 357, 608, 650, 748, 1164, 1274
BspANI GGCC 3 cut(s) 171, 1416, 1465
BspCNI CTCAG 7 cut(s) 37, 303, 521, 652, 1037, 1109, 1126
BspFNI CGCG 2 cut(s) 207, 433
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 3 cut(s) 505, 1416, 1466
BspMAI CTGCAG 2 cut(s) 463, 784
BspMI ACCTGC 2 cut(s) 452, 466
BspPI GGATC 3 cut(s) 587, 927, 1260
BspT104I TTCGAA 1 cut(s) 945
BspT107I GGYRCC 1 cut(s) 503
BspTI CTTAAG 1 cut(s) 1054
BsrDI GCAATG 3 cut(s) 814, 1009, 1060
BsrFI RCCGGY 2 cut(s) 897, 1286
BsrI ACTGG 6 cut(s) 225, 237, 243, 328, 606, 1426
BssAI RCCGGY 2 cut(s) 897, 1286
BssECI CCNNGG 4 cut(s) 177, 338, 499, 1038
BssT1I CCWWGG 3 cut(s) 177, 499, 1038
Bst2UI CCWGG 1 cut(s) 689
Bst4CI ACNGT 6 cut(s) 110, 376, 589, 1109, 1160, 1333
Bst6I CTCTTC 2 cut(s) 370, 975
BstAFI CTTAAG 1 cut(s) 1054
BstAPI GCANNNNNTGC 2 cut(s) 840, 1008
BstBI TTCGAA 1 cut(s) 945
BstC8I GCNNGC 4 cut(s) 99, 544, 636, 836
BstDEI CTNAG 8 cut(s) 24, 66, 311, 508, 639, 1024, 1096, 1134
BstEII GGTNACC 1 cut(s) 1028
BstF5I GGATG 4 cut(s) 10, 964, 1075, 1510
BstFNI CGCG 2 cut(s) 207, 433
BstHHI GCGC 1 cut(s) 1048
BstMAI GTCTC 1 cut(s) 266
BstMCI CGRYCG 1 cut(s) 1291
BstMWI GCNNNNNNNGC 8 cut(s) 79, 103, 656, 840, 996, 1008, 1170, 1353
BstNI CCWGG 1 cut(s) 689
BstNSI RCATGY 1 cut(s) 886
BstPAI GACNNNNGTC 1 cut(s) 1213
BstPI GGTNACC 1 cut(s) 1028
BstSCI CCNGG 1 cut(s) 687
BstSFI CTRYAG 2 cut(s) 459, 780
BstSLI GKGCMC 1 cut(s) 1418
BstUI CGCG 2 cut(s) 207, 433
BstV1I GCAGC 2 cut(s) 794, 986
BstV2I GAAGAC 1 cut(s) 1367
Bsu36I CCTNAGG 1 cut(s) 311
BsuRI GGCC 3 cut(s) 171, 1416, 1465
BtsCI GGATG 4 cut(s) 10, 964, 1075, 1510
BtsIMutI CAGTG 6 cut(s) 232, 250, 321, 372, 625, 1114
BtuMI TCGCGA 1 cut(s) 207
BveI ACCTGC 2 cut(s) 452, 466
Cac8I GCNNGC 4 cut(s) 99, 544, 636, 836
CaiI CAGNNNCTG 1 cut(s) 515
CciI TCATGA 1 cut(s) 922
CfoI GCGC 1 cut(s) 1048
Cfr10I RCCGGY 2 cut(s) 897, 1286
Cfr13I GGNCC 4 cut(s) 165, 1414, 1415, 1464
CpoI CGGWCCG 1 cut(s) 165
CseI GACGC 1 cut(s) 1519
CsiI ACCWGGT 1 cut(s) 687
Csp6I GTAC 5 cut(s) 29, 240, 504, 1231, 1334
CspAI ACCGGT 1 cut(s) 1286
CspI CGGWCCG 1 cut(s) 165
CviAII CATG 3 cut(s) 883, 923, 929
CviQI GTAC 5 cut(s) 29, 240, 504, 1231, 1334
DdeI CTNAG 8 cut(s) 24, 66, 311, 508, 639, 1024, 1096, 1134
EaeI YGGCCR 1 cut(s) 169
Eam1104I CTCTTC 2 cut(s) 370, 975
EarI CTCTTC 2 cut(s) 370, 975
EciI GGCGGA 1 cut(s) 69
Eco130I CCWWGG 3 cut(s) 177, 499, 1038
Eco24I GRGCYC 1 cut(s) 1418
Eco47I GGWCC 1 cut(s) 165
Eco57I CTGAAG 1 cut(s) 1317
Eco81I CCTNAGG 1 cut(s) 311
Eco88I CYCGRG 2 cut(s) 339, 550
Eco91I GGTNACC 1 cut(s) 1028
EcoO109I RGGNCCY 2 cut(s) 1414, 1464
EcoO65I GGTNACC 1 cut(s) 1028
EcoRI GAATTC 1 cut(s) 1181
EcoRII CCWGG 1 cut(s) 687
EcoT14I CCWWGG 3 cut(s) 177, 499, 1038
EcoT38I GRGCYC 1 cut(s) 1418
ErhI CCWWGG 3 cut(s) 177, 499, 1038
FaeI CATG 3 cut(s) 886, 926, 932
FaqI GGGAC 2 cut(s) 319, 552
FatI CATG 3 cut(s) 882, 922, 928
FauI CCCGC 1 cut(s) 337
FauNDI CATATG 1 cut(s) 137
FbaI TGATCA 3 cut(s) 10, 787, 925
Fnu4HI GCNGC 4 cut(s) 358, 749, 783, 1000
FokI GGATG 4 cut(s) 17, 951, 1082, 1517
FriOI GRGCYC 1 cut(s) 1418
Fsp4HI GCNGC 4 cut(s) 358, 749, 783, 1000
FspBI CTAG 3 cut(s) 477, 660, 858
GlaI GCGC 1 cut(s) 1047
GluI GCNGC 4 cut(s) 358, 749, 783, 1000
GsaI CCCAGC 1 cut(s) 106
GsuI CTGGAG 1 cut(s) 1443
HaeIII GGCC 3 cut(s) 171, 1416, 1465
HapII CCGG 4 cut(s) 83, 168, 898, 1287
HgaI GACGC 1 cut(s) 1519
HhaI GCGC 1 cut(s) 1048
Hin1II CATG 3 cut(s) 886, 926, 932
Hin6I GCGC 1 cut(s) 1046
HinP1I GCGC 1 cut(s) 1046
HindIII AAGCTT 3 cut(s) 836, 867, 1197
HinfI GANTC 8 cut(s) 130, 422, 451, 560, 565, 818, 1441, 1489
HpaII CCGG 4 cut(s) 83, 168, 898, 1287
HphI GGTGA 2 cut(s) 214, 1331
Hpy166II GTNNAC 1 cut(s) 1075
Hpy188I TCNGA 6 cut(s) 382, 517, 532, 597, 708, 823
Hpy188III TCNNGA 4 cut(s) 206, 904, 923, 1256
Hpy8I GTNNAC 1 cut(s) 1075
HpyAV CCTTC 1 cut(s) 1405
HpyCH4III ACNGT 6 cut(s) 110, 376, 589, 1109, 1160, 1333
HpyCH4IV ACGT 2 cut(s) 392, 1312
HpyF10VI GCNNNNNNNGC 8 cut(s) 79, 103, 656, 840, 996, 1008, 1170, 1353
HpyF3I CTNAG 8 cut(s) 24, 66, 311, 508, 639, 1024, 1096, 1134
HpySE526I ACGT 2 cut(s) 392, 1312
Hsp92II CATG 3 cut(s) 886, 926, 932
HspAI GCGC 1 cut(s) 1046
KpnI GGTACC 1 cut(s) 507
Ksp22I TGATCA 3 cut(s) 10, 787, 925
LmnI GCTCC 2 cut(s) 1043, 1424
Lsp1109I GCAGC 2 cut(s) 794, 986
LweI GCATC 3 cut(s) 60, 621, 821
MabI ACCWGGT 1 cut(s) 687
MaeI CTAG 3 cut(s) 477, 660, 858
MaeII ACGT 2 cut(s) 392, 1312
MfeI CAATTG 1 cut(s) 802
MhlI GDGCHC 2 cut(s) 1418, 1459
MlyI GAGTC 3 cut(s) 445, 574, 1450
MmeI TCCRAC 2 cut(s) 537, 555
MroXI GAANNNNTTC 1 cut(s) 278
MseI TTAA 4 cut(s) 678, 939, 1055, 1116
MslI CAYNNNNRTG 3 cut(s) 68, 138, 927
MspA1I CMGCKG 3 cut(s) 357, 785, 999
MspCI CTTAAG 1 cut(s) 1054
MspI CCGG 4 cut(s) 83, 168, 898, 1287
MspR9I CCNGG 1 cut(s) 689
MunI CAATTG 1 cut(s) 802
Mva1269I GAATGC 2 cut(s) 740, 1358
MvaI CCWGG 1 cut(s) 689
MvnI CGCG 2 cut(s) 207, 433
MwoI GCNNNNNNNGC 8 cut(s) 79, 103, 656, 840, 996, 1008, 1170, 1353
NdeI CATATG 1 cut(s) 137
NlaIII CATG 3 cut(s) 886, 926, 932
NlaIV GGNNCC 3 cut(s) 505, 1416, 1466
NmuCI GTSAC 4 cut(s) 185, 245, 315, 878
NruI TCGCGA 1 cut(s) 207
NspI RCATGY 1 cut(s) 886
NspV TTCGAA 1 cut(s) 945
OliI CACNNNNGTG 1 cut(s) 138
PagI TCATGA 1 cut(s) 922
PciI ACATGT 1 cut(s) 882
PctI GAATGC 2 cut(s) 740, 1358
PdmI GAANNNNTTC 1 cut(s) 278
PfeI GAWTC 5 cut(s) 130, 422, 560, 818, 1489
PflMI CCANNNNNTGG 4 cut(s) 178, 871, 1039, 1201
PinAI ACCGGT 1 cut(s) 1286
PkrI GCNGC 4 cut(s) 359, 750, 784, 1001
PleI GAGTC 3 cut(s) 445, 573, 1449
PpsI GAGTC 3 cut(s) 445, 573, 1449
PscI ACATGT 1 cut(s) 882
PshAI GACNNNNGTC 1 cut(s) 1213
PshBI ATTAAT 1 cut(s) 678
PsiI TTATAA 2 cut(s) 351, 1546
Psp6I CCWGG 1 cut(s) 687
PspEI GGTNACC 1 cut(s) 1028
PspFI CCCAGC 1 cut(s) 102
PspGI CCWGG 1 cut(s) 687
PspN4I GGNNCC 3 cut(s) 505, 1416, 1466
PspOMI GGGCCC 1 cut(s) 1414
PspPI GGNCC 4 cut(s) 165, 1414, 1415, 1464
PstI CTGCAG 2 cut(s) 463, 784
PstNI CAGNNNCTG 1 cut(s) 515
PvuII CAGCTG 2 cut(s) 785, 999
RruI TCGCGA 1 cut(s) 207
RsaI GTAC 5 cut(s) 30, 241, 505, 1232, 1335
RsaNI GTAC 5 cut(s) 29, 240, 504, 1231, 1334
RseI CAYNNNNRTG 3 cut(s) 68, 138, 927
Rsr2I CGGWCCG 1 cut(s) 165
RsrII CGGWCCG 1 cut(s) 165
SaqAI TTAA 4 cut(s) 678, 939, 1055, 1116
SatI GCNGC 4 cut(s) 358, 749, 783, 1000
Sau96I GGNCC 4 cut(s) 165, 1414, 1415, 1464
SbfI CCTGCAGG 1 cut(s) 463
SchI GAGTC 3 cut(s) 445, 574, 1450
ScrFI CCNGG 1 cut(s) 689
SdaI CCTGCAGG 1 cut(s) 463
SduI GDGCHC 2 cut(s) 1418, 1459
SexAI ACCWGGT 1 cut(s) 687
SfaNI GCATC 3 cut(s) 60, 621, 821
SfcI CTRYAG 2 cut(s) 459, 780
SfuI TTCGAA 1 cut(s) 945
SinI GGWCC 1 cut(s) 165
SmiMI CAYNNNNRTG 3 cut(s) 68, 138, 927
SmlI CTYRAG 3 cut(s) 902, 978, 1054
SmoI CTYRAG 3 cut(s) 902, 978, 1054
SpeI ACTAGT 1 cut(s) 857
Sse8387I CCTGCAGG 1 cut(s) 463
SsiI CCGC 8 cut(s) 80, 344, 357, 608, 650, 748, 1164, 1274
SspMI CTAG 3 cut(s) 477, 660, 858
StyD4I CCNGG 1 cut(s) 687
StyI CCWWGG 3 cut(s) 177, 499, 1038
TaaI ACNGT 6 cut(s) 110, 376, 589, 1109, 1160, 1333
TaiI ACGT 2 cut(s) 395, 1315
TaqI TCGA 6 cut(s) 304, 563, 711, 732, 945, 1255
TaqII GACCGA 1 cut(s) 153
TatI WGTACW 1 cut(s) 1230
TauI GCSGC 2 cut(s) 360, 751
TfiI GAWTC 5 cut(s) 130, 422, 560, 818, 1489
Tru1I TTAA 4 cut(s) 678, 939, 1055, 1116
Tru9I TTAA 4 cut(s) 678, 939, 1055, 1116
TscAI CASTG 6 cut(s) 232, 250, 328, 379, 625, 1114
TseFI GTSAC 4 cut(s) 185, 245, 315, 878
TseI GCWGC 2 cut(s) 782, 999
Tsp45I GTSAC 4 cut(s) 185, 245, 315, 878
TspDTI ATGAA 7 cut(s) 549, 780, 972, 1323, 1394, 1521, 1527
TspRI CASTG 6 cut(s) 232, 250, 328, 379, 625, 1114
Van91I CCANNNNNTGG 4 cut(s) 178, 871, 1039, 1201
Vha464I CTTAAG 1 cut(s) 1054
VpaK11BI GGWCC 1 cut(s) 165
VspI ATTAAT 1 cut(s) 678
XapI RAATTY 3 cut(s) 670, 1181, 1472
XceI RCATGY 1 cut(s) 886
XmnI GAANNNNTTC 1 cut(s) 278
XspI CTAG 3 cut(s) 477, 660, 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.