Rh6BG111900

C2H2-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0017239
Physical Location & Seq
Forward (+)
17489515 .. 17491065
1551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG111900.1

Sequence Viewer

Length: 1551 bp
ATGGATACTGATCACAAAGAAACTCAGGTGCTTCTTCCCAACTCCATTGATCTACAACAACCCACTAAGATGCCAACTCCGCCGGAGGCTTTAGAGCAAGCCCAGCACCGTGAAGTTTCTCCTCCATTGAATCACATCTGTGATATTTGCCACAAGGGATTTCGGTCCGGCCAAGCCTTGGGAGGTCACAAGAGTATGCACTTTCGCGAGAGCGAGGCCATCATCACTGGTGCTACTACCAGTACCAGTGATCCAATTTGTTGTCTCGTTTGTGGGAAGAACTTCCTCTCCAAGAAATCGCTGTTTCGACACCTGAGGTCACACACTGGAAACCTGTCCCCTCGGGCGGGCTATAACAGCGGCAACTCTTCTTCCACTGTGTCAGATGAGCCTACGTTTGATGATGGCAAATGTGATGGGGTTGATTCGGGTTCGCGTTTTGATCTGGCCAAGACTCTACCTGCAGGTTGGTCTATCACTAGAAAGAGGAAAACGAATGCCCTTGGTACCTCAGCCTCTGATTGCTCTGGCTCTGATGAAACTGCTGGCAACTCGGGGTTGGATTTGAGTCCCAAGTTGGAATTAGTAACTGTTGATCAGAAACTAGAAGCGGAGGAGTTCAGTGGTCTTGTGATGCTGGCTCAGGTCTGTGCCGAGGAGGCTAGTCGCAGAAATTTGATTAATAATAACCAGGTTTATCAGAATGGTCAGATCGAAATCAGGTATGTTGCAATCGAATGCAAGAGGAGGCGGCTGAATGATGGGTATGAAAGAAGATGGTCTGCAGCTGATCATTATGGTTACAATTGCAATGACATTGATTCTGATTTTAGATGCAAGCTTTGCAATAAAACATTCACAAGTTACCAAGCTTTGGGAGGTCACATGTCAAGCCATTACCGGCTCAAGATCAACTCAAAGGATCATGATCATGCCCACTTTAACTTCGAACAACACAATGAACAACATTCTCTTCCTCCTCAAGTGGTTAGCACATACAGCTGCAATGTTTGCGATAAAACTTTCTCAGGTTACCAAGCCTTGGGAGCGCACATCTTAAGCCATTGCAAGGATGTGAACGACAACAACACGCACAATTCAGCACATAACAGTGTTATTAAAGATAACAATGTGCCTGAGCCTCGTCAAGTTGAATTGCACAGTTGCGGTGTTTGCAATAAAGAATTCACAAGTTACCAAGCTTTGGGAGGACACAAGTCAAGCCATACGAAGTACAACAACAACAATAATATGGATCGAGATCAATCTAATTCTGCGGATATATCAACCGGTGGTGCTGAAGATAAGAATGAACGTCAAAAACTCTATGTAACAGTACCTCACCAATGCGAAGAATGTAAGAAGACTTTTCCAACAGGTCAGGCTTTGGGGGGTCATAAGAGGCTTCATTGGAAGGGCCCAACTGGAGCTACAGCGAAACCGAGTCAGCAGAGTAGTGCTCGTAGGCCCCTTGAATTTGACCTCAATGAGATTCCATCTATGGAGGATGAAGATGAAATAAATGTGCCGAGCGTCCTCTTGCAATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_6

Protein Analysis

516

Amino Acids

57.22

Weight (kDa)

6.36

Isoelectric Point (pI)

55.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 45 - 67 1.9e-08 C2H2-type zinc finger
zf-C2H2_6 PF13912 277 - 301 3.6e-11 C2H2-type zinc finger
zf-C2H2_6 PF13912 387 - 410 9.8e-09 C2H2-type zinc finger
zf-C2H2_6 PF13912 448 - 472 3.4e-09 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g07960 FvH4_2g07970
rosa_chinensis RchiOBHm_Chr6g0262421
rosa_laevigata RLG00000014430
rosa_multiflora Rmu_sc0022687.1_g000001 Rmu_sc0022688.1_g000001
rosa_roxburghii Rroxscaffold_7G00205290
rosa_rugosa Rorug05G0597100
rosa_samantha Rh6AG117900 Rh6BG111900 Rh6CG109900 Rh6DG099500
rosa_wichuraiana Rw6G010230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 455, 469
Acc65I GGTACC 1 cut(s) 506
AccB1I GGYRCC 1 cut(s) 506
AccB7I CCANNNNNTGG 4 cut(s) 178, 874, 1042, 1204
AccII CGCG 2 cut(s) 207, 436
AciI CCGC 7 cut(s) 80, 347, 360, 611, 751, 1167, 1277
AclWI GGATC 3 cut(s) 245, 930, 1263
AcoI YGGCCR 2 cut(s) 169, 447
AcsI RAATTY 3 cut(s) 673, 1184, 1475
AcuI CTGAAG 1 cut(s) 1320
AfaI GTAC 4 cut(s) 244, 508, 1235, 1338
AfiI CCNNNNNNNGG 7 cut(s) 178, 346, 347, 874, 1042, 1069, 1204
AflII CTTAAG 1 cut(s) 1057
AflIII ACRYGT 1 cut(s) 885
AgeI ACCGGT 1 cut(s) 1289
AgsI TTSAA 3 cut(s) 130, 1154, 1475
AjnI CCWGG 1 cut(s) 690
AleI CACNNNNGTG 1 cut(s) 138
AloI GAACNNNNNNTCC 2 cut(s) 272, 304
AluBI AGCT 6 cut(s) 788, 841, 872, 1002, 1202, 1430
AluI AGCT 6 cut(s) 788, 841, 872, 1002, 1202, 1430
Alw21I GWGCWC 1 cut(s) 1462
Alw26I GTCTC 1 cut(s) 269
AlwI GGATC 3 cut(s) 245, 930, 1263
AlwNI CAGNNNCTG 1 cut(s) 518
Ama87I CYCGRG 2 cut(s) 342, 553
AoxI GGCC 5 cut(s) 169, 216, 447, 1417, 1466
ApaI GGGCCC 1 cut(s) 1421
ApeKI GCWGC 2 cut(s) 785, 1002
ApoI RAATTY 3 cut(s) 673, 1184, 1475
AseI ATTAAT 1 cut(s) 681
AsiGI ACCGGT 1 cut(s) 1289
Asp700I GAANNNNTTC 1 cut(s) 281
Asp718I GGTACC 1 cut(s) 506
AspLEI GCGC 1 cut(s) 1051
AspS9I GGNCC 4 cut(s) 165, 1417, 1418, 1467
AsuHPI GGTGA 1 cut(s) 1334
AsuII TTCGAA 1 cut(s) 948
AvaI CYCGRG 2 cut(s) 342, 553
AvaII GGWCC 1 cut(s) 165
AxyI CCTNAGG 1 cut(s) 314
BaeGI GKGCMC 1 cut(s) 1421
BalI TGGCCA 1 cut(s) 449
BanI GGYRCC 1 cut(s) 506
BanII GRGCYC 1 cut(s) 1421
BbsI GAAGAC 1 cut(s) 1370
Bbv12I GWGCWC 1 cut(s) 1462
BbvCI CCTCAGC 1 cut(s) 511
BbvI GCAGC 2 cut(s) 797, 989
BccI CCATC 6 cut(s) 227, 398, 410, 755, 771, 1504
BciT130I CCWGG 1 cut(s) 692
BclI TGATCA 4 cut(s) 10, 595, 790, 928
BcoDI GTCTC 1 cut(s) 269
BfaI CTAG 3 cut(s) 480, 605, 663
BfmI CTRYAG 3 cut(s) 462, 783, 1431
BfrI CTTAAG 1 cut(s) 1057
BfuAI ACCTGC 2 cut(s) 455, 469
BglI GCCNNNNNGGC 1 cut(s) 659
BisI GCNGC 4 cut(s) 361, 752, 786, 1003
BlsI GCNGC 4 cut(s) 362, 753, 787, 1004
Bme1390I CCNGG 1 cut(s) 692
Bme18I GGWCC 1 cut(s) 165
BmeT110I CYCGRG 2 cut(s) 342, 553
BmgT120I GGNCC 4 cut(s) 165, 1417, 1418, 1467
BmiI GGNNCC 3 cut(s) 508, 1419, 1469
BmrFI CCNGG 1 cut(s) 692
BmsI GCATC 3 cut(s) 60, 624, 824
BoxI GACNNNNGTC 1 cut(s) 1216
BpiI GAAGAC 1 cut(s) 1370
BplI GAGNNNNNCTC 2 cut(s) 1444, 1476
BpmI CTGGAG 1 cut(s) 1446
Bpu10I CCTNAGC 3 cut(s) 511, 642, 1137
Bpu14I TTCGAA 1 cut(s) 948
BpuEI CTTGAG 2 cut(s) 890, 966
BsaBI GATNNNNATC 4 cut(s) 9, 716, 927, 1260
BsaJI CCNNGG 5 cut(s) 177, 341, 502, 654, 1041
BsaWI WCCGGW 1 cut(s) 1289
BsaXI ACNNNNNCTCC 2 cut(s) 272, 302
Bsc4I CCNNNNNNNGG 7 cut(s) 178, 346, 347, 874, 1042, 1069, 1204
Bse118I RCCGGY 2 cut(s) 900, 1289
Bse1I ACTGG 5 cut(s) 232, 240, 246, 331, 1429
Bse21I CCTNAGG 1 cut(s) 314
Bse3DI GCAATG 3 cut(s) 817, 1012, 1063
Bse8I GATNNNNATC 4 cut(s) 9, 716, 927, 1260
BseBI CCWGG 1 cut(s) 692
BseDI CCNNGG 5 cut(s) 177, 341, 502, 654, 1041
BseGI GGATG 2 cut(s) 1078, 1513
BseJI GATNNNNATC 4 cut(s) 9, 716, 927, 1260
BseLI CCNNNNNNNGG 7 cut(s) 178, 346, 347, 874, 1042, 1069, 1204
BseMI GCAATG 3 cut(s) 817, 1012, 1063
BseMII CTCAG 6 cut(s) 38, 305, 525, 656, 1041, 1128
BseNI ACTGG 5 cut(s) 232, 240, 246, 331, 1429
BseRI GAGGAG 5 cut(s) 111, 629, 671, 760, 969
BseSI GKGCMC 1 cut(s) 1421
BseXI GCAGC 2 cut(s) 797, 989
BseYI CCCAGC 1 cut(s) 102
Bsh1236I CGCG 2 cut(s) 207, 436
BshFI GGCC 5 cut(s) 171, 218, 449, 1419, 1468
BshNI GGYRCC 1 cut(s) 506
BshTI ACCGGT 1 cut(s) 1289
BsiHKAI GWGCWC 1 cut(s) 1462
BsiHKCI CYCGRG 2 cut(s) 342, 553
BsiSI CCGG 4 cut(s) 83, 168, 901, 1290
BslFI GGGAC 2 cut(s) 322, 555
BslI CCNNNNNNNGG 7 cut(s) 178, 346, 347, 874, 1042, 1069, 1204
BsmAI GTCTC 1 cut(s) 269
BsmFI GGGAC 2 cut(s) 322, 555
BsmI GAATGC 2 cut(s) 502, 743
BsnI GGCC 5 cut(s) 171, 218, 449, 1419, 1468
BsoBI CYCGRG 2 cut(s) 342, 553
Bsp119I TTCGAA 1 cut(s) 948
Bsp120I GGGCCC 1 cut(s) 1417
Bsp1286I GDGCHC 2 cut(s) 1421, 1462
Bsp68I TCGCGA 1 cut(s) 207
BspACI CCGC 7 cut(s) 80, 347, 360, 611, 751, 1167, 1277
BspANI GGCC 5 cut(s) 171, 218, 449, 1419, 1468
BspCNI CTCAG 6 cut(s) 37, 306, 524, 655, 1040, 1129
BspFNI CGCG 2 cut(s) 207, 436
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 3 cut(s) 508, 1419, 1469
BspMAI CTGCAG 2 cut(s) 466, 787
BspMI ACCTGC 2 cut(s) 455, 469
BspPI GGATC 3 cut(s) 245, 930, 1263
BspT104I TTCGAA 1 cut(s) 948
BspT107I GGYRCC 1 cut(s) 506
BspTI CTTAAG 1 cut(s) 1057
BsrDI GCAATG 3 cut(s) 817, 1012, 1063
BsrFI RCCGGY 2 cut(s) 900, 1289
BsrI ACTGG 5 cut(s) 232, 240, 246, 331, 1429
BssAI RCCGGY 2 cut(s) 900, 1289
BssECI CCNNGG 5 cut(s) 177, 341, 502, 654, 1041
BssT1I CCWWGG 3 cut(s) 177, 502, 1041
Bst2UI CCWGG 1 cut(s) 692
Bst4CI ACNGT 6 cut(s) 110, 379, 592, 1112, 1163, 1336
Bst6I CTCTTC 2 cut(s) 373, 978
BstAFI CTTAAG 1 cut(s) 1057
BstAPI GCANNNNNTGC 2 cut(s) 843, 1011
BstBI TTCGAA 1 cut(s) 948
BstC8I GCNNGC 5 cut(s) 99, 349, 547, 639, 839
BstDEI CTNAG 7 cut(s) 24, 66, 314, 511, 642, 1027, 1137
BstEII GGTNACC 1 cut(s) 1031
BstF5I GGATG 2 cut(s) 1078, 1513
BstFNI CGCG 2 cut(s) 207, 436
BstHHI GCGC 1 cut(s) 1051
BstMAI GTCTC 1 cut(s) 269
BstMWI GCNNNNNNNGC 9 cut(s) 79, 103, 357, 659, 843, 999, 1011, 1046, 1173
BstNI CCWGG 1 cut(s) 692
BstNSI RCATGY 1 cut(s) 889
BstPAI GACNNNNGTC 1 cut(s) 1216
BstPI GGTNACC 1 cut(s) 1031
BstSCI CCNGG 1 cut(s) 690
BstSFI CTRYAG 3 cut(s) 462, 783, 1431
BstSLI GKGCMC 1 cut(s) 1421
BstUI CGCG 2 cut(s) 207, 436
BstV1I GCAGC 2 cut(s) 797, 989
BstV2I GAAGAC 1 cut(s) 1370
Bsu36I CCTNAGG 1 cut(s) 314
BsuRI GGCC 5 cut(s) 171, 218, 449, 1419, 1468
BtsCI GGATG 2 cut(s) 1078, 1513
BtsIMutI CAGTG 6 cut(s) 225, 253, 324, 375, 628, 1117
BtuMI TCGCGA 1 cut(s) 207
BveI ACCTGC 2 cut(s) 455, 469
Cac8I GCNNGC 5 cut(s) 99, 349, 547, 639, 839
CaiI CAGNNNCTG 1 cut(s) 518
CciI TCATGA 1 cut(s) 925
CfoI GCGC 1 cut(s) 1051
Cfr10I RCCGGY 2 cut(s) 900, 1289
Cfr13I GGNCC 4 cut(s) 165, 1417, 1418, 1467
CpoI CGGWCCG 1 cut(s) 165
CseI GACGC 1 cut(s) 1522
CsiI ACCWGGT 1 cut(s) 690
Csp6I GTAC 4 cut(s) 243, 507, 1234, 1337
CspAI ACCGGT 1 cut(s) 1289
CspI CGGWCCG 1 cut(s) 165
CviAII CATG 3 cut(s) 886, 926, 932
CviQI GTAC 4 cut(s) 243, 507, 1234, 1337
DdeI CTNAG 7 cut(s) 24, 66, 314, 511, 642, 1027, 1137
EaeI YGGCCR 2 cut(s) 169, 447
Eam1104I CTCTTC 2 cut(s) 373, 978
EarI CTCTTC 2 cut(s) 373, 978
EciI GGCGGA 1 cut(s) 69
Eco130I CCWWGG 3 cut(s) 177, 502, 1041
Eco24I GRGCYC 1 cut(s) 1421
Eco47I GGWCC 1 cut(s) 165
Eco57I CTGAAG 1 cut(s) 1320
Eco81I CCTNAGG 1 cut(s) 314
Eco88I CYCGRG 2 cut(s) 342, 553
Eco91I GGTNACC 1 cut(s) 1031
EcoO109I RGGNCCY 2 cut(s) 1417, 1467
EcoO65I GGTNACC 1 cut(s) 1031
EcoRI GAATTC 1 cut(s) 1184
EcoRII CCWGG 1 cut(s) 690
EcoT14I CCWWGG 3 cut(s) 177, 502, 1041
EcoT38I GRGCYC 1 cut(s) 1421
ErhI CCWWGG 3 cut(s) 177, 502, 1041
FaeI CATG 3 cut(s) 889, 929, 935
FaqI GGGAC 2 cut(s) 322, 555
FatI CATG 3 cut(s) 885, 925, 931
FauI CCCGC 1 cut(s) 340
FbaI TGATCA 4 cut(s) 10, 595, 790, 928
Fnu4HI GCNGC 4 cut(s) 361, 752, 786, 1003
FokI GGATG 2 cut(s) 1085, 1520
FriOI GRGCYC 1 cut(s) 1421
Fsp4HI GCNGC 4 cut(s) 361, 752, 786, 1003
FspBI CTAG 3 cut(s) 480, 605, 663
GlaI GCGC 1 cut(s) 1050
GluI GCNGC 4 cut(s) 361, 752, 786, 1003
GsaI CCCAGC 1 cut(s) 106
GsuI CTGGAG 1 cut(s) 1446
HaeIII GGCC 5 cut(s) 171, 218, 449, 1419, 1468
HapII CCGG 4 cut(s) 83, 168, 901, 1290
HgaI GACGC 1 cut(s) 1522
HhaI GCGC 1 cut(s) 1051
Hin1II CATG 3 cut(s) 889, 929, 935
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HindIII AAGCTT 3 cut(s) 839, 870, 1200
HinfI GANTC 7 cut(s) 130, 425, 454, 568, 821, 1444, 1492
HpaII CCGG 4 cut(s) 83, 168, 901, 1290
HphI GGTGA 1 cut(s) 1334
Hpy166II GTNNAC 1 cut(s) 1078
Hpy188I TCNGA 7 cut(s) 385, 520, 535, 600, 702, 711, 826
Hpy188III TCNNGA 4 cut(s) 206, 907, 926, 1259
Hpy8I GTNNAC 1 cut(s) 1078
HpyAV CCTTC 1 cut(s) 1408
HpyCH4III ACNGT 6 cut(s) 110, 379, 592, 1112, 1163, 1336
HpyCH4IV ACGT 2 cut(s) 395, 1315
HpyF10VI GCNNNNNNNGC 9 cut(s) 79, 103, 357, 659, 843, 999, 1011, 1046, 1173
HpyF3I CTNAG 7 cut(s) 24, 66, 314, 511, 642, 1027, 1137
HpySE526I ACGT 2 cut(s) 395, 1315
Hsp92II CATG 3 cut(s) 889, 929, 935
HspAI GCGC 1 cut(s) 1049
KpnI GGTACC 1 cut(s) 510
Ksp22I TGATCA 4 cut(s) 10, 595, 790, 928
LmnI GCTCC 2 cut(s) 1046, 1427
Lsp1109I GCAGC 2 cut(s) 797, 989
LweI GCATC 3 cut(s) 60, 624, 824
MabI ACCWGGT 1 cut(s) 690
MaeI CTAG 3 cut(s) 480, 605, 663
MaeII ACGT 2 cut(s) 395, 1315
MaeIII GTNAC 9 cut(s) 185, 318, 586, 800, 863, 881, 1031, 1193, 1330
MfeI CAATTG 1 cut(s) 805
MhlI GDGCHC 2 cut(s) 1421, 1462
MlsI TGGCCA 1 cut(s) 449
MluNI TGGCCA 1 cut(s) 449
MlyI GAGTC 3 cut(s) 448, 577, 1453
MmeI TCCRAC 3 cut(s) 540, 558, 1397
Mox20I TGGCCA 1 cut(s) 449
MroXI GAANNNNTTC 1 cut(s) 281
MscI TGGCCA 1 cut(s) 449
MseI TTAA 4 cut(s) 681, 942, 1058, 1119
MslI CAYNNNNRTG 4 cut(s) 68, 138, 930, 1110
Msp20I TGGCCA 1 cut(s) 449
MspA1I CMGCKG 3 cut(s) 360, 788, 1002
MspCI CTTAAG 1 cut(s) 1057
MspI CCGG 4 cut(s) 83, 168, 901, 1290
MspR9I CCNGG 1 cut(s) 692
MunI CAATTG 1 cut(s) 805
Mva1269I GAATGC 2 cut(s) 502, 743
MvaI CCWGG 1 cut(s) 692
MvnI CGCG 2 cut(s) 207, 436
MwoI GCNNNNNNNGC 9 cut(s) 79, 103, 357, 659, 843, 999, 1011, 1046, 1173
NlaIII CATG 3 cut(s) 889, 929, 935
NlaIV GGNNCC 3 cut(s) 508, 1419, 1469
NmeAIII GCCGAG 1 cut(s) 679
NmuCI GTSAC 3 cut(s) 185, 318, 881
NruI TCGCGA 1 cut(s) 207
NspI RCATGY 1 cut(s) 889
NspV TTCGAA 1 cut(s) 948
OliI CACNNNNGTG 1 cut(s) 138
PagI TCATGA 1 cut(s) 925
PciI ACATGT 1 cut(s) 885
PctI GAATGC 2 cut(s) 502, 743
PdmI GAANNNNTTC 1 cut(s) 281
PfeI GAWTC 4 cut(s) 130, 425, 821, 1492
PflMI CCANNNNNTGG 4 cut(s) 178, 874, 1042, 1204
PinAI ACCGGT 1 cut(s) 1289
PkrI GCNGC 4 cut(s) 362, 753, 787, 1004
PleI GAGTC 3 cut(s) 448, 576, 1452
PpsI GAGTC 3 cut(s) 448, 576, 1452
PscI ACATGT 1 cut(s) 885
PshAI GACNNNNGTC 1 cut(s) 1216
PshBI ATTAAT 1 cut(s) 681
Psp6I CCWGG 1 cut(s) 690
PspEI GGTNACC 1 cut(s) 1031
PspFI CCCAGC 1 cut(s) 102
PspGI CCWGG 1 cut(s) 690
PspN4I GGNNCC 3 cut(s) 508, 1419, 1469
PspOMI GGGCCC 1 cut(s) 1417
PspPI GGNCC 4 cut(s) 165, 1417, 1418, 1467
PstI CTGCAG 2 cut(s) 466, 787
PstNI CAGNNNCTG 1 cut(s) 518
PvuII CAGCTG 2 cut(s) 788, 1002
RruI TCGCGA 1 cut(s) 207
RsaI GTAC 4 cut(s) 244, 508, 1235, 1338
RsaNI GTAC 4 cut(s) 243, 507, 1234, 1337
RseI CAYNNNNRTG 4 cut(s) 68, 138, 930, 1110
Rsr2I CGGWCCG 1 cut(s) 165
RsrII CGGWCCG 1 cut(s) 165
SaqAI TTAA 4 cut(s) 681, 942, 1058, 1119
SatI GCNGC 4 cut(s) 361, 752, 786, 1003
Sau96I GGNCC 4 cut(s) 165, 1417, 1418, 1467
SbfI CCTGCAGG 1 cut(s) 466
SchI GAGTC 3 cut(s) 448, 577, 1453
ScrFI CCNGG 1 cut(s) 692
SdaI CCTGCAGG 1 cut(s) 466
SduI GDGCHC 2 cut(s) 1421, 1462
SexAI ACCWGGT 1 cut(s) 690
SfaNI GCATC 3 cut(s) 60, 624, 824
SfcI CTRYAG 3 cut(s) 462, 783, 1431
SfuI TTCGAA 1 cut(s) 948
SinI GGWCC 1 cut(s) 165
SmiMI CAYNNNNRTG 4 cut(s) 68, 138, 930, 1110
SmlI CTYRAG 3 cut(s) 905, 981, 1057
SmoI CTYRAG 3 cut(s) 905, 981, 1057
Sse8387I CCTGCAGG 1 cut(s) 466
SsiI CCGC 7 cut(s) 80, 347, 360, 611, 751, 1167, 1277
SspMI CTAG 3 cut(s) 480, 605, 663
StyD4I CCNGG 1 cut(s) 690
StyI CCWWGG 3 cut(s) 177, 502, 1041
TaaI ACNGT 6 cut(s) 110, 379, 592, 1112, 1163, 1336
TaiI ACGT 2 cut(s) 398, 1318
TaqI TCGA 5 cut(s) 307, 714, 735, 948, 1258
TaqII GACCGA 1 cut(s) 153
TatI WGTACW 1 cut(s) 1233
TauI GCSGC 2 cut(s) 363, 754
TfiI GAWTC 4 cut(s) 130, 425, 821, 1492
Tru1I TTAA 4 cut(s) 681, 942, 1058, 1119
Tru9I TTAA 4 cut(s) 681, 942, 1058, 1119
TscAI CASTG 6 cut(s) 232, 253, 331, 382, 628, 1117
TseFI GTSAC 3 cut(s) 185, 318, 881
TseI GCWGC 2 cut(s) 785, 1002
Tsp45I GTSAC 3 cut(s) 185, 318, 881
TspDTI ATGAA 7 cut(s) 552, 783, 975, 1326, 1397, 1524, 1530
TspRI CASTG 6 cut(s) 232, 253, 331, 382, 628, 1117
Van91I CCANNNNNTGG 4 cut(s) 178, 874, 1042, 1204
Vha464I CTTAAG 1 cut(s) 1057
VpaK11BI GGWCC 1 cut(s) 165
VspI ATTAAT 1 cut(s) 681
XapI RAATTY 3 cut(s) 673, 1184, 1475
XceI RCATGY 1 cut(s) 889
XmnI GAANNNNTTC 1 cut(s) 281
XspI CTAG 3 cut(s) 480, 605, 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.