ER-associated misfolded protein catabolic process
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g08000 FvH4_2g08000 |
| rosa_chinensis | RchiOBHm_Chr6g0262481 |
| rosa_laevigata | RLG00000014422 |
| rosa_roxburghii | Rroxscaffold_7G00205220 |
| rosa_rugosa | Rorug05G0597600 |
| rosa_samantha | Rh6AG118700 Rh6AG118900 Rh6BG112600 Rh6CG110800 Rh6DG100400 |
| rosa_wichuraiana | Rw6G010250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 173 |
| AclWI | GGATC | 2 cut(s) | 158, 171 |
| AcoI | YGGCCR | 1 cut(s) | 85 |
| AdeI | CACNNNGTG | 1 cut(s) | 83 |
| AfaI | GTAC | 1 cut(s) | 115 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 117, 173 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw21I | GWGCWC | 1 cut(s) | 135 |
| Alw26I | GTCTC | 1 cut(s) | 223 |
| Alw44I | GTGCAC | 1 cut(s) | 131 |
| AlwI | GGATC | 2 cut(s) | 158, 171 |
| AoxI | GGCC | 3 cut(s) | 64, 85, 191 |
| ApaLI | GTGCAC | 1 cut(s) | 131 |
| AspS9I | GGNCC | 1 cut(s) | 65 |
| BaeGI | GKGCMC | 1 cut(s) | 135 |
| BalI | TGGCCA | 1 cut(s) | 87 |
| BamHI | GGATCC | 1 cut(s) | 163 |
| Bbv12I | GWGCWC | 1 cut(s) | 135 |
| BccI | CCATC | 1 cut(s) | 54 |
| BcoDI | GTCTC | 1 cut(s) | 223 |
| BmgT120I | GGNCC | 1 cut(s) | 65 |
| BmiI | GGNNCC | 2 cut(s) | 67, 165 |
| BmrI | ACTGGG | 1 cut(s) | 222 |
| BmsI | GCATC | 2 cut(s) | 23, 142 |
| BmuI | ACTGGG | 1 cut(s) | 222 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 117, 173 |
| Bse1I | ACTGG | 3 cut(s) | 128, 178, 228 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 117, 173 |
| BseMII | CTCAG | 1 cut(s) | 234 |
| BseNI | ACTGG | 3 cut(s) | 128, 178, 228 |
| BseSI | GKGCMC | 1 cut(s) | 135 |
| BshFI | GGCC | 3 cut(s) | 66, 87, 193 |
| BsiHKAI | GWGCWC | 1 cut(s) | 135 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 117, 173 |
| BsmAI | GTCTC | 1 cut(s) | 223 |
| BsnI | GGCC | 3 cut(s) | 66, 87, 193 |
| Bsp1286I | GDGCHC | 1 cut(s) | 135 |
| Bsp1407I | TGTACA | 1 cut(s) | 113 |
| Bsp143I | GATC | 1 cut(s) | 163 |
| BspANI | GGCC | 3 cut(s) | 66, 87, 193 |
| BspCNI | CTCAG | 1 cut(s) | 233 |
| BspLI | GGNNCC | 2 cut(s) | 67, 165 |
| BspPI | GGATC | 2 cut(s) | 158, 171 |
| BsrGI | TGTACA | 1 cut(s) | 113 |
| BsrI | ACTGG | 3 cut(s) | 128, 178, 228 |
| BssMI | GATC | 1 cut(s) | 163 |
| Bst4CI | ACNGT | 1 cut(s) | 217 |
| BstAUI | TGTACA | 1 cut(s) | 113 |
| BstDEI | CTNAG | 1 cut(s) | 220 |
| BstKTI | GATC | 1 cut(s) | 166 |
| BstMAI | GTCTC | 1 cut(s) | 223 |
| BstMBI | GATC | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 33, 42 |
| BstSLI | GKGCMC | 1 cut(s) | 135 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| BsuRI | GGCC | 3 cut(s) | 66, 87, 193 |
| BtsIMutI | CAGTG | 2 cut(s) | 135, 213 |
| Cfr13I | GGNCC | 1 cut(s) | 65 |
| Csp6I | GTAC | 1 cut(s) | 114 |
| CviAII | CATG | 1 cut(s) | 117 |
| CviJI | RGCY | 5 cut(s) | 27, 56, 66, 87, 193 |
| CviKI_1 | RGCY | 5 cut(s) | 27, 56, 66, 87, 193 |
| CviQI | GTAC | 1 cut(s) | 114 |
| DdeI | CTNAG | 1 cut(s) | 220 |
| DpnI | GATC | 1 cut(s) | 165 |
| DpnII | GATC | 1 cut(s) | 163 |
| DraIII | CACNNNGTG | 1 cut(s) | 83 |
| EaeI | YGGCCR | 1 cut(s) | 85 |
| EcoO109I | RGGNCCY | 1 cut(s) | 65 |
| FaeI | CATG | 1 cut(s) | 120 |
| FaiI | YATR | 2 cut(s) | 39, 118 |
| FatI | CATG | 1 cut(s) | 116 |
| HaeIII | GGCC | 3 cut(s) | 66, 87, 193 |
| Hin1II | CATG | 1 cut(s) | 120 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 217 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 1 cut(s) | 133 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 33, 42 |
| HpyF3I | CTNAG | 1 cut(s) | 220 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| Hsp92II | CATG | 1 cut(s) | 120 |
| Kzo9I | GATC | 1 cut(s) | 163 |
| LpnPI | CCDG | 4 cut(s) | 124, 141, 159, 241 |
| LweI | GCATC | 2 cut(s) | 23, 142 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MaeIII | GTNAC | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 165 |
| MboI | GATC | 1 cut(s) | 163 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MhlI | GDGCHC | 1 cut(s) | 135 |
| MlsI | TGGCCA | 1 cut(s) | 87 |
| MluCI | AATT | 1 cut(s) | 186 |
| MluNI | TGGCCA | 1 cut(s) | 87 |
| MnlI | CCTC | 1 cut(s) | 101 |
| Mox20I | TGGCCA | 1 cut(s) | 87 |
| MscI | TGGCCA | 1 cut(s) | 87 |
| Msp20I | TGGCCA | 1 cut(s) | 87 |
| MspA1I | CMGCKG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 33, 42 |
| NdeII | GATC | 1 cut(s) | 163 |
| NlaIII | CATG | 1 cut(s) | 120 |
| NlaIV | GGNNCC | 2 cut(s) | 67, 165 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 173 |
| PspN4I | GGNNCC | 2 cut(s) | 67, 165 |
| PspPI | GGNCC | 1 cut(s) | 65 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| RsaI | GTAC | 1 cut(s) | 115 |
| RsaNI | GTAC | 1 cut(s) | 114 |
| Sau3AI | GATC | 1 cut(s) | 163 |
| Sau96I | GGNCC | 1 cut(s) | 65 |
| SduI | GDGCHC | 1 cut(s) | 135 |
| SetI | ASST | 3 cut(s) | 58, 93, 138 |
| SfaNI | GCATC | 2 cut(s) | 23, 142 |
| Sse9I | AATT | 1 cut(s) | 186 |
| TaaI | ACNGT | 1 cut(s) | 217 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 124 |
| TasI | AATT | 1 cut(s) | 186 |
| TatI | WGTACW | 1 cut(s) | 113 |
| TscAI | CASTG | 2 cut(s) | 135, 220 |
| TspDTI | ATGAA | 1 cut(s) | 223 |
| TspRI | CASTG | 2 cut(s) | 135, 220 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 173 |
| VneI | GTGCAC | 1 cut(s) | 131 |