Rh6AG118900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
17875108 .. 17875389
282 bp
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UTR
Exon/CDS
Intron
Rh6AG118900.1

Sequence Viewer

Length: 282 bp
ATGAAGCACTGGACAGGAGAGAGGGACAATGTTGATGGAGAAGAAAGCGAAAATGACACTGGATCAAATGTGACAGCAGAAGTGATGGACAATGTGAATGGAGAAGGAAGCGGAAATGACAATGGAGTTGGTGAGACAGTAGAAATGAGAGAAAACACTTATGGAGAGGCAAGCATGACTAACAATGGATCCCATGGGGAAGGAGAAGTAAGGGACAACAATGGAGATGGAAGCAGTCATACTGTTGTGCATCCCATCGGAGGGCTTATTCCGTTCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

93

Amino Acids

9.81

Weight (kDa)

4.17

Isoelectric Point (pI)

-5.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017596)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 111
AclWI GGATC 3 cut(s) 70, 183, 196
AfiI CCNNNNNNNGG 2 cut(s) 260, 261
Alw26I GTCTC 1 cut(s) 128
AlwI GGATC 3 cut(s) 70, 183, 196
AsuHPI GGTGA 1 cut(s) 143
BamHI GGATCC 1 cut(s) 188
BarI GAAGNNNNNNTAC 2 cut(s) 223, 255
BccI CCATC 4 cut(s) 29, 79, 221, 263
BcoDI GTCTC 1 cut(s) 128
BmiI GGNNCC 1 cut(s) 190
BmsI GCATC 1 cut(s) 259
BsaJI CCNNGG 1 cut(s) 193
Bsc4I CCNNNNNNNGG 2 cut(s) 260, 261
Bse1I ACTGG 2 cut(s) 14, 64
BseDI CCNNGG 1 cut(s) 193
BseGI GGATG 1 cut(s) 250
BseLI CCNNNNNNNGG 2 cut(s) 260, 261
BseNI ACTGG 2 cut(s) 14, 64
BslFI GGGAC 2 cut(s) 38, 227
BslI CCNNNNNNNGG 2 cut(s) 260, 261
BsmAI GTCTC 1 cut(s) 128
BsmFI GGGAC 2 cut(s) 38, 227
Bsp143I GATC 2 cut(s) 62, 188
Bsp19I CCATGG 1 cut(s) 193
BspACI CCGC 1 cut(s) 111
BspLI GGNNCC 1 cut(s) 190
BspPI GGATC 3 cut(s) 70, 183, 196
BsrI ACTGG 2 cut(s) 14, 64
BssECI CCNNGG 1 cut(s) 193
BssMI GATC 2 cut(s) 62, 188
BssT1I CCWWGG 1 cut(s) 193
Bst4CI ACNGT 2 cut(s) 139, 244
BstC8I GCNNGC 1 cut(s) 172
BstDSI CCRYGG 1 cut(s) 193
BstF5I GGATG 1 cut(s) 250
BstKTI GATC 2 cut(s) 65, 191
BstMAI GTCTC 1 cut(s) 128
BstMBI GATC 2 cut(s) 62, 188
BstX2I RGATCY 1 cut(s) 188
BstYI RGATCY 1 cut(s) 188
BtgI CCRYGG 1 cut(s) 193
BtsCI GGATG 1 cut(s) 250
BtsIMutI CAGTG 2 cut(s) 7, 57
Cac8I GCNNGC 1 cut(s) 172
CviAII CATG 2 cut(s) 175, 194
CviJI RGCY 1 cut(s) 265
CviKI_1 RGCY 1 cut(s) 265
DpnI GATC 2 cut(s) 64, 190
DpnII GATC 2 cut(s) 62, 188
Eco130I CCWWGG 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 193
ErhI CCWWGG 1 cut(s) 193
FaeI CATG 2 cut(s) 178, 197
FaiI YATR 4 cut(s) 162, 176, 195, 240
FaqI GGGAC 2 cut(s) 38, 227
FatI CATG 2 cut(s) 174, 193
FokI GGATG 1 cut(s) 237
Hin1II CATG 2 cut(s) 178, 197
HphI GGTGA 1 cut(s) 143
Hpy188I TCNGA 1 cut(s) 260
HpyAV CCTTC 2 cut(s) 98, 194
HpyCH4III ACNGT 2 cut(s) 139, 244
HpyCH4V TGCA 1 cut(s) 250
Hsp92II CATG 2 cut(s) 178, 197
Kzo9I GATC 2 cut(s) 62, 188
LpnPI CCDG 1 cut(s) 45
LweI GCATC 1 cut(s) 259
MaeIII GTNAC 1 cut(s) 70
MalI GATC 2 cut(s) 64, 190
MboI GATC 2 cut(s) 62, 188
MboII GAAGA 1 cut(s) 53
MflI RGATCY 1 cut(s) 188
MnlI CCTC 3 cut(s) 15, 160, 254
NcoI CCATGG 1 cut(s) 193
NdeII GATC 2 cut(s) 62, 188
NlaIII CATG 2 cut(s) 178, 197
NlaIV GGNNCC 1 cut(s) 190
NmuCI GTSAC 1 cut(s) 70
PspN4I GGNNCC 1 cut(s) 190
PsuI RGATCY 1 cut(s) 188
Sau3AI GATC 2 cut(s) 62, 188
SfaNI GCATC 1 cut(s) 259
SgeI CNNG 6 cut(s) 22, 27, 72, 183, 187, 206
SsiI CCGC 1 cut(s) 111
StyI CCWWGG 1 cut(s) 193
TaaI ACNGT 2 cut(s) 139, 244
TscAI CASTG 2 cut(s) 14, 64
TseFI GTSAC 1 cut(s) 70
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 261
TspRI CASTG 2 cut(s) 14, 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.