tRNA-dihydrouridine(47) synthase NAD(P)( )
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0268431 RchiOBHm_Chr6g0268441 RchiOBHm_Chr6g0271641 |
| rosa_roxburghii | Rroxscaffold_7G00199810 |
| rosa_samantha | Rh6AG161400 Rh6CG159300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 52 |
| AgsI | TTSAA | 3 cut(s) | 134, 219, 261 |
| AluBI | AGCT | 2 cut(s) | 102, 139 |
| AluI | AGCT | 2 cut(s) | 102, 139 |
| Alw26I | GTCTC | 1 cut(s) | 203 |
| AoxI | GGCC | 1 cut(s) | 171 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| BccI | CCATC | 2 cut(s) | 68, 275 |
| BcoDI | GTCTC | 1 cut(s) | 203 |
| BfmI | CTRYAG | 1 cut(s) | 292 |
| BmsI | GCATC | 1 cut(s) | 166 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BsaI | GGTCTC | 1 cut(s) | 203 |
| BsaJI | CCNNGG | 1 cut(s) | 168 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 233, 263 |
| BseDI | CCNNGG | 1 cut(s) | 168 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BshFI | GGCC | 1 cut(s) | 173 |
| BsmAI | GTCTC | 1 cut(s) | 203 |
| BsnI | GGCC | 1 cut(s) | 173 |
| Bso31I | GGTCTC | 1 cut(s) | 203 |
| BspANI | GGCC | 1 cut(s) | 173 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspTNI | GGTCTC | 1 cut(s) | 203 |
| BssECI | CCNNGG | 1 cut(s) | 168 |
| BssT1I | CCWWGG | 1 cut(s) | 168 |
| BstC8I | GCNNGC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstMAI | GTCTC | 1 cut(s) | 203 |
| BstNSI | RCATGY | 1 cut(s) | 212 |
| BstSFI | CTRYAG | 1 cut(s) | 292 |
| BsuRI | GGCC | 1 cut(s) | 173 |
| Cac8I | GCNNGC | 1 cut(s) | 210 |
| Csp6I | GTAC | 1 cut(s) | 51 |
| CviAII | CATG | 5 cut(s) | 18, 36, 202, 209, 232 |
| CviJI | RGCY | 6 cut(s) | 16, 102, 139, 173, 191, 291 |
| CviKI_1 | RGCY | 6 cut(s) | 16, 102, 139, 173, 191, 291 |
| CviQI | GTAC | 1 cut(s) | 51 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| Eco130I | CCWWGG | 1 cut(s) | 168 |
| Eco31I | GGTCTC | 1 cut(s) | 203 |
| EcoT14I | CCWWGG | 1 cut(s) | 168 |
| ErhI | CCWWGG | 1 cut(s) | 168 |
| FaeI | CATG | 5 cut(s) | 21, 39, 205, 212, 235 |
| FaiI | YATR | 8 cut(s) | 12, 19, 27, 37, 57, 203, 210, 233 |
| FatI | CATG | 5 cut(s) | 17, 35, 201, 208, 231 |
| HaeIII | GGCC | 1 cut(s) | 173 |
| Hin1II | CATG | 5 cut(s) | 21, 39, 205, 212, 235 |
| HindIII | AAGCTT | 1 cut(s) | 137 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 165 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy8I | GTNNAC | 1 cut(s) | 165 |
| HpyCH4V | TGCA | 1 cut(s) | 71 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| Hsp92II | CATG | 5 cut(s) | 21, 39, 205, 212, 235 |
| LweI | GCATC | 1 cut(s) | 166 |
| MaeIII | GTNAC | 1 cut(s) | 274 |
| MboII | GAAGA | 1 cut(s) | 108 |
| MluCI | AATT | 3 cut(s) | 214, 225, 265 |
| MseI | TTAA | 2 cut(s) | 119, 298 |
| MslI | CAYNNNNRTG | 1 cut(s) | 60 |
| NlaIII | CATG | 5 cut(s) | 21, 39, 205, 212, 235 |
| NspI | RCATGY | 1 cut(s) | 212 |
| PaeI | GCATGC | 1 cut(s) | 212 |
| RsaI | GTAC | 1 cut(s) | 52 |
| RsaNI | GTAC | 1 cut(s) | 51 |
| RseI | CAYNNNNRTG | 1 cut(s) | 60 |
| SaqAI | TTAA | 2 cut(s) | 119, 298 |
| SetI | ASST | 3 cut(s) | 44, 104, 141 |
| SfaNI | GCATC | 1 cut(s) | 166 |
| SfcI | CTRYAG | 1 cut(s) | 292 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 60 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| SphI | GCATGC | 1 cut(s) | 212 |
| Sse9I | AATT | 3 cut(s) | 214, 225, 265 |
| StyI | CCWWGG | 1 cut(s) | 168 |
| TasI | AATT | 3 cut(s) | 214, 225, 265 |
| Tru1I | TTAA | 2 cut(s) | 119, 298 |
| Tru9I | TTAA | 2 cut(s) | 119, 298 |
| TspDTI | ATGAA | 2 cut(s) | 125, 173 |
| XceI | RCATGY | 1 cut(s) | 212 |