Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007887

Physical Location & Seq

Genomic Coordinates Reverse (-)

52496749 .. 52501411

Gene Structure 4663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25966

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCGAGCTGCTCTCTCTCCACCACCATCTCTTCCTACCCATCACTCCAAACCCTCCTCTTCCCCAAAAAGCTTCCATCTTTCCTCTCTCTTCCCCAAACCCTAACCTCCCCTCACCTCCGCTCCGCCTCCCGCCGCCGCGCGTCCTCCACACGCGCCCAGTCCGACGACAACGGCGCCGACTCCTCCCGCCACTACGATTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGCGTCCGCGCCTCCCGCTTCGCCTCCAATTTCGGCGCCAAGGTCGCCGTCTGCGAGCTCCCCTTCGCCGCCATCTCCTCCGACACCACCGGCGGCGTCGGTGGCACGTGTGTGCTTCGTGGATGTGTGCCCAAGAAGCTACTGGTTTACGCTTCGAAATATACACATGAATTTGATGACAGCATTGGCTATGGGTGGAAGTACGAAACTGAGCCGAAGCATGACTGGAGCACTTTGATGGCTAACAAGAATGCTGAGCTGCAGCGCCTCACTGGTATTTACAAGAACGTGCTCAAGAATGCTAATGTCACTTTGGTCCAAGGCCGCGGAAAGGTAGTGGACCCGCACACGGTTGATGTAGATGGCAAGTTGTATTCTGCTAGACATATACTAATTTCGGTTGGGGGGCGACCGTTTATCCCTGATATTCCTGGAAGTGAGTATGCAATAGATTCTGATGCTGCTCTTGATTTGCCTGACAAACCTGGGAAAATAGCAATAGTTGGTGGTGGATACATTGCCTTGGAGTTTGCTGGTATCTTCAATGGTCTGAGGAGCGATGTCCATGTGTTTATACGCCAAAAGCAAGTTTTGAGGGGTTTTGATGAAGAGATTAGAGGTTTTGTTTCTGAACAGATGTCTGTGAGAGGGATTGAGTTCCATACAGAGGAGTCTCCACAGGCTATCTTAAAATCAGCTGATGGTTCATTTTCCCTGAAAACTAACAAAGGAACAGTTGGAGGGTTCTCACATGTTATGTTTGCAACAGGGCGTAGACCTAACACAAAGAATTTAGGATTGGAGGAGGTAGGGGTGAAAATCGCCAAAAATGGAGCAATAGAGGTTGATGAATTCTCTCGTACATCGGTTCCCTCAATTTGGGCTGTGGGAGATGTTACAGACCGAGTGAATCTGACTCCAGTTGCTTTGATGGAAGGAGGCGCATTAGCAAAAACACTTTTTCTGAATGAGCCCACAAAACCTGATTACAGAGCGATTCCTTCTGCTGTGTTTTCCCAGCCACCCATTGGGCAAGTTGGTCTTTCTGAAGAACAGGCTACAGAACAATATGGTGATGTTGATATCTACACATCAAACTTCAGGCCCATGAAGGCCACTCTCTCAGGGTTGCCAGATCGAGTCTTCATGAAACTTGTAGTGTGTGCAAAGACAAACAAACTTCTGGGTTTGCACATGTGCGGAGAAGATTCACCCGAAATTGTTCAGGGGTTTGCAGTTGCTGTTAAAGCTGGCTTGACAAAGGCAGACTTAGATGCCACGATAGGTATTCACCCGACAGCCGCTGAAGAGTTTGTCACAATGAGGACTCCTACTCGGAAGATCAGAAAAAACCCTCCGTCTCAGGAGAAGCCATCTGATGTGAAAGCTGCCGCTGGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0000305 GO:0003674 GO:0003824 GO:0004362 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0010035 GO:0015036 GO:0015037 GO:0015038 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0017076 GO:0019725 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0042592 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097159 GO:0097237 GO:0097367 GO:0098754 GO:0098869 GO:1901265 GO:1901363 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko04918 map00480 map04918

Pfam Domains

Protein Families

Pyr_redox_2 Pyr_redox_dim

Protein Analysis

545

Amino Acids

58.68

Weight (kDa)

8.53

Isoelectric Point (pI)

39.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	69 - 391	8.3e-65	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	242 - 319	2.3e-21	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim	PF02852	411 - 519	1.8e-34	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54660
fragaria_vesca	FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490
malus_domestica	MD05G1205200.v1.1
prunus_persica	Prupe.8G231700_v2.0.a1
pyrus_communis	pycom05g19140 pycom10g16610
rosa_chinensis	RchiOBHm_Chr6g0289441
rosa_laevigata	RLG00000012301
rosa_multiflora	Rmu_co8022184.1_g000001 Rmu_sc0001527.1_g000037
rosa_roxburghii	Rroxscaffold_7G00179210
rosa_rugosa	Rorug06G0203500 Rorug06G0203600 Rorug06G0203700
rosa_samantha	Rh6AG314500 Rh6BG322200 Rh6DG314100
rosa_wichuraiana	Rw6G027190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	176, 221, 269
AccB7I	CCANNNNNTGG	1 cut(s)	1262
AccBSI	CCGCTC	1 cut(s)	123
AccI	GTMKAC	1 cut(s)	1009
AccII	CGCG	5 cut(s)	141, 143, 156, 243, 561
AcsI	RAATTY	3 cut(s)	404, 1024, 1085
AcuI	CTGAAG	3 cut(s)	1302, 1318, 1560
AcvI	CACGTG	1 cut(s)	342
AcyI	GRCGYC	5 cut(s)	177, 222, 237, 270, 330
AfaI	GTAC	2 cut(s)	437, 1096
AfiI	CCNNNNNNNGG	5 cut(s)	565, 583, 901, 1113, 1262
AflIII	ACRYGT	3 cut(s)	341, 985, 1428
AgsI	TTSAA	1 cut(s)	778
AjnI	CCWGG	2 cut(s)	664, 718
AjuI	GAANNNNNNNTTGG	2 cut(s)	1016, 1048
AleI	CACNNNNGTG	1 cut(s)	344
AluBI	AGCT	8 cut(s)	9, 73, 292, 373, 493, 932, 1484, 1622
AluI	AGCT	8 cut(s)	9, 73, 292, 373, 493, 932, 1484, 1622
Alw21I	GWGCWC	3 cut(s)	294, 467, 528
Alw26I	GTCTC	2 cut(s)	912, 1599
AlwNI	CAGNNNCTG	2 cut(s)	1475, 1538
AoxI	GGCC	3 cut(s)	556, 1337, 1347
ApeKI	GCWGC	6 cut(s)	9, 228, 493, 496, 695, 1622
ApoI	RAATTY	3 cut(s)	404, 1024, 1085
Asp700I	GAANNNNTTC	1 cut(s)	1455
AspLEI	GCGC	8 cut(s)	143, 158, 179, 224, 245, 272, 501, 1178
AspS9I	GGNCC	3 cut(s)	550, 574, 1338
AsuHPI	GGTGA	6 cut(s)	107, 205, 1060, 1319, 1437, 1517
AsuII	TTCGAA	1 cut(s)	389
AvaII	GGWCC	2 cut(s)	550, 574
BaeGI	GKGCMC	1 cut(s)	366
BanI	GGYRCC	3 cut(s)	176, 221, 269
BanII	GRGCYC	2 cut(s)	294, 1209
BbrPI	CACGTG	1 cut(s)	342
BbsI	GAAGAC	1 cut(s)	1369
Bbv12I	GWGCWC	3 cut(s)	294, 467, 528
BbvI	GCAGC	5 cut(s)	240, 480, 508, 682, 1609
BceAI	ACGGC	2 cut(s)	190, 266
BciT130I	CCWGG	2 cut(s)	666, 720
BciVI	GTATCC	1 cut(s)	740
BcoDI	GTCTC	2 cut(s)	912, 1599
BfaI	CTAG	1 cut(s)	615
BfmI	CTRYAG	2 cut(s)	494, 1293
BfoI	RGCGCY	4 cut(s)	180, 225, 273, 502
BfuI	GTATCC	1 cut(s)	740
BlpI	GCTNAGC	1 cut(s)	489
Bme1390I	CCNGG	2 cut(s)	666, 720
Bme18I	GGWCC	2 cut(s)	550, 574
BmgT120I	GGNCC	3 cut(s)	550, 574, 1338
BmiI	GGNNCC	5 cut(s)	178, 223, 271, 576, 1104
BmrFI	CCNGG	2 cut(s)	666, 720
BmrI	ACTGGG	1 cut(s)	154
BmsI	GCATC	2 cut(s)	682, 1498
BmuI	ACTGGG	1 cut(s)	154
BpiI	GAAGAC	1 cut(s)	1369
BplI	GAGNNNNNCTC	1 cut(s)	30
BpmI	CTGGAG	2 cut(s)	481, 1137
Bpu1102I	GCTNAGC	1 cut(s)	489
Bpu14I	TTCGAA	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	512
BsaAI	YACGTR	1 cut(s)	342
BsaHI	GRCGYC	5 cut(s)	177, 222, 237, 270, 330
BsaJI	CCNNGG	5 cut(s)	273, 553, 559, 719, 756
BsaXI	ACNNNNNCTCC	2 cut(s)	107, 137
Bsc4I	CCNNNNNNNGG	5 cut(s)	565, 583, 901, 1113, 1262
Bse118I	RCCGGY	2 cut(s)	224, 323
Bse1I	ACTGG	5 cut(s)	160, 381, 464, 511, 1154
Bse3DI	GCAATG	1 cut(s)	750
BseBI	CCWGG	2 cut(s)	666, 720
BseDI	CCNNGG	5 cut(s)	273, 553, 559, 719, 756
BseGI	GGATG	1 cut(s)	362
BseLI	CCNNNNNNNGG	5 cut(s)	565, 583, 901, 1113, 1262
BseMI	GCAATG	1 cut(s)	750
BseMII	CTCAG	5 cut(s)	435, 480, 776, 1371, 1610
BseNI	ACTGG	5 cut(s)	160, 381, 464, 511, 1154
BseRI	GAGGAG	6 cut(s)	47, 175, 301, 802, 917, 1052
BseSI	GKGCMC	1 cut(s)	366
BseXI	GCAGC	5 cut(s)	240, 480, 508, 682, 1609
BseYI	CCCAGC	1 cut(s)	1251
Bsh1236I	CGCG	5 cut(s)	141, 143, 156, 243, 561
Bsh1285I	CGRYCG	1 cut(s)	647
BshFI	GGCC	3 cut(s)	558, 1339, 1349
BshNI	GGYRCC	3 cut(s)	176, 221, 269
BsiEI	CGRYCG	1 cut(s)	647
BsiHKAI	GWGCWC	3 cut(s)	294, 467, 528
BsiSI	CCGG	2 cut(s)	225, 324
BslI	CCNNNNNNNGG	5 cut(s)	565, 583, 901, 1113, 1262
BsmAI	GTCTC	2 cut(s)	912, 1599
BsmBI	CGTCTC	1 cut(s)	1599
BsmI	GAATGC	2 cut(s)	490, 538
BsnI	GGCC	3 cut(s)	558, 1339, 1349
Bsp119I	TTCGAA	1 cut(s)	389
Bsp1286I	GDGCHC	5 cut(s)	294, 366, 467, 528, 1209
Bsp143I	GATC	2 cut(s)	1369, 1575
Bsp1720I	GCTNAGC	1 cut(s)	489
BspANI	GGCC	3 cut(s)	558, 1339, 1349
BspCNI	CTCAG	5 cut(s)	436, 481, 777, 1370, 1609
BspFNI	CGCG	5 cut(s)	141, 143, 156, 243, 561
BspHI	TCATGA	1 cut(s)	1380
BspLI	GGNNCC	5 cut(s)	178, 223, 271, 576, 1104
BspMAI	CTGCAG	1 cut(s)	498
BspT104I	TTCGAA	1 cut(s)	389
BspT107I	GGYRCC	3 cut(s)	176, 221, 269
BsrBI	CCGCTC	1 cut(s)	123
BsrDI	GCAATG	1 cut(s)	750
BsrFI	RCCGGY	2 cut(s)	224, 323
BsrI	ACTGG	5 cut(s)	160, 381, 464, 511, 1154
BssAI	RCCGGY	2 cut(s)	224, 323
BssECI	CCNNGG	5 cut(s)	273, 553, 559, 719, 756
BssMI	GATC	2 cut(s)	1369, 1575
BssNI	GRCGYC	5 cut(s)	177, 222, 237, 270, 330
BssT1I	CCWWGG	3 cut(s)	273, 553, 756
Bst2UI	CCWGG	2 cut(s)	666, 720
Bst4CI	ACNGT	3 cut(s)	586, 648, 970
Bst6I	CTCTTC	6 cut(s)	37, 65, 96, 215, 837, 1536
BstACI	GRCGYC	5 cut(s)	177, 222, 237, 270, 330
BstBAI	YACGTR	1 cut(s)	342
BstBI	TTCGAA	1 cut(s)	389
BstC8I	GCNNGC	4 cut(s)	7, 226, 290, 1486
BstDEI	CTNAG	6 cut(s)	444, 489, 785, 1357, 1504, 1596
BstDSI	CCRYGG	1 cut(s)	559
BstF5I	GGATG	1 cut(s)	362
BstFNI	CGCG	5 cut(s)	141, 143, 156, 243, 561
BstH2I	RGCGCY	4 cut(s)	180, 225, 273, 502
BstHHI	GCGC	8 cut(s)	143, 158, 179, 224, 245, 272, 501, 1178
BstKTI	GATC	2 cut(s)	1372, 1578
BstMAI	GTCTC	2 cut(s)	912, 1599
BstMBI	GATC	2 cut(s)	1369, 1575
BstMCI	CGRYCG	1 cut(s)	647
BstMWI	GCNNNNNNNGC	8 cut(s)	228, 234, 240, 249, 278, 336, 370, 1481
BstNI	CCWGG	2 cut(s)	666, 720
BstNSI	RCATGY	2 cut(s)	989, 1432
BstSCI	CCNGG	2 cut(s)	664, 718
BstSFI	CTRYAG	2 cut(s)	494, 1293
BstSLI	GKGCMC	1 cut(s)	366
BstUI	CGCG	5 cut(s)	141, 143, 156, 243, 561
BstV1I	GCAGC	5 cut(s)	240, 480, 508, 682, 1609
BstV2I	GAAGAC	1 cut(s)	1369
BsuI	GTATCC	1 cut(s)	740
BsuRI	GGCC	3 cut(s)	558, 1339, 1349
BtgI	CCRYGG	1 cut(s)	559
BtgZI	GCGATG	1 cut(s)	807
BtsCI	GGATG	1 cut(s)	362
BtsIMutI	CAGTG	1 cut(s)	504
Cac8I	GCNNGC	4 cut(s)	7, 226, 290, 1486
CaiI	CAGNNNCTG	2 cut(s)	1475, 1538
CciI	TCATGA	1 cut(s)	1380
CfoI	GCGC	8 cut(s)	143, 158, 179, 224, 245, 272, 501, 1178
Cfr10I	RCCGGY	2 cut(s)	224, 323
Cfr13I	GGNCC	3 cut(s)	550, 574, 1338
Cfr42I	CCGCGG	1 cut(s)	562
CseI	GACGC	3 cut(s)	132, 226, 319
Csp6I	GTAC	2 cut(s)	436, 1095
CviAII	CATG	7 cut(s)	401, 455, 800, 986, 1342, 1381, 1429
CviQI	GTAC	2 cut(s)	436, 1095
DdeI	CTNAG	6 cut(s)	444, 489, 785, 1357, 1504, 1596
DinI	GGCGCC	3 cut(s)	178, 223, 271
DpnI	GATC	2 cut(s)	1371, 1577
DpnII	GATC	2 cut(s)	1369, 1575
Eam1104I	CTCTTC	6 cut(s)	37, 65, 96, 215, 837, 1536
EarI	CTCTTC	6 cut(s)	37, 65, 96, 215, 837, 1536
EciI	GGCGGA	1 cut(s)	115
Ecl136II	GAGCTC	1 cut(s)	292
Eco130I	CCWWGG	3 cut(s)	273, 553, 756
Eco24I	GRGCYC	2 cut(s)	294, 1209
Eco32I	GATATC	1 cut(s)	1318
Eco47I	GGWCC	2 cut(s)	550, 574
Eco53kI	GAGCTC	1 cut(s)	292
Eco57I	CTGAAG	3 cut(s)	1302, 1318, 1560
Eco72I	CACGTG	1 cut(s)	342
EcoICRI	GAGCTC	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	1085
EcoRII	CCWGG	2 cut(s)	664, 718
EcoRV	GATATC	1 cut(s)	1318
EcoT14I	CCWWGG	3 cut(s)	273, 553, 756
EcoT38I	GRGCYC	2 cut(s)	294, 1209
EgeI	GGCGCC	3 cut(s)	178, 223, 271
EheI	GGCGCC	3 cut(s)	178, 223, 271
ErhI	CCWWGG	3 cut(s)	273, 553, 756
Esp3I	CGTCTC	1 cut(s)	1599
FaeI	CATG	7 cut(s)	404, 458, 803, 989, 1345, 1384, 1432
FalI	AAGNNNNNCTT	4 cut(s)	1260, 1292, 1487, 1519
FatI	CATG	7 cut(s)	400, 454, 799, 985, 1341, 1380, 1428
FauI	CCCGC	4 cut(s)	140, 197, 257, 585
FblI	GTMKAC	1 cut(s)	1009
FokI	GGATG	1 cut(s)	369
FriOI	GRGCYC	2 cut(s)	294, 1209
FspBI	CTAG	1 cut(s)	615
GlaI	GCGC	8 cut(s)	142, 157, 178, 223, 244, 271, 500, 1177
GsaI	CCCAGC	1 cut(s)	1255
GsuI	CTGGAG	2 cut(s)	481, 1137
HaeII	RGCGCY	4 cut(s)	180, 225, 273, 502
HaeIII	GGCC	3 cut(s)	558, 1339, 1349
HapII	CCGG	2 cut(s)	225, 324
HgaI	GACGC	3 cut(s)	132, 226, 319
HhaI	GCGC	8 cut(s)	143, 158, 179, 224, 245, 272, 501, 1178
Hin1I	GRCGYC	5 cut(s)	177, 222, 237, 270, 330
Hin1II	CATG	7 cut(s)	404, 458, 803, 989, 1345, 1384, 1432
Hin6I	GCGC	8 cut(s)	141, 156, 177, 222, 243, 270, 499, 1176
HinP1I	GCGC	8 cut(s)	141, 156, 177, 222, 243, 270, 499, 1176
HindIII	AAGCTT	1 cut(s)	71
HinfI	GANTC	9 cut(s)	182, 686, 905, 1144, 1150, 1231, 1374, 1442, 1561
HpaII	CCGG	2 cut(s)	225, 324
HphI	GGTGA	6 cut(s)	107, 205, 1060, 1319, 1437, 1517
Hpy166II	GTNNAC	3 cut(s)	382, 574, 1010
Hpy188III	TCNNGA	4 cut(s)	529, 701, 1381, 1598
Hpy8I	GTNNAC	3 cut(s)	382, 574, 1010
Hpy99I	CGWCG	2 cut(s)	170, 335
HpyAV	CCTTC	4 cut(s)	307, 1163, 1245, 1339
HpyCH4III	ACNGT	3 cut(s)	586, 648, 970
HpyCH4IV	ACGT	2 cut(s)	341, 522
HpyCH4V	TGCA	6 cut(s)	496, 680, 998, 1400, 1426, 1469
HpyF10VI	GCNNNNNNNGC	8 cut(s)	228, 234, 240, 249, 278, 336, 370, 1481
HpyF3I	CTNAG	6 cut(s)	444, 489, 785, 1357, 1504, 1596
HpySE526I	ACGT	2 cut(s)	341, 522
Hsp92I	GRCGYC	5 cut(s)	177, 222, 237, 270, 330
Hsp92II	CATG	7 cut(s)	404, 458, 803, 989, 1345, 1384, 1432
HspAI	GCGC	8 cut(s)	141, 156, 177, 222, 243, 270, 499, 1176
KasI	GGCGCC	3 cut(s)	176, 221, 269
KroI	GCCGGC	1 cut(s)	224
KroNI	GCCGGC	1 cut(s)	226
KspI	CCGCGG	1 cut(s)	562
Kzo9I	GATC	2 cut(s)	1369, 1575
LmnI	GCTCC	5 cut(s)	128, 297, 462, 789, 1067
Lsp1109I	GCAGC	5 cut(s)	240, 480, 508, 682, 1609
LweI	GCATC	2 cut(s)	682, 1498
MaeI	CTAG	1 cut(s)	615
MaeII	ACGT	2 cut(s)	341, 522
MaeIII	GTNAC	3 cut(s)	541, 1129, 1549
MalI	GATC	2 cut(s)	1371, 1577
MbiI	CCGCTC	1 cut(s)	123
MboI	GATC	2 cut(s)	1369, 1575
MhlI	GDGCHC	5 cut(s)	294, 366, 467, 528, 1209
MluCI	AATT	7 cut(s)	262, 404, 627, 1024, 1085, 1110, 1452
Mly113I	GGCGCC	3 cut(s)	177, 222, 270
MlyI	GAGTC	5 cut(s)	176, 914, 1144, 1383, 1555
MmeI	TCCRAC	3 cut(s)	189, 339, 952
MroNI	GCCGGC	1 cut(s)	224
MroXI	GAANNNNTTC	1 cut(s)	1455
MseI	TTAA	2 cut(s)	923, 1479
MslI	CAYNNNNRTG	2 cut(s)	344, 470
MspA1I	CMGCKG	5 cut(s)	231, 561, 932, 1538, 1628
MspI	CCGG	2 cut(s)	225, 324
MspR9I	CCNGG	2 cut(s)	666, 720
Mva1269I	GAATGC	2 cut(s)	490, 538
MvaI	CCWGG	2 cut(s)	666, 720
MvnI	CGCG	5 cut(s)	141, 143, 156, 243, 561
MwoI	GCNNNNNNNGC	8 cut(s)	228, 234, 240, 249, 278, 336, 370, 1481
NaeI	GCCGGC	1 cut(s)	226
NarI	GGCGCC	3 cut(s)	177, 222, 270
NdeII	GATC	2 cut(s)	1369, 1575
NgoMIV	GCCGGC	1 cut(s)	224
NlaIII	CATG	7 cut(s)	404, 458, 803, 989, 1345, 1384, 1432
NlaIV	GGNNCC	5 cut(s)	178, 223, 271, 576, 1104
NmuCI	GTSAC	2 cut(s)	541, 1549
NspI	RCATGY	2 cut(s)	989, 1432
NspV	TTCGAA	1 cut(s)	389
OliI	CACNNNNGTG	1 cut(s)	344
PagI	TCATGA	1 cut(s)	1380
PciI	ACATGT	2 cut(s)	985, 1428
PcsI	WCGNNNNNNNCGW	1 cut(s)	285
PctI	GAATGC	2 cut(s)	490, 538
PdiI	GCCGGC	1 cut(s)	226
PdmI	GAANNNNTTC	1 cut(s)	1455
PfeI	GAWTC	4 cut(s)	686, 1144, 1231, 1442
PflMI	CCANNNNNTGG	1 cut(s)	1262
PfoI	TCCNGGA	1 cut(s)	664
PleI	GAGTC	5 cut(s)	176, 913, 1144, 1382, 1555
PluTI	GGCGCC	3 cut(s)	180, 225, 273
PmaCI	CACGTG	1 cut(s)	342
PmlI	CACGTG	1 cut(s)	342
PpsI	GAGTC	5 cut(s)	176, 913, 1144, 1382, 1555
Ppu21I	YACGTR	1 cut(s)	342
PscI	ACATGT	2 cut(s)	985, 1428
Psp124BI	GAGCTC	1 cut(s)	294
Psp6I	CCWGG	2 cut(s)	664, 718
PspCI	CACGTG	1 cut(s)	342
PspFI	CCCAGC	1 cut(s)	1251
PspGI	CCWGG	2 cut(s)	664, 718
PspN4I	GGNNCC	5 cut(s)	178, 223, 271, 576, 1104
PspPI	GGNCC	3 cut(s)	550, 574, 1338
PstI	CTGCAG	1 cut(s)	498
PstNI	CAGNNNCTG	2 cut(s)	1475, 1538
PvuII	CAGCTG	1 cut(s)	932
RsaI	GTAC	2 cut(s)	437, 1096
RsaNI	GTAC	2 cut(s)	436, 1095
RseI	CAYNNNNRTG	2 cut(s)	344, 470
SacI	GAGCTC	1 cut(s)	294
SacII	CCGCGG	1 cut(s)	562
SaqAI	TTAA	2 cut(s)	923, 1479
Sau3AI	GATC	2 cut(s)	1369, 1575
Sau96I	GGNCC	3 cut(s)	550, 574, 1338
SchI	GAGTC	5 cut(s)	176, 914, 1144, 1383, 1555
ScrFI	CCNGG	2 cut(s)	666, 720
SduI	GDGCHC	5 cut(s)	294, 366, 467, 528, 1209
SfaNI	GCATC	2 cut(s)	682, 1498
SfcI	CTRYAG	2 cut(s)	494, 1293
SfoI	GGCGCC	3 cut(s)	178, 223, 271
Sfr303I	CCGCGG	1 cut(s)	562
SfuI	TTCGAA	1 cut(s)	389
SgrAI	CRCCGGYG	1 cut(s)	323
SgrBI	CCGCGG	1 cut(s)	562
SinI	GGWCC	2 cut(s)	550, 574
SmiMI	CAYNNNNRTG	2 cut(s)	344, 470
SmlI	CTYRAG	1 cut(s)	527
SmoI	CTYRAG	1 cut(s)	527
Sse9I	AATT	7 cut(s)	262, 404, 627, 1024, 1085, 1110, 1452
SspDI	GGCGCC	3 cut(s)	176, 221, 269
SspMI	CTAG	1 cut(s)	615
SstI	GAGCTC	1 cut(s)	294
StyD4I	CCNGG	2 cut(s)	664, 718
StyI	CCWWGG	3 cut(s)	273, 553, 756
TaaI	ACNGT	3 cut(s)	586, 648, 970
TaiI	ACGT	2 cut(s)	344, 525
TaqI	TCGA	3 cut(s)	204, 389, 1372
TaqII	GACCGA	1 cut(s)	1152
TasI	AATT	7 cut(s)	262, 404, 627, 1024, 1085, 1110, 1452
TauI	GCSGC	9 cut(s)	138, 141, 234, 237, 305, 330, 561, 1538, 1628
TfiI	GAWTC	4 cut(s)	686, 1144, 1231, 1442
Tru1I	TTAA	2 cut(s)	923, 1479
Tru9I	TTAA	2 cut(s)	923, 1479
TscAI	CASTG	1 cut(s)	511
TseFI	GTSAC	2 cut(s)	541, 1549
TseI	GCWGC	6 cut(s)	9, 228, 493, 496, 695, 1622
Tsp45I	GTSAC	2 cut(s)	541, 1549
TspDTI	ATGAA	7 cut(s)	417, 855, 930, 1098, 1358, 1369, 1397
TspGWI	ACGGA	1 cut(s)	1581
TspRI	CASTG	1 cut(s)	511
Van91I	CCANNNNNTGG	1 cut(s)	1262
VpaK11BI	GGWCC	2 cut(s)	550, 574
XapI	RAATTY	3 cut(s)	404, 1024, 1085
XceI	RCATGY	2 cut(s)	989, 1432
XcmI	CCANNNNNNNNNTGG	2 cut(s)	373, 1259
XmiI	GTMKAC	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	1455
XspI	CTAG	1 cut(s)	615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.