Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007887

Physical Location & Seq

Genomic Coordinates Forward (+)

18852575 .. 18856446

Gene Structure 3872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00179210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGCGAGTTGCTCCCTCTCCACCACCCCAAAGCTCACCACCATCTCTTCCTACCCATCACTCCAAACCCTCCTCTTCCCCAAAAAGCTTCCATCTTTCCTCTCTCTTCCCCAAACCCTGACCTCCCCTCACCTCCGCTCCGCCTCCCGCCGCCGCGCGTCCTCCACACGCGCCCAGTCCGACAACGGCGCCGACTCCTCCCGCCACTACGATTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGCGTCCGCGCCTCCCGCTTCGCCTCCAATTTCGGCGCCAAGGTCGCCGTCTGCGAGCTCCCCTTCTCCACCATCTCCTCCGAGACCACCGGCGGCGTCGGCGGCACGTGTGTGCTTCGTGGATGTGTGCCCAAGAAGCTACTGGTTTACGCTTCGAAATATACACATGAATTTGATGACAGCATTGGCTATGGGTGGAAGTACGAAACTGAGCCGAAGCATGACTGGAGCACATTGATGGCTAACAAGTATGCTGAGCTGCAGCGCCTCACTGGTATTTACAAGAATGTGCTCAAGAATGCTAATGTCACTTTGGTCCAAGGCCGCGGAAAGGTAGTGGACCCGCACACGGTTGATGTAGATGGGAAGTTGTATTCTGCTAGACATATACTAATTTCGGTTGGGGGGCGACCCTTTATTCCCGATATTCCTGGAAGTGAGTACGCAATAGATTCTGATGCTGCTCTTGATTTGCCTGAGAAGCCGGGGAAAATAGCAATTGTTGGTGGTGGATACATTGCATTGGAGTTTGCTGGTATCTTCAATGGTCTGAGGAGTGATGTCCATGTGTTTATACGGCAAAAGCAAGTTTTGAGGGGTTTTGATGAAGAGATTAGAGGTTTTGTTTCTGAACAGATGTCTGTGAGAGGGATTGAGTTCCATACAGAGGAGTCTCCCCAGGCTATCTTAAAATCAGCTGATGGTTCATTTTCCCTGAAAACTAACAAAGGAACAGTTGGAGGGTTCTCACATGTTATGTTTGCAACAGGGCGTAGACCTAATACAAAGAATTTAGGATTGGAGGAGGTAGGGGTGAAAATTGCCAAAAATGGAGCAATAGAGGTTGATGAATTCTCTCGTACCTCGGTTCCCTCAATTTGGGCTGTGGGAGATGTTACAGACCGAGTGAATCTGACTCCAGTTGCTTTGATGGAAGGAGGCGCATTAGCAAAAACACTTTTTCTGAATGAGCCCACAAAACCTGATTACAGCGCGATTCCTTCTGCTGTGTTTTCCCAGCCACCCATTGGGCAAGTTGGTCTTTCTGAAGAACAGGCTACAGAACAATATGGTGATGTTGATATCTACACATCAAACTTCAGGCCCATGAAGGCCACTCTCTCAGGGTTGCCGGATCGAGTCTTCATGAAACTTATAGTGTGTGCAAAGACAAACAAACTTCTGGGTTTGCACATGTGCGGAGAAGATTCACCCGAAATTGTTCAGGGGTTTGCAGTTGCTGTTAAAGCTGGCTTGACAAAGGCAGACTTAGATGCCACGATAGGTATTCACCCGACAGCCGCTGAAGAGTTTGTCACAATGAGGACTCCTACGCGGAAGATCAGAAAAAACCCTCCGTCTCAGGAGAAGCCATCTGATGTGAAAGCTGCCGCTGGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0000305 GO:0003674 GO:0003824 GO:0004362 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0010035 GO:0015036 GO:0015037 GO:0015038 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0017076 GO:0019725 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0042592 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097159 GO:0097237 GO:0097367 GO:0098754 GO:0098869 GO:1901265 GO:1901363 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko04918 map00480 map04918

Pfam Domains

Protein Families

Pyr_redox_2 Pyr_redox_dim

Protein Analysis

549

Amino Acids

59.17

Weight (kDa)

8.66

Isoelectric Point (pI)

41.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	73 - 395	6.5e-65	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	246 - 323	2.3e-21	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim	PF02852	415 - 523	2e-34	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54660
fragaria_vesca	FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490
malus_domestica	MD05G1205200.v1.1
prunus_persica	Prupe.8G231700_v2.0.a1
pyrus_communis	pycom05g19140 pycom10g16610
rosa_chinensis	RchiOBHm_Chr6g0289441
rosa_laevigata	RLG00000012301
rosa_multiflora	Rmu_co8022184.1_g000001 Rmu_sc0001527.1_g000037
rosa_roxburghii	Rroxscaffold_7G00179210
rosa_rugosa	Rorug06G0203500 Rorug06G0203600 Rorug06G0203700
rosa_samantha	Rh6AG314500 Rh6BG322200 Rh6DG314100
rosa_wichuraiana	Rw6G027190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	188, 233, 281
AccB7I	CCANNNNNTGG	1 cut(s)	1274
AccBSI	CCGCTC	1 cut(s)	138
AccI	GTMKAC	1 cut(s)	1021
AccII	CGCG	7 cut(s)	156, 158, 171, 255, 573, 1241, 1582
AclWI	GGATC	1 cut(s)	1389
AcsI	RAATTY	3 cut(s)	416, 1036, 1097
AcuI	CTGAAG	3 cut(s)	1314, 1330, 1572
AcvI	CACGTG	1 cut(s)	354
AcyI	GRCGYC	5 cut(s)	189, 234, 249, 282, 342
AfaI	GTAC	3 cut(s)	449, 689, 1108
AfiI	CCNNNNNNNGG	5 cut(s)	577, 595, 913, 1125, 1274
AflIII	ACRYGT	3 cut(s)	353, 997, 1440
AgsI	TTSAA	1 cut(s)	790
AjnI	CCWGG	2 cut(s)	676, 924
AjuI	GAANNNNNNNTTGG	2 cut(s)	1028, 1060
AleI	CACNNNNGTG	1 cut(s)	356
AluBI	AGCT	8 cut(s)	34, 88, 304, 385, 505, 944, 1496, 1634
AluI	AGCT	8 cut(s)	34, 88, 304, 385, 505, 944, 1496, 1634
Alw21I	GWGCWC	3 cut(s)	306, 479, 540
Alw26I	GTCTC	3 cut(s)	323, 924, 1611
AlwI	GGATC	1 cut(s)	1389
AlwNI	CAGNNNCTG	2 cut(s)	1487, 1550
AoxI	GGCC	3 cut(s)	568, 1349, 1359
ApeKI	GCWGC	5 cut(s)	240, 505, 508, 707, 1634
ApoI	RAATTY	3 cut(s)	416, 1036, 1097
Asp700I	GAANNNNTTC	1 cut(s)	1467
AspLEI	GCGC	9 cut(s)	158, 173, 191, 236, 257, 284, 513, 1190, 1241
AspS9I	GGNCC	3 cut(s)	562, 586, 1350
AsuC2I	CCSGG	1 cut(s)	732
AsuHPI	GGTGA	7 cut(s)	28, 122, 217, 1072, 1331, 1449, 1529
AsuII	TTCGAA	1 cut(s)	401
AvaII	GGWCC	2 cut(s)	562, 586
BaeGI	GKGCMC	1 cut(s)	378
BanI	GGYRCC	3 cut(s)	188, 233, 281
BanII	GRGCYC	2 cut(s)	306, 1221
BbrPI	CACGTG	1 cut(s)	354
BbsI	GAAGAC	1 cut(s)	1381
Bbv12I	GWGCWC	3 cut(s)	306, 479, 540
BbvI	GCAGC	5 cut(s)	252, 492, 520, 694, 1621
BceAI	ACGGC	3 cut(s)	202, 278, 839
BciT130I	CCWGG	2 cut(s)	678, 926
BciVI	GTATCC	1 cut(s)	752
BcnI	CCSGG	1 cut(s)	732
BcoDI	GTCTC	3 cut(s)	323, 924, 1611
BfaI	CTAG	1 cut(s)	627
BfmI	CTRYAG	2 cut(s)	506, 1305
BfoI	RGCGCY	4 cut(s)	192, 237, 285, 514
BfuI	GTATCC	1 cut(s)	752
BlpI	GCTNAGC	1 cut(s)	501
Bme1390I	CCNGG	3 cut(s)	678, 732, 926
Bme18I	GGWCC	2 cut(s)	562, 586
BmgT120I	GGNCC	3 cut(s)	562, 586, 1350
BmiI	GGNNCC	5 cut(s)	190, 235, 283, 588, 1116
BmrFI	CCNGG	3 cut(s)	678, 732, 926
BmrI	ACTGGG	1 cut(s)	169
BmsI	GCATC	2 cut(s)	694, 1510
BmuI	ACTGGG	1 cut(s)	169
BpiI	GAAGAC	1 cut(s)	1381
BpmI	CTGGAG	2 cut(s)	493, 1149
Bpu1102I	GCTNAGC	1 cut(s)	501
Bpu14I	TTCGAA	1 cut(s)	401
BpuEI	CTTGAG	1 cut(s)	524
BpuMI	CCSGG	1 cut(s)	732
BsaAI	YACGTR	1 cut(s)	354
BsaHI	GRCGYC	5 cut(s)	189, 234, 249, 282, 342
BsaI	GGTCTC	1 cut(s)	323
BsaJI	CCNNGG	6 cut(s)	285, 565, 571, 731, 924, 1110
BsaXI	ACNNNNNCTCC	2 cut(s)	122, 152
Bsc4I	CCNNNNNNNGG	5 cut(s)	577, 595, 913, 1125, 1274
Bse118I	RCCGGY	2 cut(s)	236, 335
Bse1I	ACTGG	5 cut(s)	175, 393, 476, 523, 1166
Bse3DI	GCAATG	1 cut(s)	762
BseBI	CCWGG	2 cut(s)	678, 926
BseDI	CCNNGG	6 cut(s)	285, 565, 571, 731, 924, 1110
BseGI	GGATG	1 cut(s)	374
BseLI	CCNNNNNNNGG	5 cut(s)	577, 595, 913, 1125, 1274
BseMI	GCAATG	1 cut(s)	762
BseMII	CTCAG	6 cut(s)	447, 492, 714, 788, 1383, 1622
BseNI	ACTGG	5 cut(s)	175, 393, 476, 523, 1166
BseRI	GAGGAG	6 cut(s)	62, 187, 313, 814, 929, 1064
BseSI	GKGCMC	1 cut(s)	378
BseXI	GCAGC	5 cut(s)	252, 492, 520, 694, 1621
BseYI	CCCAGC	1 cut(s)	1263
Bsh1236I	CGCG	7 cut(s)	156, 158, 171, 255, 573, 1241, 1582
BshFI	GGCC	3 cut(s)	570, 1351, 1361
BshNI	GGYRCC	3 cut(s)	188, 233, 281
BsiHKAI	GWGCWC	3 cut(s)	306, 479, 540
BsiSI	CCGG	4 cut(s)	237, 336, 731, 1379
BslI	CCNNNNNNNGG	5 cut(s)	577, 595, 913, 1125, 1274
BsmAI	GTCTC	3 cut(s)	323, 924, 1611
BsmBI	CGTCTC	1 cut(s)	1611
BsmI	GAATGC	1 cut(s)	550
BsnI	GGCC	3 cut(s)	570, 1351, 1361
Bso31I	GGTCTC	1 cut(s)	323
Bsp119I	TTCGAA	1 cut(s)	401
Bsp1286I	GDGCHC	5 cut(s)	306, 378, 479, 540, 1221
Bsp143I	GATC	2 cut(s)	1381, 1587
Bsp1720I	GCTNAGC	1 cut(s)	501
BspANI	GGCC	3 cut(s)	570, 1351, 1361
BspCNI	CTCAG	6 cut(s)	448, 493, 715, 789, 1382, 1621
BspFNI	CGCG	7 cut(s)	156, 158, 171, 255, 573, 1241, 1582
BspHI	TCATGA	1 cut(s)	1392
BspLI	GGNNCC	5 cut(s)	190, 235, 283, 588, 1116
BspMAI	CTGCAG	1 cut(s)	510
BspPI	GGATC	1 cut(s)	1389
BspT104I	TTCGAA	1 cut(s)	401
BspT107I	GGYRCC	3 cut(s)	188, 233, 281
BspTNI	GGTCTC	1 cut(s)	323
BsrBI	CCGCTC	1 cut(s)	138
BsrDI	GCAATG	1 cut(s)	762
BsrFI	RCCGGY	2 cut(s)	236, 335
BsrI	ACTGG	5 cut(s)	175, 393, 476, 523, 1166
BssAI	RCCGGY	2 cut(s)	236, 335
BssECI	CCNNGG	6 cut(s)	285, 565, 571, 731, 924, 1110
BssMI	GATC	2 cut(s)	1381, 1587
BssNI	GRCGYC	5 cut(s)	189, 234, 249, 282, 342
BssT1I	CCWWGG	2 cut(s)	285, 565
Bst2UI	CCWGG	2 cut(s)	678, 926
Bst4CI	ACNGT	2 cut(s)	598, 982
Bst6I	CTCTTC	6 cut(s)	52, 80, 111, 227, 849, 1548
BstACI	GRCGYC	5 cut(s)	189, 234, 249, 282, 342
BstBAI	YACGTR	1 cut(s)	354
BstBI	TTCGAA	1 cut(s)	401
BstC8I	GCNNGC	3 cut(s)	238, 302, 1498
BstDEI	CTNAG	7 cut(s)	456, 501, 723, 797, 1369, 1516, 1608
BstDSI	CCRYGG	1 cut(s)	571
BstF5I	GGATG	1 cut(s)	374
BstFNI	CGCG	7 cut(s)	156, 158, 171, 255, 573, 1241, 1582
BstH2I	RGCGCY	4 cut(s)	192, 237, 285, 514
BstHHI	GCGC	9 cut(s)	158, 173, 191, 236, 257, 284, 513, 1190, 1241
BstKTI	GATC	2 cut(s)	1384, 1590
BstMAI	GTCTC	3 cut(s)	323, 924, 1611
BstMBI	GATC	2 cut(s)	1381, 1587
BstNI	CCWGG	2 cut(s)	678, 926
BstNSI	RCATGY	2 cut(s)	1001, 1444
BstSCI	CCNGG	3 cut(s)	676, 730, 924
BstSFI	CTRYAG	2 cut(s)	506, 1305
BstSLI	GKGCMC	1 cut(s)	378
BstUI	CGCG	7 cut(s)	156, 158, 171, 255, 573, 1241, 1582
BstV1I	GCAGC	5 cut(s)	252, 492, 520, 694, 1621
BstV2I	GAAGAC	1 cut(s)	1381
BsuI	GTATCC	1 cut(s)	752
BsuRI	GGCC	3 cut(s)	570, 1351, 1361
BtgI	CCRYGG	1 cut(s)	571
BtsCI	GGATG	1 cut(s)	374
BtsIMutI	CAGTG	1 cut(s)	516
Cac8I	GCNNGC	3 cut(s)	238, 302, 1498
CaiI	CAGNNNCTG	2 cut(s)	1487, 1550
CciI	TCATGA	1 cut(s)	1392
CfoI	GCGC	9 cut(s)	158, 173, 191, 236, 257, 284, 513, 1190, 1241
Cfr10I	RCCGGY	2 cut(s)	236, 335
Cfr13I	GGNCC	3 cut(s)	562, 586, 1350
Cfr42I	CCGCGG	1 cut(s)	574
CseI	GACGC	3 cut(s)	147, 238, 331
Csp6I	GTAC	3 cut(s)	448, 688, 1107
CviAII	CATG	7 cut(s)	413, 467, 812, 998, 1354, 1393, 1441
CviQI	GTAC	3 cut(s)	448, 688, 1107
DdeI	CTNAG	7 cut(s)	456, 501, 723, 797, 1369, 1516, 1608
DinI	GGCGCC	3 cut(s)	190, 235, 283
DpnI	GATC	2 cut(s)	1383, 1589
DpnII	GATC	2 cut(s)	1381, 1587
Eam1104I	CTCTTC	6 cut(s)	52, 80, 111, 227, 849, 1548
EarI	CTCTTC	6 cut(s)	52, 80, 111, 227, 849, 1548
EciI	GGCGGA	1 cut(s)	130
Ecl136II	GAGCTC	1 cut(s)	304
Eco130I	CCWWGG	2 cut(s)	285, 565
Eco24I	GRGCYC	2 cut(s)	306, 1221
Eco31I	GGTCTC	1 cut(s)	323
Eco32I	GATATC	1 cut(s)	1330
Eco47I	GGWCC	2 cut(s)	562, 586
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	3 cut(s)	1314, 1330, 1572
Eco72I	CACGTG	1 cut(s)	354
EcoICRI	GAGCTC	1 cut(s)	304
EcoRI	GAATTC	1 cut(s)	1097
EcoRII	CCWGG	2 cut(s)	676, 924
EcoRV	GATATC	1 cut(s)	1330
EcoT14I	CCWWGG	2 cut(s)	285, 565
EcoT38I	GRGCYC	2 cut(s)	306, 1221
EgeI	GGCGCC	3 cut(s)	190, 235, 283
EheI	GGCGCC	3 cut(s)	190, 235, 283
ErhI	CCWWGG	2 cut(s)	285, 565
Esp3I	CGTCTC	1 cut(s)	1611
FaeI	CATG	7 cut(s)	416, 470, 815, 1001, 1357, 1396, 1444
FalI	AAGNNNNNCTT	4 cut(s)	1272, 1304, 1499, 1531
FatI	CATG	7 cut(s)	412, 466, 811, 997, 1353, 1392, 1440
FauI	CCCGC	4 cut(s)	155, 209, 269, 597
FblI	GTMKAC	1 cut(s)	1021
FokI	GGATG	1 cut(s)	381
FriOI	GRGCYC	2 cut(s)	306, 1221
FspBI	CTAG	1 cut(s)	627
GlaI	GCGC	9 cut(s)	157, 172, 190, 235, 256, 283, 512, 1189, 1240
GsaI	CCCAGC	1 cut(s)	1267
GsuI	CTGGAG	2 cut(s)	493, 1149
HaeII	RGCGCY	4 cut(s)	192, 237, 285, 514
HaeIII	GGCC	3 cut(s)	570, 1351, 1361
HapII	CCGG	4 cut(s)	237, 336, 731, 1379
HgaI	GACGC	3 cut(s)	147, 238, 331
HhaI	GCGC	9 cut(s)	158, 173, 191, 236, 257, 284, 513, 1190, 1241
Hin1I	GRCGYC	5 cut(s)	189, 234, 249, 282, 342
Hin1II	CATG	7 cut(s)	416, 470, 815, 1001, 1357, 1396, 1444
Hin6I	GCGC	9 cut(s)	156, 171, 189, 234, 255, 282, 511, 1188, 1239
HinP1I	GCGC	9 cut(s)	156, 171, 189, 234, 255, 282, 511, 1188, 1239
HindIII	AAGCTT	1 cut(s)	86
HinfI	GANTC	9 cut(s)	194, 698, 917, 1156, 1162, 1243, 1386, 1454, 1573
HpaII	CCGG	4 cut(s)	237, 336, 731, 1379
HphI	GGTGA	7 cut(s)	28, 122, 217, 1072, 1331, 1449, 1529
Hpy166II	GTNNAC	3 cut(s)	394, 586, 1022
Hpy188III	TCNNGA	5 cut(s)	541, 668, 713, 1393, 1610
Hpy8I	GTNNAC	3 cut(s)	394, 586, 1022
Hpy99I	CGWCG	1 cut(s)	347
HpyAV	CCTTC	4 cut(s)	319, 1175, 1257, 1351
HpyCH4III	ACNGT	2 cut(s)	598, 982
HpyCH4IV	ACGT	1 cut(s)	353
HpyCH4V	TGCA	6 cut(s)	508, 767, 1010, 1412, 1438, 1481
HpyF3I	CTNAG	7 cut(s)	456, 501, 723, 797, 1369, 1516, 1608
HpySE526I	ACGT	1 cut(s)	353
Hsp92I	GRCGYC	5 cut(s)	189, 234, 249, 282, 342
Hsp92II	CATG	7 cut(s)	416, 470, 815, 1001, 1357, 1396, 1444
HspAI	GCGC	9 cut(s)	156, 171, 189, 234, 255, 282, 511, 1188, 1239
KasI	GGCGCC	3 cut(s)	188, 233, 281
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
KspI	CCGCGG	1 cut(s)	574
Kzo9I	GATC	2 cut(s)	1381, 1587
LmnI	GCTCC	5 cut(s)	17, 143, 309, 474, 1079
Lsp1109I	GCAGC	5 cut(s)	252, 492, 520, 694, 1621
LweI	GCATC	2 cut(s)	694, 1510
MaeI	CTAG	1 cut(s)	627
MaeII	ACGT	1 cut(s)	353
MaeIII	GTNAC	3 cut(s)	553, 1141, 1561
MalI	GATC	2 cut(s)	1383, 1589
MbiI	CCGCTC	1 cut(s)	138
MboI	GATC	2 cut(s)	1381, 1587
MfeI	CAATTG	1 cut(s)	744
MhlI	GDGCHC	5 cut(s)	306, 378, 479, 540, 1221
MluCI	AATT	9 cut(s)	274, 416, 639, 744, 1036, 1065, 1097, 1122, 1464
Mly113I	GGCGCC	3 cut(s)	189, 234, 282
MlyI	GAGTC	5 cut(s)	188, 926, 1156, 1395, 1567
MmeI	TCCRAC	2 cut(s)	204, 964
MroNI	GCCGGC	1 cut(s)	236
MroXI	GAANNNNTTC	1 cut(s)	1467
MseI	TTAA	2 cut(s)	935, 1491
MslI	CAYNNNNRTG	2 cut(s)	356, 482
MspA1I	CMGCKG	5 cut(s)	243, 573, 944, 1550, 1640
MspI	CCGG	4 cut(s)	237, 336, 731, 1379
MspR9I	CCNGG	3 cut(s)	678, 732, 926
MunI	CAATTG	1 cut(s)	744
Mva1269I	GAATGC	1 cut(s)	550
MvaI	CCWGG	2 cut(s)	678, 926
MvnI	CGCG	7 cut(s)	156, 158, 171, 255, 573, 1241, 1582
NaeI	GCCGGC	1 cut(s)	238
NarI	GGCGCC	3 cut(s)	189, 234, 282
NciI	CCSGG	1 cut(s)	732
NdeII	GATC	2 cut(s)	1381, 1587
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	7 cut(s)	416, 470, 815, 1001, 1357, 1396, 1444
NlaIV	GGNNCC	5 cut(s)	190, 235, 283, 588, 1116
NmuCI	GTSAC	2 cut(s)	553, 1561
NspI	RCATGY	2 cut(s)	1001, 1444
NspV	TTCGAA	1 cut(s)	401
OliI	CACNNNNGTG	1 cut(s)	356
PagI	TCATGA	1 cut(s)	1392
PciI	ACATGT	2 cut(s)	997, 1440
PcsI	WCGNNNNNNNCGW	1 cut(s)	297
PctI	GAATGC	1 cut(s)	550
PdiI	GCCGGC	1 cut(s)	238
PdmI	GAANNNNTTC	1 cut(s)	1467
PfeI	GAWTC	4 cut(s)	698, 1156, 1243, 1454
PflMI	CCANNNNNTGG	1 cut(s)	1274
PfoI	TCCNGGA	1 cut(s)	676
PleI	GAGTC	5 cut(s)	188, 925, 1156, 1394, 1567
PluTI	GGCGCC	3 cut(s)	192, 237, 285
PmaCI	CACGTG	1 cut(s)	354
PmlI	CACGTG	1 cut(s)	354
PpsI	GAGTC	5 cut(s)	188, 925, 1156, 1394, 1567
Ppu21I	YACGTR	1 cut(s)	354
PscI	ACATGT	2 cut(s)	997, 1440
Psp124BI	GAGCTC	1 cut(s)	306
Psp6I	CCWGG	2 cut(s)	676, 924
PspCI	CACGTG	1 cut(s)	354
PspFI	CCCAGC	1 cut(s)	1263
PspGI	CCWGG	2 cut(s)	676, 924
PspN4I	GGNNCC	5 cut(s)	190, 235, 283, 588, 1116
PspPI	GGNCC	3 cut(s)	562, 586, 1350
PstI	CTGCAG	1 cut(s)	510
PstNI	CAGNNNCTG	2 cut(s)	1487, 1550
PvuII	CAGCTG	1 cut(s)	944
RsaI	GTAC	3 cut(s)	449, 689, 1108
RsaNI	GTAC	3 cut(s)	448, 688, 1107
RseI	CAYNNNNRTG	2 cut(s)	356, 482
SacI	GAGCTC	1 cut(s)	306
SacII	CCGCGG	1 cut(s)	574
SaqAI	TTAA	2 cut(s)	935, 1491
Sau3AI	GATC	2 cut(s)	1381, 1587
Sau96I	GGNCC	3 cut(s)	562, 586, 1350
SchI	GAGTC	5 cut(s)	188, 926, 1156, 1395, 1567
ScrFI	CCNGG	3 cut(s)	678, 732, 926
SduI	GDGCHC	5 cut(s)	306, 378, 479, 540, 1221
SfaNI	GCATC	2 cut(s)	694, 1510
SfcI	CTRYAG	2 cut(s)	506, 1305
SfoI	GGCGCC	3 cut(s)	190, 235, 283
Sfr303I	CCGCGG	1 cut(s)	574
SfuI	TTCGAA	1 cut(s)	401
SgrAI	CRCCGGYG	1 cut(s)	335
SgrBI	CCGCGG	1 cut(s)	574
SinI	GGWCC	2 cut(s)	562, 586
SmiMI	CAYNNNNRTG	2 cut(s)	356, 482
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
Sse9I	AATT	9 cut(s)	274, 416, 639, 744, 1036, 1065, 1097, 1122, 1464
SspDI	GGCGCC	3 cut(s)	188, 233, 281
SspMI	CTAG	1 cut(s)	627
SstI	GAGCTC	1 cut(s)	306
StyD4I	CCNGG	3 cut(s)	676, 730, 924
StyI	CCWWGG	2 cut(s)	285, 565
TaaI	ACNGT	2 cut(s)	598, 982
TaiI	ACGT	1 cut(s)	356
TaqI	TCGA	3 cut(s)	216, 401, 1384
TaqII	GACCGA	1 cut(s)	1164
TasI	AATT	9 cut(s)	274, 416, 639, 744, 1036, 1065, 1097, 1122, 1464
TauI	GCSGC	9 cut(s)	153, 156, 246, 249, 342, 351, 573, 1550, 1640
TfiI	GAWTC	4 cut(s)	698, 1156, 1243, 1454
Tru1I	TTAA	2 cut(s)	935, 1491
Tru9I	TTAA	2 cut(s)	935, 1491
TscAI	CASTG	1 cut(s)	523
TseFI	GTSAC	2 cut(s)	553, 1561
TseI	GCWGC	5 cut(s)	240, 505, 508, 707, 1634
Tsp45I	GTSAC	2 cut(s)	553, 1561
TspDTI	ATGAA	7 cut(s)	429, 867, 942, 1110, 1370, 1381, 1409
TspGWI	ACGGA	1 cut(s)	1593
TspRI	CASTG	1 cut(s)	523
Van91I	CCANNNNNTGG	1 cut(s)	1274
VpaK11BI	GGWCC	2 cut(s)	562, 586
XapI	RAATTY	3 cut(s)	416, 1036, 1097
XceI	RCATGY	2 cut(s)	1001, 1444
XcmI	CCANNNNNNNNNTGG	2 cut(s)	385, 1271
XmiI	GTMKAC	1 cut(s)	1021
XmnI	GAANNNNTTC	1 cut(s)	1467
XspI	CTAG	1 cut(s)	627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.