Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007887

Physical Location & Seq

Genomic Coordinates Reverse (-)

50880169 .. 50884078

Gene Structure 3910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G027190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCGAGCTGCTCTCTCTCCACCACCATCTCTTCCTCCTACCCATCACTCCAAACCCTCCTCTTCCCCAAAAAGCTTCCATCTTTCCTCTCTCTTCCCCAAACCCTAACCTCCCCTCACCTCCGCTCCGCCTCCCGCCGCCGCGCTTCCTCCACACGAGCCCAGTCCGACGACAACGGCGCCGACTCCTCCCGCCACTACGATTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGAGTCCGCGCCTCCCGCTTCGCCTCCAATTTCGGCGCCAAGGTCGCCGTCTGCGAGCTCCCCTTCGCCGCCATCTCCTCCGACACCACCGGCGGCGTCGGCGGCACGTGTGTGCTTCGTGGATGTGTGCCCAAGAAGCTACTGGTTTACGCTTCGAAATATACACATGAATTTGATGACAGCATTGGCTATGGGTGGAAGTACGAAACTGAGCCGAAGCATGACTGGAGCACTTTGATGGCTAACAAGAATGCTGAGCTGCAGCGCCTCACTGGTATTTACAAGAACGTGCTCAAGAATGCTAATGTCACTTTGGTCCAAGGCCGCGGAAAGGTAGTGGACCCGCACACGGTTGATGTAGATGGCAAGTTGTATTCTGCTAGACATATACTAATTTCGGTTGGGGGCCGACCGTTTATCCCTGATATTCCTGGAAGTGAGTATGCAATAGATTCTGATGCTGCTCTTGATTTGCCTGACAAGCCTGGGAAAATAGCAATAGTTGGTGGTGGGTACATTGCCTTGGAGTTTGCTGGTATCTTCAATGGTCTGAGGAGCGATGTCCATGTGTTTATACGGCAAAAGCAAGTTTTGAGGGGTTTTGATGAAGAGATTAGAGGTTTTGTTTCTGAACAGATGTCTGTGAGAGGGATTGAGTTCCATACAGAGGAGTCTCCCCAGGCTATCTTAAAATCAGCTGATGGTTCATTTTCCCTGAAAACTAACAAAGGAACAGTTGGAGGGTTCTCACACGTTATGTTTGCAACAGGGCGTAGACCTAACACAAAGAATTTAGGATTGGAGGAGGTAGGGGTGAAAATTGCCAAAAATGGAGCAATAGAGGTTGATGAATTCTCTCGTACATCGGTTCCCTCAATTTGGGCTGTGGGAGATGTTACAGACCGAGTGAATCTGACTCCAGTTGCTTTGATGGAAGGAGGCGCATTAGCAAAAACACTTTTTCTGAATGAGCCCACAAAACCTGATTACAGAGCGATTCCTTCTGCTGTGTTTTCCCAGCCACCCATTGGGCAAGTTGGTCTTTCTGAAGAACAGGCTACAGAACAATATGGTGATGTTGATATCTACACATCAAACTTCAGGCCCATGAAGGCCACTCTCTCAGGGTTGCCAGATCGAGTCTTCATGAAACTTTTAGTGTGTGCAAAGACAAACAAACTTCTGGGTTTGCACATGTGCGGAGAAGATTCACCCGAAATTGTTCAGGGGTTTGCAGTTGCTGTTAAAGCTGGCTTGACAAAGGCAGACTTAGATGCCACGATAGGTATTCACCCAACAGCCGCTGAAGAGTTTGTCACAATGAGGACTCCTACTCGGAAGATCAGAAAAAACCCTCCGTCTCAGGAGAAGCCATCTGATGTGAAAGCTGCCGCTGGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0000305 GO:0003674 GO:0003824 GO:0004362 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0010035 GO:0015036 GO:0015037 GO:0015038 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0017076 GO:0019725 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0042592 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097159 GO:0097237 GO:0097367 GO:0098754 GO:0098869 GO:1901265 GO:1901363 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko04918 map00480 map04918

Pfam Domains

Protein Families

Pyr_redox_2 Pyr_redox_dim

Protein Analysis

546

Amino Acids

58.78

Weight (kDa)

8.53

Isoelectric Point (pI)

39.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	70 - 392	8.3e-65	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	243 - 320	2.3e-21	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim	PF02852	412 - 520	6.9e-34	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54660
fragaria_vesca	FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490
malus_domestica	MD05G1205200.v1.1
prunus_persica	Prupe.8G231700_v2.0.a1
pyrus_communis	pycom05g19140 pycom10g16610
rosa_chinensis	RchiOBHm_Chr6g0289441
rosa_laevigata	RLG00000012301
rosa_multiflora	Rmu_co8022184.1_g000001 Rmu_sc0001527.1_g000037
rosa_roxburghii	Rroxscaffold_7G00179210
rosa_rugosa	Rorug06G0203500 Rorug06G0203600 Rorug06G0203700
rosa_samantha	Rh6AG314500 Rh6BG322200 Rh6DG314100
rosa_wichuraiana	Rw6G027190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	179, 224, 272
AccB7I	CCANNNNNTGG	1 cut(s)	1265
AccBSI	CCGCTC	1 cut(s)	126
AccI	GTMKAC	1 cut(s)	1012
AccII	CGCG	3 cut(s)	144, 246, 564
AcsI	RAATTY	3 cut(s)	407, 1027, 1088
AcuI	CTGAAG	3 cut(s)	1305, 1321, 1563
AcvI	CACGTG	1 cut(s)	345
AcyI	GRCGYC	4 cut(s)	180, 225, 273, 333
AfaI	GTAC	3 cut(s)	440, 752, 1099
AfiI	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
AflIII	ACRYGT	3 cut(s)	344, 988, 1431
AgsI	TTSAA	1 cut(s)	781
AjnI	CCWGG	3 cut(s)	667, 721, 915
AjuI	GAANNNNNNNTTGG	2 cut(s)	1019, 1051
AleI	CACNNNNGTG	1 cut(s)	347
AluBI	AGCT	8 cut(s)	9, 76, 295, 376, 496, 935, 1487, 1625
AluI	AGCT	8 cut(s)	9, 76, 295, 376, 496, 935, 1487, 1625
Alw21I	GWGCWC	3 cut(s)	297, 470, 531
Alw26I	GTCTC	2 cut(s)	915, 1602
AlwNI	CAGNNNCTG	2 cut(s)	1478, 1541
AoxI	GGCC	4 cut(s)	559, 643, 1340, 1350
ApeKI	GCWGC	6 cut(s)	9, 231, 496, 499, 698, 1625
ApoI	RAATTY	3 cut(s)	407, 1027, 1088
Asp700I	GAANNNNTTC	1 cut(s)	1458
AspLEI	GCGC	7 cut(s)	146, 182, 227, 248, 275, 504, 1181
AspS9I	GGNCC	4 cut(s)	553, 577, 643, 1341
AsuHPI	GGTGA	6 cut(s)	110, 208, 1063, 1322, 1440, 1520
AsuII	TTCGAA	1 cut(s)	392
AvaII	GGWCC	2 cut(s)	553, 577
BaeGI	GKGCMC	1 cut(s)	369
BanI	GGYRCC	3 cut(s)	179, 224, 272
BanII	GRGCYC	3 cut(s)	163, 297, 1212
BauI	CACGAG	1 cut(s)	156
BbrPI	CACGTG	1 cut(s)	345
BbsI	GAAGAC	1 cut(s)	1372
Bbv12I	GWGCWC	3 cut(s)	297, 470, 531
BbvI	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
BceAI	ACGGC	3 cut(s)	193, 269, 830
BciT130I	CCWGG	3 cut(s)	669, 723, 917
BcoDI	GTCTC	2 cut(s)	915, 1602
BfaI	CTAG	1 cut(s)	618
BfmI	CTRYAG	2 cut(s)	497, 1296
BfoI	RGCGCY	4 cut(s)	183, 228, 276, 505
BlpI	GCTNAGC	1 cut(s)	492
Bme1390I	CCNGG	3 cut(s)	669, 723, 917
Bme18I	GGWCC	2 cut(s)	553, 577
BmgT120I	GGNCC	4 cut(s)	553, 577, 643, 1341
BmiI	GGNNCC	6 cut(s)	181, 226, 274, 579, 644, 1107
BmrFI	CCNGG	3 cut(s)	669, 723, 917
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	2 cut(s)	685, 1501
BmuI	ACTGGG	1 cut(s)	157
BpiI	GAAGAC	1 cut(s)	1372
BplI	GAGNNNNNCTC	1 cut(s)	30
BpmI	CTGGAG	2 cut(s)	484, 1140
Bpu1102I	GCTNAGC	1 cut(s)	492
Bpu14I	TTCGAA	1 cut(s)	392
BpuEI	CTTGAG	1 cut(s)	515
BsaAI	YACGTR	1 cut(s)	345
BsaHI	GRCGYC	4 cut(s)	180, 225, 273, 333
BsaJI	CCNNGG	6 cut(s)	276, 556, 562, 722, 759, 915
BsaXI	ACNNNNNCTCC	2 cut(s)	110, 140
Bsc4I	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
Bse118I	RCCGGY	2 cut(s)	227, 326
Bse1I	ACTGG	5 cut(s)	163, 384, 467, 514, 1157
Bse3DI	GCAATG	1 cut(s)	753
BseBI	CCWGG	3 cut(s)	669, 723, 917
BseDI	CCNNGG	6 cut(s)	276, 556, 562, 722, 759, 915
BseGI	GGATG	1 cut(s)	365
BseLI	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
BseMI	GCAATG	1 cut(s)	753
BseMII	CTCAG	5 cut(s)	438, 483, 779, 1374, 1613
BseNI	ACTGG	5 cut(s)	163, 384, 467, 514, 1157
BseRI	GAGGAG	6 cut(s)	50, 178, 304, 805, 920, 1055
BseSI	GKGCMC	1 cut(s)	369
BseXI	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
BseYI	CCCAGC	1 cut(s)	1254
Bsh1236I	CGCG	3 cut(s)	144, 246, 564
Bsh1285I	CGRYCG	1 cut(s)	650
BshFI	GGCC	4 cut(s)	561, 645, 1342, 1352
BshNI	GGYRCC	3 cut(s)	179, 224, 272
BsiEI	CGRYCG	1 cut(s)	650
BsiHKAI	GWGCWC	3 cut(s)	297, 470, 531
BsiSI	CCGG	2 cut(s)	228, 327
BslI	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
BsmAI	GTCTC	2 cut(s)	915, 1602
BsmBI	CGTCTC	1 cut(s)	1602
BsmI	GAATGC	2 cut(s)	493, 541
BsnI	GGCC	4 cut(s)	561, 645, 1342, 1352
Bsp119I	TTCGAA	1 cut(s)	392
Bsp1286I	GDGCHC	6 cut(s)	163, 297, 369, 470, 531, 1212
Bsp143I	GATC	2 cut(s)	1372, 1578
Bsp1720I	GCTNAGC	1 cut(s)	492
BspANI	GGCC	4 cut(s)	561, 645, 1342, 1352
BspCNI	CTCAG	5 cut(s)	439, 484, 780, 1373, 1612
BspFNI	CGCG	3 cut(s)	144, 246, 564
BspHI	TCATGA	1 cut(s)	1383
BspLI	GGNNCC	6 cut(s)	181, 226, 274, 579, 644, 1107
BspMAI	CTGCAG	1 cut(s)	501
BspT104I	TTCGAA	1 cut(s)	392
BspT107I	GGYRCC	3 cut(s)	179, 224, 272
BsrBI	CCGCTC	1 cut(s)	126
BsrDI	GCAATG	1 cut(s)	753
BsrFI	RCCGGY	2 cut(s)	227, 326
BsrI	ACTGG	5 cut(s)	163, 384, 467, 514, 1157
BssAI	RCCGGY	2 cut(s)	227, 326
BssECI	CCNNGG	6 cut(s)	276, 556, 562, 722, 759, 915
BssMI	GATC	2 cut(s)	1372, 1578
BssNI	GRCGYC	4 cut(s)	180, 225, 273, 333
BssSI	CACGAG	1 cut(s)	156
BssT1I	CCWWGG	3 cut(s)	276, 556, 759
Bst2BI	CACGAG	1 cut(s)	156
Bst2UI	CCWGG	3 cut(s)	669, 723, 917
Bst4CI	ACNGT	3 cut(s)	589, 651, 973
Bst6I	CTCTTC	6 cut(s)	37, 68, 99, 218, 840, 1539
BstACI	GRCGYC	4 cut(s)	180, 225, 273, 333
BstBAI	YACGTR	1 cut(s)	345
BstBI	TTCGAA	1 cut(s)	392
BstC8I	GCNNGC	4 cut(s)	7, 229, 293, 1489
BstDEI	CTNAG	6 cut(s)	447, 492, 788, 1360, 1507, 1599
BstDSI	CCRYGG	1 cut(s)	562
BstF5I	GGATG	1 cut(s)	365
BstFNI	CGCG	3 cut(s)	144, 246, 564
BstH2I	RGCGCY	4 cut(s)	183, 228, 276, 505
BstHHI	GCGC	7 cut(s)	146, 182, 227, 248, 275, 504, 1181
BstKTI	GATC	2 cut(s)	1375, 1581
BstMAI	GTCTC	2 cut(s)	915, 1602
BstMBI	GATC	2 cut(s)	1372, 1578
BstMCI	CGRYCG	1 cut(s)	650
BstMWI	GCNNNNNNNGC	9 cut(s)	231, 243, 252, 281, 336, 339, 373, 718, 1484
BstNI	CCWGG	3 cut(s)	669, 723, 917
BstNSI	RCATGY	1 cut(s)	1435
BstSCI	CCNGG	3 cut(s)	667, 721, 915
BstSFI	CTRYAG	2 cut(s)	497, 1296
BstSLI	GKGCMC	1 cut(s)	369
BstUI	CGCG	3 cut(s)	144, 246, 564
BstV1I	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
BstV2I	GAAGAC	1 cut(s)	1372
BsuRI	GGCC	4 cut(s)	561, 645, 1342, 1352
BtgI	CCRYGG	1 cut(s)	562
BtgZI	GCGATG	1 cut(s)	810
BtsCI	GGATG	1 cut(s)	365
BtsIMutI	CAGTG	1 cut(s)	507
Cac8I	GCNNGC	4 cut(s)	7, 229, 293, 1489
CaiI	CAGNNNCTG	2 cut(s)	1478, 1541
CciI	TCATGA	1 cut(s)	1383
CfoI	GCGC	7 cut(s)	146, 182, 227, 248, 275, 504, 1181
Cfr10I	RCCGGY	2 cut(s)	227, 326
Cfr13I	GGNCC	4 cut(s)	553, 577, 643, 1341
Cfr42I	CCGCGG	1 cut(s)	565
CseI	GACGC	1 cut(s)	322
Csp6I	GTAC	3 cut(s)	439, 751, 1098
CviAII	CATG	6 cut(s)	404, 458, 803, 1345, 1384, 1432
CviQI	GTAC	3 cut(s)	439, 751, 1098
DdeI	CTNAG	6 cut(s)	447, 492, 788, 1360, 1507, 1599
DinI	GGCGCC	3 cut(s)	181, 226, 274
DpnI	GATC	2 cut(s)	1374, 1580
DpnII	GATC	2 cut(s)	1372, 1578
Eam1104I	CTCTTC	6 cut(s)	37, 68, 99, 218, 840, 1539
EarI	CTCTTC	6 cut(s)	37, 68, 99, 218, 840, 1539
EciI	GGCGGA	2 cut(s)	118, 252
Ecl136II	GAGCTC	1 cut(s)	295
Eco130I	CCWWGG	3 cut(s)	276, 556, 759
Eco24I	GRGCYC	3 cut(s)	163, 297, 1212
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	2 cut(s)	553, 577
Eco53kI	GAGCTC	1 cut(s)	295
Eco57I	CTGAAG	3 cut(s)	1305, 1321, 1563
Eco72I	CACGTG	1 cut(s)	345
EcoICRI	GAGCTC	1 cut(s)	295
EcoRI	GAATTC	1 cut(s)	1088
EcoRII	CCWGG	3 cut(s)	667, 721, 915
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	3 cut(s)	276, 556, 759
EcoT38I	GRGCYC	3 cut(s)	163, 297, 1212
EgeI	GGCGCC	3 cut(s)	181, 226, 274
EheI	GGCGCC	3 cut(s)	181, 226, 274
ErhI	CCWWGG	3 cut(s)	276, 556, 759
Esp3I	CGTCTC	1 cut(s)	1602
FaeI	CATG	6 cut(s)	407, 461, 806, 1348, 1387, 1435
FalI	AAGNNNNNCTT	4 cut(s)	1263, 1295, 1490, 1522
FatI	CATG	6 cut(s)	403, 457, 802, 1344, 1383, 1431
FauI	CCCGC	4 cut(s)	143, 200, 260, 588
FblI	GTMKAC	1 cut(s)	1012
FokI	GGATG	1 cut(s)	372
FriOI	GRGCYC	3 cut(s)	163, 297, 1212
FspBI	CTAG	1 cut(s)	618
GlaI	GCGC	7 cut(s)	145, 181, 226, 247, 274, 503, 1180
GsaI	CCCAGC	1 cut(s)	1258
GsuI	CTGGAG	2 cut(s)	484, 1140
HaeII	RGCGCY	4 cut(s)	183, 228, 276, 505
HaeIII	GGCC	4 cut(s)	561, 645, 1342, 1352
HapII	CCGG	2 cut(s)	228, 327
HgaI	GACGC	1 cut(s)	322
HhaI	GCGC	7 cut(s)	146, 182, 227, 248, 275, 504, 1181
Hin1I	GRCGYC	4 cut(s)	180, 225, 273, 333
Hin1II	CATG	6 cut(s)	407, 461, 806, 1348, 1387, 1435
Hin6I	GCGC	7 cut(s)	144, 180, 225, 246, 273, 502, 1179
HinP1I	GCGC	7 cut(s)	144, 180, 225, 246, 273, 502, 1179
HindIII	AAGCTT	1 cut(s)	74
HpaII	CCGG	2 cut(s)	228, 327
HphI	GGTGA	6 cut(s)	110, 208, 1063, 1322, 1440, 1520
Hpy166II	GTNNAC	3 cut(s)	385, 577, 1013
Hpy188III	TCNNGA	4 cut(s)	532, 704, 1384, 1601
Hpy8I	GTNNAC	3 cut(s)	385, 577, 1013
Hpy99I	CGWCG	2 cut(s)	173, 338
HpyAV	CCTTC	4 cut(s)	310, 1166, 1248, 1342
HpyCH4III	ACNGT	3 cut(s)	589, 651, 973
HpyCH4IV	ACGT	3 cut(s)	344, 525, 990
HpyCH4V	TGCA	6 cut(s)	499, 683, 1001, 1403, 1429, 1472
HpyF10VI	GCNNNNNNNGC	9 cut(s)	231, 243, 252, 281, 336, 339, 373, 718, 1484
HpyF3I	CTNAG	6 cut(s)	447, 492, 788, 1360, 1507, 1599
HpySE526I	ACGT	3 cut(s)	344, 525, 990
Hsp92I	GRCGYC	4 cut(s)	180, 225, 273, 333
Hsp92II	CATG	6 cut(s)	407, 461, 806, 1348, 1387, 1435
HspAI	GCGC	7 cut(s)	144, 180, 225, 246, 273, 502, 1179
KasI	GGCGCC	3 cut(s)	179, 224, 272
KroI	GCCGGC	1 cut(s)	227
KroNI	GCCGGC	1 cut(s)	229
KspI	CCGCGG	1 cut(s)	565
Kzo9I	GATC	2 cut(s)	1372, 1578
LmnI	GCTCC	5 cut(s)	131, 300, 465, 792, 1070
Lsp1109I	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
LweI	GCATC	2 cut(s)	685, 1501
MaeI	CTAG	1 cut(s)	618
MaeII	ACGT	3 cut(s)	344, 525, 990
MaeIII	GTNAC	3 cut(s)	544, 1132, 1552
MalI	GATC	2 cut(s)	1374, 1580
MbiI	CCGCTC	1 cut(s)	126
MboI	GATC	2 cut(s)	1372, 1578
MhlI	GDGCHC	6 cut(s)	163, 297, 369, 470, 531, 1212
MluCI	AATT	8 cut(s)	265, 407, 630, 1027, 1056, 1088, 1113, 1455
Mly113I	GGCGCC	3 cut(s)	180, 225, 273
MlyI	GAGTC	6 cut(s)	179, 249, 917, 1147, 1386, 1558
MmeI	TCCRAC	3 cut(s)	192, 342, 955
MroNI	GCCGGC	1 cut(s)	227
MroXI	GAANNNNTTC	1 cut(s)	1458
MseI	TTAA	2 cut(s)	926, 1482
MslI	CAYNNNNRTG	2 cut(s)	347, 473
MspA1I	CMGCKG	5 cut(s)	234, 564, 935, 1541, 1631
MspI	CCGG	2 cut(s)	228, 327
MspR9I	CCNGG	3 cut(s)	669, 723, 917
Mva1269I	GAATGC	2 cut(s)	493, 541
MvaI	CCWGG	3 cut(s)	669, 723, 917
MvnI	CGCG	3 cut(s)	144, 246, 564
MwoI	GCNNNNNNNGC	9 cut(s)	231, 243, 252, 281, 336, 339, 373, 718, 1484
NaeI	GCCGGC	1 cut(s)	229
NarI	GGCGCC	3 cut(s)	180, 225, 273
NdeII	GATC	2 cut(s)	1372, 1578
NgoMIV	GCCGGC	1 cut(s)	227
NlaIII	CATG	6 cut(s)	407, 461, 806, 1348, 1387, 1435
NlaIV	GGNNCC	6 cut(s)	181, 226, 274, 579, 644, 1107
NmuCI	GTSAC	2 cut(s)	544, 1552
NspI	RCATGY	1 cut(s)	1435
NspV	TTCGAA	1 cut(s)	392
OliI	CACNNNNGTG	1 cut(s)	347
PagI	TCATGA	1 cut(s)	1383
PciI	ACATGT	1 cut(s)	1431
PcsI	WCGNNNNNNNCGW	1 cut(s)	288
PctI	GAATGC	2 cut(s)	493, 541
PdiI	GCCGGC	1 cut(s)	229
PdmI	GAANNNNTTC	1 cut(s)	1458
PfeI	GAWTC	4 cut(s)	689, 1147, 1234, 1445
PflMI	CCANNNNNTGG	1 cut(s)	1265
PfoI	TCCNGGA	1 cut(s)	667
PleI	GAGTC	6 cut(s)	179, 248, 916, 1147, 1385, 1558
PluTI	GGCGCC	3 cut(s)	183, 228, 276
PmaCI	CACGTG	1 cut(s)	345
PmlI	CACGTG	1 cut(s)	345
PpsI	GAGTC	6 cut(s)	179, 248, 916, 1147, 1385, 1558
Ppu21I	YACGTR	1 cut(s)	345
PscI	ACATGT	1 cut(s)	1431
Psp124BI	GAGCTC	1 cut(s)	297
Psp6I	CCWGG	3 cut(s)	667, 721, 915
PspCI	CACGTG	1 cut(s)	345
PspFI	CCCAGC	1 cut(s)	1254
PspGI	CCWGG	3 cut(s)	667, 721, 915
PspN4I	GGNNCC	6 cut(s)	181, 226, 274, 579, 644, 1107
PspPI	GGNCC	4 cut(s)	553, 577, 643, 1341
PstI	CTGCAG	1 cut(s)	501
PstNI	CAGNNNCTG	2 cut(s)	1478, 1541
PvuII	CAGCTG	1 cut(s)	935
RsaI	GTAC	3 cut(s)	440, 752, 1099
RsaNI	GTAC	3 cut(s)	439, 751, 1098
RseI	CAYNNNNRTG	2 cut(s)	347, 473
SacI	GAGCTC	1 cut(s)	297
SacII	CCGCGG	1 cut(s)	565
SaqAI	TTAA	2 cut(s)	926, 1482
Sau3AI	GATC	2 cut(s)	1372, 1578
Sau96I	GGNCC	4 cut(s)	553, 577, 643, 1341
SchI	GAGTC	6 cut(s)	179, 249, 917, 1147, 1386, 1558
ScrFI	CCNGG	3 cut(s)	669, 723, 917
SduI	GDGCHC	6 cut(s)	163, 297, 369, 470, 531, 1212
SfaNI	GCATC	2 cut(s)	685, 1501
SfcI	CTRYAG	2 cut(s)	497, 1296
SfoI	GGCGCC	3 cut(s)	181, 226, 274
Sfr303I	CCGCGG	1 cut(s)	565
SfuI	TTCGAA	1 cut(s)	392
SgrAI	CRCCGGYG	1 cut(s)	326
SgrBI	CCGCGG	1 cut(s)	565
SinI	GGWCC	2 cut(s)	553, 577
SmiMI	CAYNNNNRTG	2 cut(s)	347, 473
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
Sse9I	AATT	8 cut(s)	265, 407, 630, 1027, 1056, 1088, 1113, 1455
SspDI	GGCGCC	3 cut(s)	179, 224, 272
SspMI	CTAG	1 cut(s)	618
SstI	GAGCTC	1 cut(s)	297
StyD4I	CCNGG	3 cut(s)	667, 721, 915
StyI	CCWWGG	3 cut(s)	276, 556, 759
TaaI	ACNGT	3 cut(s)	589, 651, 973
TaiI	ACGT	3 cut(s)	347, 528, 993
TaqI	TCGA	3 cut(s)	207, 392, 1375
TaqII	GACCGA	1 cut(s)	1155
TasI	AATT	8 cut(s)	265, 407, 630, 1027, 1056, 1088, 1113, 1455
TauI	GCSGC	9 cut(s)	141, 144, 237, 308, 333, 342, 564, 1541, 1631
TfiI	GAWTC	4 cut(s)	689, 1147, 1234, 1445
Tru1I	TTAA	2 cut(s)	926, 1482
Tru9I	TTAA	2 cut(s)	926, 1482
TscAI	CASTG	1 cut(s)	514
TseFI	GTSAC	2 cut(s)	544, 1552
TseI	GCWGC	6 cut(s)	9, 231, 496, 499, 698, 1625
Tsp45I	GTSAC	2 cut(s)	544, 1552
TspDTI	ATGAA	7 cut(s)	420, 858, 933, 1101, 1361, 1372, 1400
TspGWI	ACGGA	1 cut(s)	1584
TspRI	CASTG	1 cut(s)	514
Van91I	CCANNNNNTGG	1 cut(s)	1265
VpaK11BI	GGWCC	2 cut(s)	553, 577
XapI	RAATTY	3 cut(s)	407, 1027, 1088
XceI	RCATGY	1 cut(s)	1435
XcmI	CCANNNNNNNNNTGG	2 cut(s)	376, 1262
XmiI	GTMKAC	1 cut(s)	1012
XmnI	GAANNNNTTC	1 cut(s)	1458
XspI	CTAG	1 cut(s)	618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.