Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007887

Physical Location & Seq

Genomic Coordinates Reverse (-)

55279565 .. 55283253

Gene Structure 3689 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG322200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCGAGCTGCTCTCTCTCTCTCTCCACCACCATCTCTTCCTACCCATCACTCCAAACCCTCCTCTTCCCCAAAAAGCTTCCATCTTTCCTCTCTCTTCCCCAAACCCTAACCTCCCCTCACCTCCGCTCCGCCTCCCGCCGCCGCGCGTCCTCCACACGCGCCCAGTCCGACGACGGCGCCGACTCCTCCCGCCACTACGATTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGCGTCCGGGCCTCCCGCTTCGCCTCCAATTTCGGCGCCAGTGTCGCCGTCTGCGAGCTCCCCTTCTCCACCATCTCCTCCGACACCACCGGCGGCGTCGGCGGCACGTGTGTGCTTCGTGGATGTGTGCCCAAGAAGCTACTGGTTTACGCTTCGAAATATACACATGAATTTGATGACAGCATTGGCTATGGGTGGAAGTACGAAACTGAGCCGAAGCATGACTGGAGCACATTGATGGCTAACAAGAATGCTGAGCTGCAGCGCCTCACTGGTATTTACAAGAATGTGCTCAAGAATGCTAATGTCACTTTGGTCCAAGGCCGCGGAAAGGTAGTGGACCCGCACACGGTTGATGTAGATGGGAAGTTGTATTCTGCTAGACATATACTAATTTCGGTTGGGGGGCGACCCTTTATTCCCGATATTCCTGGAAGTGAGTACGCAATAGATTCTGATGCTGCTCTTGATTTGCCTGAGAAGCCGGGGAAAATAGCAATAGTTGGTGGTGGATACATTGCCTTGGAGTTTGCTGGTATCTTCAATGGTCTGAGGAGTGATGTCCATGTGTTTATACGGCAAAAGCAAGTTTTGAGGGGTTTTGATGAAGAGATTAGAGGTTTTGTTTCTGAACAGATGTCTGTGAGAGGGATTGAGTTCCATACAGAGGAGTCTCCCCAGGCTATCTTAAAATCAGCTGATGGTTCATTTTCCCTGAAAACTAACAAAGGAACAGTTGGAGGGTTCTCACATGTTATGTTTGCAACAGGGCGTAGACCTAACACAAAGAATTTAGGATTGGAGGAGGTAGGGGTGAAAATTGCCAAAAATGGAGCAATAGAGGTTGATGAATTCTCTCGTACATCGGTTCCCTCAATTTGGGCTGTGGGAGATGTTACAGACCGAGTGAATCTGACTCCAGTTGCTTTGATGGAAGGCGGCGCATTAGCAAAAACACTTTTTCTGAATGAGCCCACAAAACCTGATTACAGCGCGATTCCTTCTGCTGTGTTTTCCCAGCCACCCATTGGGCAAGTTGGTCTTTCTGAAGAACAGGCTACAGAACAATATGGTGATGTTGATATCTACACATCAAACTTCAGGCCCATGAAGGCCACTCTCTCAGGGTTGCCAGATCGAATCTTCATGAAACTTATAGTGTGTGCAAAGACAAACAAACTTCTGGGTTTGCACATGTGCGGAGAAGATTCACCCGAAATTGTTCAGGGGTTTGCAGTTGCTGTTAAAGCTGGCTTGACAAAGGCAGACTTAGATGCCACGATAGGTATTCACCCGACAGCCGCTGAAGAGTTTGTCACAATGAGGACTCCTACTCGGAAGATCAGAAAAAACCCTCTGTCTCAGGAGAAGCCATCTGATGTGAAAGCTGCCGCTGGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000302 GO:0000305 GO:0003674 GO:0003824 GO:0004362 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0010035 GO:0015036 GO:0015037 GO:0015038 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0017076 GO:0019725 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0042592 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097159 GO:0097237 GO:0097367 GO:0098754 GO:0098869 GO:1901265 GO:1901363 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko04918 map00480 map04918

Pfam Domains

Protein Families

Pyr_redox_2 Pyr_redox_dim

Protein Analysis

546

Amino Acids

58.76

Weight (kDa)

8.07

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	70 - 392	1.9e-64	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	243 - 320	2.3e-21	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim	PF02852	412 - 520	1.6e-34	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54660
fragaria_vesca	FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490 FvH4_2g22490
malus_domestica	MD05G1205200.v1.1
prunus_persica	Prupe.8G231700_v2.0.a1
pyrus_communis	pycom05g19140 pycom10g16610
rosa_chinensis	RchiOBHm_Chr6g0289441
rosa_laevigata	RLG00000012301
rosa_multiflora	Rmu_co8022184.1_g000001 Rmu_sc0001527.1_g000037
rosa_roxburghii	Rroxscaffold_7G00179210
rosa_rugosa	Rorug06G0203500 Rorug06G0203600 Rorug06G0203700
rosa_samantha	Rh6AG314500 Rh6BG322200 Rh6DG314100
rosa_wichuraiana	Rw6G027190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	179, 224, 272
AccB7I	CCANNNNNTGG	1 cut(s)	1265
AccBSI	CCGCTC	1 cut(s)	129
AccI	GTMKAC	1 cut(s)	1012
AccII	CGCG	5 cut(s)	147, 149, 162, 564, 1232
AcsI	RAATTY	3 cut(s)	407, 1027, 1088
AcuI	CTGAAG	3 cut(s)	1305, 1321, 1563
AcvI	CACGTG	1 cut(s)	345
AcyI	GRCGYC	5 cut(s)	180, 225, 240, 273, 333
AfaI	GTAC	3 cut(s)	440, 680, 1099
AfiI	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
AflIII	ACRYGT	3 cut(s)	344, 988, 1431
AgsI	TTSAA	1 cut(s)	781
AjnI	CCWGG	2 cut(s)	667, 915
AjuI	GAANNNNNNNTTGG	2 cut(s)	1019, 1051
AleI	CACNNNNGTG	1 cut(s)	347
AluBI	AGCT	8 cut(s)	9, 79, 295, 376, 496, 935, 1487, 1625
AluI	AGCT	8 cut(s)	9, 79, 295, 376, 496, 935, 1487, 1625
Alw21I	GWGCWC	3 cut(s)	297, 470, 531
Alw26I	GTCTC	2 cut(s)	915, 1602
AlwNI	CAGNNNCTG	2 cut(s)	1478, 1541
AoxI	GGCC	4 cut(s)	246, 559, 1340, 1350
ApeKI	GCWGC	6 cut(s)	9, 231, 496, 499, 698, 1625
ApoI	RAATTY	3 cut(s)	407, 1027, 1088
Asp700I	GAANNNNTTC	1 cut(s)	1458
AspLEI	GCGC	8 cut(s)	149, 164, 182, 227, 275, 504, 1181, 1232
AspS9I	GGNCC	4 cut(s)	246, 553, 577, 1341
AsuC2I	CCSGG	2 cut(s)	245, 723
AsuHPI	GGTGA	6 cut(s)	113, 208, 1063, 1322, 1440, 1520
AsuII	TTCGAA	1 cut(s)	392
AvaII	GGWCC	2 cut(s)	553, 577
BaeGI	GKGCMC	1 cut(s)	369
BanI	GGYRCC	3 cut(s)	179, 224, 272
BanII	GRGCYC	2 cut(s)	297, 1212
BbrPI	CACGTG	1 cut(s)	345
Bbv12I	GWGCWC	3 cut(s)	297, 470, 531
BbvI	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
BceAI	ACGGC	3 cut(s)	193, 269, 830
BciT130I	CCWGG	2 cut(s)	669, 917
BciVI	GTATCC	1 cut(s)	743
BcnI	CCSGG	2 cut(s)	245, 723
BcoDI	GTCTC	2 cut(s)	915, 1602
BfaI	CTAG	1 cut(s)	618
BfmI	CTRYAG	2 cut(s)	497, 1296
BfoI	RGCGCY	4 cut(s)	183, 228, 276, 505
BfuI	GTATCC	1 cut(s)	743
BlpI	GCTNAGC	1 cut(s)	492
Bme1390I	CCNGG	4 cut(s)	245, 669, 723, 917
Bme18I	GGWCC	2 cut(s)	553, 577
BmgT120I	GGNCC	4 cut(s)	246, 553, 577, 1341
BmiI	GGNNCC	5 cut(s)	181, 226, 274, 579, 1107
BmrFI	CCNGG	4 cut(s)	245, 669, 723, 917
BmrI	ACTGGG	1 cut(s)	160
BmsI	GCATC	2 cut(s)	685, 1501
BmuI	ACTGGG	1 cut(s)	160
BplI	GAGNNNNNCTC	1 cut(s)	30
BpmI	CTGGAG	2 cut(s)	484, 1140
Bpu1102I	GCTNAGC	1 cut(s)	492
Bpu14I	TTCGAA	1 cut(s)	392
BpuEI	CTTGAG	1 cut(s)	515
BpuMI	CCSGG	2 cut(s)	245, 723
BsaAI	YACGTR	1 cut(s)	345
BsaHI	GRCGYC	5 cut(s)	180, 225, 240, 273, 333
BsaJI	CCNNGG	5 cut(s)	556, 562, 722, 759, 915
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
Bse118I	RCCGGY	2 cut(s)	227, 326
Bse1I	ACTGG	6 cut(s)	166, 276, 384, 467, 514, 1157
Bse3DI	GCAATG	1 cut(s)	753
BseBI	CCWGG	2 cut(s)	669, 917
BseDI	CCNNGG	5 cut(s)	556, 562, 722, 759, 915
BseGI	GGATG	1 cut(s)	365
BseLI	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
BseMI	GCAATG	1 cut(s)	753
BseMII	CTCAG	6 cut(s)	438, 483, 705, 779, 1374, 1613
BseNI	ACTGG	6 cut(s)	166, 276, 384, 467, 514, 1157
BseRI	GAGGAG	6 cut(s)	53, 178, 304, 805, 920, 1055
BseSI	GKGCMC	1 cut(s)	369
BseXI	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
BseYI	CCCAGC	1 cut(s)	1254
Bsh1236I	CGCG	5 cut(s)	147, 149, 162, 564, 1232
BshFI	GGCC	4 cut(s)	248, 561, 1342, 1352
BshNI	GGYRCC	3 cut(s)	179, 224, 272
BsiHKAI	GWGCWC	3 cut(s)	297, 470, 531
BsiSI	CCGG	4 cut(s)	228, 244, 327, 722
BslI	CCNNNNNNNGG	5 cut(s)	568, 586, 904, 1116, 1265
BsmAI	GTCTC	2 cut(s)	915, 1602
BsmI	GAATGC	2 cut(s)	493, 541
BsnI	GGCC	4 cut(s)	248, 561, 1342, 1352
Bsp119I	TTCGAA	1 cut(s)	392
Bsp1286I	GDGCHC	5 cut(s)	297, 369, 470, 531, 1212
Bsp143I	GATC	2 cut(s)	1372, 1578
Bsp1720I	GCTNAGC	1 cut(s)	492
BspANI	GGCC	4 cut(s)	248, 561, 1342, 1352
BspCNI	CTCAG	6 cut(s)	439, 484, 706, 780, 1373, 1612
BspFNI	CGCG	5 cut(s)	147, 149, 162, 564, 1232
BspHI	TCATGA	1 cut(s)	1383
BspLI	GGNNCC	5 cut(s)	181, 226, 274, 579, 1107
BspMAI	CTGCAG	1 cut(s)	501
BspT104I	TTCGAA	1 cut(s)	392
BspT107I	GGYRCC	3 cut(s)	179, 224, 272
BsrBI	CCGCTC	1 cut(s)	129
BsrDI	GCAATG	1 cut(s)	753
BsrFI	RCCGGY	2 cut(s)	227, 326
BsrI	ACTGG	6 cut(s)	166, 276, 384, 467, 514, 1157
BssAI	RCCGGY	2 cut(s)	227, 326
BssECI	CCNNGG	5 cut(s)	556, 562, 722, 759, 915
BssMI	GATC	2 cut(s)	1372, 1578
BssNI	GRCGYC	5 cut(s)	180, 225, 240, 273, 333
BssT1I	CCWWGG	2 cut(s)	556, 759
Bst2UI	CCWGG	2 cut(s)	669, 917
Bst4CI	ACNGT	2 cut(s)	589, 973
Bst6I	CTCTTC	6 cut(s)	43, 71, 102, 218, 840, 1539
BstACI	GRCGYC	5 cut(s)	180, 225, 240, 273, 333
BstBAI	YACGTR	1 cut(s)	345
BstBI	TTCGAA	1 cut(s)	392
BstC8I	GCNNGC	4 cut(s)	7, 229, 293, 1489
BstDEI	CTNAG	7 cut(s)	447, 492, 714, 788, 1360, 1507, 1599
BstDSI	CCRYGG	1 cut(s)	562
BstF5I	GGATG	1 cut(s)	365
BstFNI	CGCG	5 cut(s)	147, 149, 162, 564, 1232
BstH2I	RGCGCY	4 cut(s)	183, 228, 276, 505
BstHHI	GCGC	8 cut(s)	149, 164, 182, 227, 275, 504, 1181, 1232
BstKTI	GATC	2 cut(s)	1375, 1581
BstMAI	GTCTC	2 cut(s)	915, 1602
BstMBI	GATC	2 cut(s)	1372, 1578
BstMWI	GCNNNNNNNGC	8 cut(s)	231, 237, 281, 336, 339, 373, 718, 1484
BstNI	CCWGG	2 cut(s)	669, 917
BstNSI	RCATGY	2 cut(s)	992, 1435
BstSCI	CCNGG	4 cut(s)	243, 667, 721, 915
BstSFI	CTRYAG	2 cut(s)	497, 1296
BstSLI	GKGCMC	1 cut(s)	369
BstUI	CGCG	5 cut(s)	147, 149, 162, 564, 1232
BstV1I	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
BsuI	GTATCC	1 cut(s)	743
BsuRI	GGCC	4 cut(s)	248, 561, 1342, 1352
BtgI	CCRYGG	1 cut(s)	562
BtsCI	GGATG	1 cut(s)	365
BtsIMutI	CAGTG	2 cut(s)	283, 507
Cac8I	GCNNGC	4 cut(s)	7, 229, 293, 1489
CaiI	CAGNNNCTG	2 cut(s)	1478, 1541
CciI	TCATGA	1 cut(s)	1383
CfoI	GCGC	8 cut(s)	149, 164, 182, 227, 275, 504, 1181, 1232
Cfr10I	RCCGGY	2 cut(s)	227, 326
Cfr13I	GGNCC	4 cut(s)	246, 553, 577, 1341
Cfr42I	CCGCGG	1 cut(s)	565
CseI	GACGC	3 cut(s)	138, 229, 322
Csp6I	GTAC	3 cut(s)	439, 679, 1098
CviAII	CATG	7 cut(s)	404, 458, 803, 989, 1345, 1384, 1432
CviQI	GTAC	3 cut(s)	439, 679, 1098
DdeI	CTNAG	7 cut(s)	447, 492, 714, 788, 1360, 1507, 1599
DinI	GGCGCC	3 cut(s)	181, 226, 274
DpnI	GATC	2 cut(s)	1374, 1580
DpnII	GATC	2 cut(s)	1372, 1578
Eam1104I	CTCTTC	6 cut(s)	43, 71, 102, 218, 840, 1539
EarI	CTCTTC	6 cut(s)	43, 71, 102, 218, 840, 1539
EciI	GGCGGA	1 cut(s)	121
Ecl136II	GAGCTC	1 cut(s)	295
Eco130I	CCWWGG	2 cut(s)	556, 759
Eco24I	GRGCYC	2 cut(s)	297, 1212
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	2 cut(s)	553, 577
Eco53kI	GAGCTC	1 cut(s)	295
Eco57I	CTGAAG	3 cut(s)	1305, 1321, 1563
Eco72I	CACGTG	1 cut(s)	345
EcoICRI	GAGCTC	1 cut(s)	295
EcoRI	GAATTC	1 cut(s)	1088
EcoRII	CCWGG	2 cut(s)	667, 915
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	2 cut(s)	556, 759
EcoT38I	GRGCYC	2 cut(s)	297, 1212
EgeI	GGCGCC	3 cut(s)	181, 226, 274
EheI	GGCGCC	3 cut(s)	181, 226, 274
ErhI	CCWWGG	2 cut(s)	556, 759
FaeI	CATG	7 cut(s)	407, 461, 806, 992, 1348, 1387, 1435
FalI	AAGNNNNNCTT	4 cut(s)	1263, 1295, 1490, 1522
FatI	CATG	7 cut(s)	403, 457, 802, 988, 1344, 1383, 1431
FauI	CCCGC	4 cut(s)	146, 200, 260, 588
FblI	GTMKAC	1 cut(s)	1012
FokI	GGATG	1 cut(s)	372
FriOI	GRGCYC	2 cut(s)	297, 1212
FspBI	CTAG	1 cut(s)	618
GlaI	GCGC	8 cut(s)	148, 163, 181, 226, 274, 503, 1180, 1231
GsaI	CCCAGC	1 cut(s)	1258
GsuI	CTGGAG	2 cut(s)	484, 1140
HaeII	RGCGCY	4 cut(s)	183, 228, 276, 505
HaeIII	GGCC	4 cut(s)	248, 561, 1342, 1352
HapII	CCGG	4 cut(s)	228, 244, 327, 722
HgaI	GACGC	3 cut(s)	138, 229, 322
HhaI	GCGC	8 cut(s)	149, 164, 182, 227, 275, 504, 1181, 1232
Hin1I	GRCGYC	5 cut(s)	180, 225, 240, 273, 333
Hin1II	CATG	7 cut(s)	407, 461, 806, 992, 1348, 1387, 1435
Hin6I	GCGC	8 cut(s)	147, 162, 180, 225, 273, 502, 1179, 1230
HinP1I	GCGC	8 cut(s)	147, 162, 180, 225, 273, 502, 1179, 1230
HindIII	AAGCTT	1 cut(s)	77
HinfI	GANTC	9 cut(s)	185, 689, 908, 1147, 1153, 1234, 1377, 1445, 1564
HpaII	CCGG	4 cut(s)	228, 244, 327, 722
HphI	GGTGA	6 cut(s)	113, 208, 1063, 1322, 1440, 1520
Hpy166II	GTNNAC	3 cut(s)	385, 577, 1013
Hpy188III	TCNNGA	5 cut(s)	532, 659, 704, 1384, 1601
Hpy8I	GTNNAC	3 cut(s)	385, 577, 1013
Hpy99I	CGWCG	3 cut(s)	176, 179, 338
HpyAV	CCTTC	4 cut(s)	310, 1166, 1248, 1342
HpyCH4III	ACNGT	2 cut(s)	589, 973
HpyCH4IV	ACGT	1 cut(s)	344
HpyCH4V	TGCA	5 cut(s)	499, 1001, 1403, 1429, 1472
HpyF10VI	GCNNNNNNNGC	8 cut(s)	231, 237, 281, 336, 339, 373, 718, 1484
HpyF3I	CTNAG	7 cut(s)	447, 492, 714, 788, 1360, 1507, 1599
HpySE526I	ACGT	1 cut(s)	344
Hsp92I	GRCGYC	5 cut(s)	180, 225, 240, 273, 333
Hsp92II	CATG	7 cut(s)	407, 461, 806, 992, 1348, 1387, 1435
HspAI	GCGC	8 cut(s)	147, 162, 180, 225, 273, 502, 1179, 1230
KasI	GGCGCC	3 cut(s)	179, 224, 272
KroI	GCCGGC	1 cut(s)	227
KroNI	GCCGGC	1 cut(s)	229
KspI	CCGCGG	1 cut(s)	565
Kzo9I	GATC	2 cut(s)	1372, 1578
LmnI	GCTCC	4 cut(s)	134, 300, 465, 1070
Lsp1109I	GCAGC	5 cut(s)	243, 483, 511, 685, 1612
LweI	GCATC	2 cut(s)	685, 1501
MaeI	CTAG	1 cut(s)	618
MaeII	ACGT	1 cut(s)	344
MaeIII	GTNAC	3 cut(s)	544, 1132, 1552
MalI	GATC	2 cut(s)	1374, 1580
MbiI	CCGCTC	1 cut(s)	129
MboI	GATC	2 cut(s)	1372, 1578
MhlI	GDGCHC	5 cut(s)	297, 369, 470, 531, 1212
MluCI	AATT	8 cut(s)	265, 407, 630, 1027, 1056, 1088, 1113, 1455
Mly113I	GGCGCC	3 cut(s)	180, 225, 273
MlyI	GAGTC	4 cut(s)	179, 917, 1147, 1558
MmeI	TCCRAC	3 cut(s)	195, 342, 955
MroNI	GCCGGC	1 cut(s)	227
MroXI	GAANNNNTTC	1 cut(s)	1458
MseI	TTAA	2 cut(s)	926, 1482
MslI	CAYNNNNRTG	2 cut(s)	347, 473
MspA1I	CMGCKG	5 cut(s)	234, 564, 935, 1541, 1631
MspI	CCGG	4 cut(s)	228, 244, 327, 722
MspR9I	CCNGG	4 cut(s)	245, 669, 723, 917
Mva1269I	GAATGC	2 cut(s)	493, 541
MvaI	CCWGG	2 cut(s)	669, 917
MvnI	CGCG	5 cut(s)	147, 149, 162, 564, 1232
MwoI	GCNNNNNNNGC	8 cut(s)	231, 237, 281, 336, 339, 373, 718, 1484
NaeI	GCCGGC	1 cut(s)	229
NarI	GGCGCC	3 cut(s)	180, 225, 273
NciI	CCSGG	2 cut(s)	245, 723
NdeII	GATC	2 cut(s)	1372, 1578
NgoMIV	GCCGGC	1 cut(s)	227
NlaIII	CATG	7 cut(s)	407, 461, 806, 992, 1348, 1387, 1435
NlaIV	GGNNCC	5 cut(s)	181, 226, 274, 579, 1107
NmuCI	GTSAC	2 cut(s)	544, 1552
NspI	RCATGY	2 cut(s)	992, 1435
NspV	TTCGAA	1 cut(s)	392
OliI	CACNNNNGTG	1 cut(s)	347
PagI	TCATGA	1 cut(s)	1383
PciI	ACATGT	2 cut(s)	988, 1431
PcsI	WCGNNNNNNNCGW	2 cut(s)	180, 288
PctI	GAATGC	2 cut(s)	493, 541
PdiI	GCCGGC	1 cut(s)	229
PdmI	GAANNNNTTC	1 cut(s)	1458
PfeI	GAWTC	5 cut(s)	689, 1147, 1234, 1377, 1445
PflMI	CCANNNNNTGG	1 cut(s)	1265
PfoI	TCCNGGA	1 cut(s)	667
PleI	GAGTC	4 cut(s)	179, 916, 1147, 1558
PluTI	GGCGCC	3 cut(s)	183, 228, 276
PmaCI	CACGTG	1 cut(s)	345
PmlI	CACGTG	1 cut(s)	345
PpsI	GAGTC	4 cut(s)	179, 916, 1147, 1558
Ppu21I	YACGTR	1 cut(s)	345
PscI	ACATGT	2 cut(s)	988, 1431
Psp124BI	GAGCTC	1 cut(s)	297
Psp6I	CCWGG	2 cut(s)	667, 915
PspCI	CACGTG	1 cut(s)	345
PspFI	CCCAGC	1 cut(s)	1254
PspGI	CCWGG	2 cut(s)	667, 915
PspN4I	GGNNCC	5 cut(s)	181, 226, 274, 579, 1107
PspPI	GGNCC	4 cut(s)	246, 553, 577, 1341
PstI	CTGCAG	1 cut(s)	501
PstNI	CAGNNNCTG	2 cut(s)	1478, 1541
PvuII	CAGCTG	1 cut(s)	935
RsaI	GTAC	3 cut(s)	440, 680, 1099
RsaNI	GTAC	3 cut(s)	439, 679, 1098
RseI	CAYNNNNRTG	2 cut(s)	347, 473
SacI	GAGCTC	1 cut(s)	297
SacII	CCGCGG	1 cut(s)	565
SaqAI	TTAA	2 cut(s)	926, 1482
Sau3AI	GATC	2 cut(s)	1372, 1578
Sau96I	GGNCC	4 cut(s)	246, 553, 577, 1341
SchI	GAGTC	4 cut(s)	179, 917, 1147, 1558
ScrFI	CCNGG	4 cut(s)	245, 669, 723, 917
SduI	GDGCHC	5 cut(s)	297, 369, 470, 531, 1212
SfaNI	GCATC	2 cut(s)	685, 1501
SfcI	CTRYAG	2 cut(s)	497, 1296
SfoI	GGCGCC	3 cut(s)	181, 226, 274
Sfr303I	CCGCGG	1 cut(s)	565
SfuI	TTCGAA	1 cut(s)	392
SgrAI	CRCCGGYG	1 cut(s)	326
SgrBI	CCGCGG	1 cut(s)	565
SinI	GGWCC	2 cut(s)	553, 577
SmiMI	CAYNNNNRTG	2 cut(s)	347, 473
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
Sse9I	AATT	8 cut(s)	265, 407, 630, 1027, 1056, 1088, 1113, 1455
SspDI	GGCGCC	3 cut(s)	179, 224, 272
SspMI	CTAG	1 cut(s)	618
SstI	GAGCTC	1 cut(s)	297
StyD4I	CCNGG	4 cut(s)	243, 667, 721, 915
StyI	CCWWGG	2 cut(s)	556, 759
TaaI	ACNGT	2 cut(s)	589, 973
TaiI	ACGT	1 cut(s)	347
TaqI	TCGA	3 cut(s)	207, 392, 1375
TaqII	GACCGA	1 cut(s)	1155
TasI	AATT	8 cut(s)	265, 407, 630, 1027, 1056, 1088, 1113, 1455
TfiI	GAWTC	5 cut(s)	689, 1147, 1234, 1377, 1445
Tru1I	TTAA	2 cut(s)	926, 1482
Tru9I	TTAA	2 cut(s)	926, 1482
TscAI	CASTG	2 cut(s)	283, 514
TseFI	GTSAC	2 cut(s)	544, 1552
TseI	GCWGC	6 cut(s)	9, 231, 496, 499, 698, 1625
Tsp45I	GTSAC	2 cut(s)	544, 1552
TspDTI	ATGAA	7 cut(s)	420, 858, 933, 1101, 1361, 1372, 1400
TspRI	CASTG	2 cut(s)	283, 514
Van91I	CCANNNNNTGG	1 cut(s)	1265
VpaK11BI	GGWCC	2 cut(s)	553, 577
XapI	RAATTY	3 cut(s)	407, 1027, 1088
XceI	RCATGY	2 cut(s)	992, 1435
XcmI	CCANNNNNNNNNTGG	2 cut(s)	376, 1262
XmiI	GTMKAC	1 cut(s)	1012
XmnI	GAANNNNTTC	1 cut(s)	1458
XspI	CTAG	1 cut(s)	618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.