RchiOBHm_Chr6g0296391

Lethal(2) giant larvae protein homolog

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
58140652 .. 58144205
3554 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26605

Sequence Viewer

Length: 162 bp
ATGTTAAAGGGCCCATTAAACTTACAGATTTTGGATTTGTACAAAAGTGAATGCAGGGATGGAAGGATAAAAGTGGTCGGGGGTGACAATATTGAAGGGCTTCTGATATCTCCTGAGCCATTGGCTTTAAATACTTGTAATTTTACTTCATATTGCATGTGA

Protein Analysis

53

Amino Acids

5.86

Weight (kDa)

4.99

Isoelectric Point (pI)

59.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017284)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 41
AgsI TTSAA 1 cut(s) 95
AoxI GGCC 1 cut(s) 10
ApaI GGGCCC 1 cut(s) 14
Asp700I GAANNNNTTC 1 cut(s) 99
AspS9I GGNCC 2 cut(s) 10, 11
AsuHPI GGTGA 1 cut(s) 95
BaeGI GKGCMC 1 cut(s) 14
BanII GRGCYC 1 cut(s) 14
BarI GAAGNNNNNNTAC 2 cut(s) 130, 162
BccI CCATC 1 cut(s) 53
BmgT120I GGNCC 2 cut(s) 10, 11
BmiI GGNNCC 1 cut(s) 12
Bpu10I CCTNAGC 1 cut(s) 114
BseGI GGATG 1 cut(s) 64
BseMII CTCAG 1 cut(s) 105
BseSI GKGCMC 1 cut(s) 14
BshFI GGCC 1 cut(s) 12
BsmI GAATGC 1 cut(s) 56
BsnI GGCC 1 cut(s) 12
Bsp120I GGGCCC 1 cut(s) 10
Bsp1286I GDGCHC 1 cut(s) 14
Bsp1407I TGTACA 1 cut(s) 39
BspANI GGCC 1 cut(s) 12
BspCNI CTCAG 1 cut(s) 106
BspLI GGNNCC 1 cut(s) 12
BsrGI TGTACA 1 cut(s) 39
BstAUI TGTACA 1 cut(s) 39
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 64
BstNSI RCATGY 1 cut(s) 160
BstSLI GKGCMC 1 cut(s) 14
BsuRI GGCC 1 cut(s) 12
BtsCI GGATG 1 cut(s) 64
Cfr13I GGNCC 2 cut(s) 10, 11
Csp6I GTAC 1 cut(s) 40
CviAII CATG 1 cut(s) 157
CviJI RGCY 4 cut(s) 12, 100, 118, 125
CviKI_1 RGCY 4 cut(s) 12, 100, 118, 125
CviQI GTAC 1 cut(s) 40
DdeI CTNAG 1 cut(s) 114
DraI TTTAAA 1 cut(s) 129
Eco24I GRGCYC 1 cut(s) 14
Eco32I GATATC 1 cut(s) 108
EcoO109I RGGNCCY 1 cut(s) 10
EcoRV GATATC 1 cut(s) 108
EcoT38I GRGCYC 1 cut(s) 14
FaeI CATG 1 cut(s) 160
FaiI YATR 2 cut(s) 151, 158
FatI CATG 1 cut(s) 156
FokI GGATG 1 cut(s) 71
FriOI GRGCYC 1 cut(s) 14
HaeIII GGCC 1 cut(s) 12
Hin1II CATG 1 cut(s) 160
HphI GGTGA 1 cut(s) 95
Hpy188I TCNGA 1 cut(s) 105
Hpy188III TCNNGA 1 cut(s) 113
HpyAV CCTTC 2 cut(s) 57, 89
HpyCH4V TGCA 2 cut(s) 54, 156
HpyF3I CTNAG 1 cut(s) 114
Hsp92II CATG 1 cut(s) 160
LpnPI CCDG 2 cut(s) 40, 126
MaeIII GTNAC 1 cut(s) 83
MhlI GDGCHC 1 cut(s) 14
MluCI AATT 1 cut(s) 139
MroXI GAANNNNTTC 1 cut(s) 99
MseI TTAA 3 cut(s) 5, 17, 128
Mva1269I GAATGC 1 cut(s) 56
NlaIII CATG 1 cut(s) 160
NlaIV GGNNCC 1 cut(s) 12
NmuCI GTSAC 1 cut(s) 83
NspI RCATGY 1 cut(s) 160
PctI GAATGC 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 99
PspN4I GGNNCC 1 cut(s) 12
PspOMI GGGCCC 1 cut(s) 10
PspPI GGNCC 2 cut(s) 10, 11
RsaI GTAC 1 cut(s) 41
RsaNI GTAC 1 cut(s) 40
SaqAI TTAA 3 cut(s) 5, 17, 128
Sau96I GGNCC 2 cut(s) 10, 11
SduI GDGCHC 1 cut(s) 14
SgeI CNNG 4 cut(s) 67, 91, 125, 147
Sse9I AATT 1 cut(s) 139
SspI AATATT 1 cut(s) 91
TasI AATT 1 cut(s) 139
TatI WGTACW 1 cut(s) 39
Tru1I TTAA 3 cut(s) 5, 17, 128
Tru9I TTAA 3 cut(s) 5, 17, 128
TseFI GTSAC 1 cut(s) 83
Tsp45I GTSAC 1 cut(s) 83
TspDTI ATGAA 1 cut(s) 138
XceI RCATGY 1 cut(s) 160
XmnI GAANNNNTTC 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.